RNA–Protein interactions for RNA: YJL010C

NOP9, Transcript of Essential subunit of U3-containing 90S preribosome, yeast

Gene NOP9, Length 2,001 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NOP9	YJL010C	RPL24B	P24000	155 aa	Known RBP	0.48	□□□□□ -2.33
NOP9	YJL010C	PPA2	P28239	310 aa		0.48	□□□□□ -2.33
NOP9	YJL010C	BMH2	P34730	273 aa	Known RBP	0.48	□□□□□ -2.33
NOP9	YJL010C	YKR045C	P36138	183 aa		0.48	□□□□□ -2.33
NOP9	YJL010C	DOG2	P38773	246 aa		0.48	□□□□□ -2.33
NOP9	YJL010C	DOG1	P38774	246 aa		0.48	□□□□□ -2.33
NOP9	YJL010C	AST2	P39945	430 aa	Known RBP	0.48	□□□□□ -2.33
NOP9	YJL010C	PRE6	P40303	254 aa	Known RBP	0.48	□□□□□ -2.33
NOP9	YJL010C	AGE2	P40529	298 aa		0.48	□□□□□ -2.33
NOP9	YJL010C	YKE4	P40544	346 aa		0.48	□□□□□ -2.33
NOP9	YJL010C	HOC1	P47124	396 aa		0.48	□□□□□ -2.33
NOP9	YJL010C	NUP84	P52891	726 aa		0.48	□□□□□ -2.33
NOP9	YJL010C	FYV6	P53913	173 aa		0.48	□□□□□ -2.33
NOP9	YJL010C	YNL046W	P53956	172 aa		0.48	□□□□□ -2.33
NOP9	YJL010C	NIP7	Q08962	181 aa	Known RBP	0.48	□□□□□ -2.33
NOP9	YJL010C	UBR2	Q07963	1872 aa		0.48	□□□□□ -2.33
NOP9	YJL010C	RPF1	P38805	295 aa	Known RBP	0.47	□□□□□ -2.33
NOP9	YJL010C	RMD6	P39975	231 aa		0.47	□□□□□ -2.33
NOP9	YJL010C	PGD1	P40356	397 aa		0.47	□□□□□ -2.33
NOP9	YJL010C	SMD3	P43321	101 aa	Known RBP	0.47	□□□□□ -2.33
NOP9	YJL010C	AIF1	P52923	378 aa		0.47	□□□□□ -2.33
NOP9	YJL010C	BUD25	P85052	153 aa		0.47	□□□□□ -2.33
NOP9	YJL010C	SRL4