RNA–Protein interactions for RNA: YKR101W

SIR1, Transcript of Protein involved in silencing at mating-type loci HML and HMR, yeastyeast

Gene SIR1, Length 1,965 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR1YKR101W PRE6P40303 254 aaKnown RBP3.51□□□□□ -1.85
SIR1YKR101W SLX9P53251 210 aaPredicted RBP3.51□□□□□ -1.85
SIR1YKR101W YNL046WP53956 172 aa3.51□□□□□ -1.85
SIR1YKR101W INM2Q05533 292 aa3.51□□□□□ -1.85
SIR1YKR101W RRP40Q08285 240 aaKnown RBP3.51□□□□□ -1.85
SIR1YKR101W MSA1Q08471 629 aa3.51□□□□□ -1.85
SIR1YKR101W YOR186WQ08560 144 aa3.51□□□□□ -1.85
SIR1YKR101W SPT3P06844 337 aa3.51□□□□□ -1.85
SIR1YKR101W SRY1P36007 326 aa3.51□□□□□ -1.85
SIR1YKR101W SCW10Q04951 389 aa3.51□□□□□ -1.85
SIR1YKR101W ABP140Q08641 628 aaKnown RBP3.51□□□□□ -1.85
SIR1YKR101W UTP10P42945 1769 aaKnown RBP3.5□□□□□ -1.85
SIR1YKR101W PPH21P23594 369 aa3.5□□□□□ -1.85
SIR1YKR101W LDB16P25587 256 aa3.5□□□□□ -1.85
SIR1YKR101W RME1P32338 300 aaKnown RBP3.5□□□□□ -1.85
SIR1YKR101W YHL044WP38727 235 aa3.5□□□□□ -1.85
SIR1YKR101W IKI1P38874 309 aa3.5□□□□□ -1.85
SIR1YKR101W MCM22P47167 239 aa3.5□□□□□ -1.85
SIR1YKR101W NKP2Q06162 153 aa3.5□□□□□ -1.85
SIR1YKR101W CLP1Q08685 445 aaPredicted RBP3.5□□□□□ -1.85
SIR1YKR101W YPR011CQ12251 326 aa3.5□□□□□ -1.85
SIR1YKR101W JLP1Q12358 412 aa3.5□□□□□ -1.85
SIR1YKR101W RAD50P12753 1312 aa3.5□□□□□ -1.85
SIR1YKR101W TUS1Q06412 1307 aa3.5□□□□□ -1.85
SIR1YKR101W RPL28P02406 149 aaKnown RBP3.49□□□□□ -1.85
SIR1YKR101W IDH1P28834 360 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
SIR1YKR101W SMD1Q02260 146 aaPredicted RBP3.49□□□□□ -1.85
SIR1YKR101W EMI1Q04406 187 aa3.49□□□□□ -1.85
SIR1YKR101W MCH1Q07376 486 aa3.49□□□□□ -1.85
SIR1YKR101W TPO4Q12256 659 aa3.49□□□□□ -1.85
SIR1YKR101W TIM22Q12328 207 aa3.49□□□□□ -1.85
SIR1YKR101W YHR139C-AO13536 103 aa3.49□□□□□ -1.85
SIR1YKR101W ERD2P18414 219 aa3.49□□□□□ -1.85
SIR1YKR101W SSO1P32867 290 aa3.49□□□□□ -1.85
SIR1YKR101W SEO1P39709 593 aa3.49□□□□□ -1.85
SIR1YKR101W NUP57P48837 541 aa3.49□□□□□ -1.85
SIR1YKR101W YDR222WQ04925 415 aa3.49□□□□□ -1.85
SIR1YKR101W NNT1Q05874 261 aa3.49□□□□□ -1.85
SIR1YKR101W YPS3Q12303 508 aa3.49□□□□□ -1.85
SIR1YKR101W QCR7P00128 127 aa3.48□□□□□ -1.85
SIR1YKR101W MRPL39P36533 70 aa3.48□□□□□ -1.85
SIR1YKR101W YHB1P39676 399 aaKnown RBP3.48□□□□□ -1.85
SIR1YKR101W RPE1P46969 238 aa3.48□□□□□ -1.85
SIR1YKR101W HEM25Q07534 307 aa3.48□□□□□ -1.85
SIR1YKR101W YOL019WQ08157 551 aa3.48□□□□□ -1.85
SIR1YKR101W SYC1Q08553 188 aaPredicted RBP3.48□□□□□ -1.85
SIR1YKR101W YBL008W-AQ3E821 79 aa3.48□□□□□ -1.85
SIR1YKR101W YOX1P34161 385 aa3.47□□□□□ -1.85
SIR1YKR101W YJL028WP47062 111 aa3.47□□□□□ -1.85
SIR1YKR101W NSA1P53136 463 aaPredicted RBP3.47□□□□□ -1.85
SIR1YKR101W YGR067CP53243 804 aa3.47□□□□□ -1.85
SIR1YKR101W SYF2P53277 215 aaPredicted RBP3.47□□□□□ -1.85
SIR1YKR101W CDD1Q06549 142 aa3.47□□□□□ -1.85
SIR1YKR101W CPT1P17898 393 aa3.47□□□□□ -1.85
SIR1YKR101W YHI9P38765 294 aa3.47□□□□□ -1.85
SIR1YKR101W YMR144WP40214 342 aaKnown RBP3.47□□□□□ -1.85
SIR1YKR101W COQ5P49017 307 aa3.47□□□□□ -1.85
SIR1YKR101W YPL264CQ08980 353 aa3.47□□□□□ -1.85
SIR1YKR101W PMD1P32634 1753 aa3.46□□□□□ -1.85
SIR1YKR101W RPL27AP0C2H6 136 aaKnown RBP3.46□□□□□ -1.86
SIR1YKR101W RPL27BP0C2H7 136 aaKnown RBP3.46□□□□□ -1.86
SIR1YKR101W URA6P15700 204 aa3.46□□□□□ -1.86
SIR1YKR101W DBF2P22204 572 aa3.45□□□□□ -1.86
SIR1YKR101W BMT5P40493 336 aa3.45□□□□□ -1.86
SIR1YKR101W OST3P48439 350 aa3.45□□□□□ -1.86
SIR1YKR101W BRR6P53062 197 aa3.45□□□□□ -1.86
SIR1YKR101W GOT1Q03554 138 aa3.45□□□□□ -1.86
SIR1YKR101W TVP15Q03860 143 aa3.45□□□□□ -1.86
SIR1YKR101W YDR124WQ04608 324 aa3.45□□□□□ -1.86
SIR1YKR101W FAR8Q05040 523 aa3.45□□□□□ -1.86
SIR1YKR101W SMD2Q06217 110 aaKnown RBP3.45□□□□□ -1.86
SIR1YKR101W YLR179CQ06252 201 aaKnown RBP3.45□□□□□ -1.86
SIR1YKR101W MRX4Q12467 430 aa3.45□□□□□ -1.86
SIR1YKR101W ECM13P38195 257 aa3.45□□□□□ -1.86
SIR1YKR101W GET1P53192 235 aa3.45□□□□□ -1.86
SIR1YKR101W FYV6P53913 173 aa3.45□□□□□ -1.86
SIR1YKR101W GRE1Q08969 168 aa3.45□□□□□ -1.86
SIR1YKR101W FAS2P19097 1887 aaKnown RBP3.45□□□□□ -1.86
SIR1YKR101W COX5AP00424 153 aa3.44□□□□□ -1.86
SIR1YKR101W PEX17P40155 199 aa3.44□□□□□ -1.86
SIR1YKR101W RMR1P53060 241 aa3.44□□□□□ -1.86
SIR1YKR101W YPL247CQ12523 523 aa3.44□□□□□ -1.86
SIR1YKR101W CDC28P00546 298 aaKnown RBP3.43□□□□□ -1.86
SIR1YKR101W TOM40P23644 387 aaKnown RBP3.43□□□□□ -1.86
SIR1YKR101W TRM7P38238 310 aaKnown RBP3.43□□□□□ -1.86
SIR1YKR101W IRC18P47056 224 aa3.43□□□□□ -1.86
SIR1YKR101W MRX8Q05473 314 aa3.43□□□□□ -1.86
SIR1YKR101W MET2P08465 486 aa3.43□□□□□ -1.86
SIR1YKR101W CKA2P19454 339 aa3.43□□□□□ -1.86
SIR1YKR101W SPS18P32572 300 aa3.43□□□□□ -1.86
SIR1YKR101W OPY1P38271 328 aa3.43□□□□□ -1.86
SIR1YKR101W PRR2Q12310 699 aa3.43□□□□□ -1.86
SIR1YKR101W HKR1P41809 1802 aa3.42□□□□□ -1.86
SIR1YKR101W YAK1P14680 807 aa3.42□□□□□ -1.86
SIR1YKR101W YCR087C-AP37263 153 aa3.42□□□□□ -1.86
SIR1YKR101W SLX1P38324 304 aa3.42□□□□□ -1.86
SIR1YKR101W SUR2P38992 349 aa3.42□□□□□ -1.86
SIR1YKR101W YFL012WP43580 148 aa3.42□□□□□ -1.86
SIR1YKR101W MDM34P53083 459 aa3.42□□□□□ -1.86
SIR1YKR101W FIG2P25653 1609 aa3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms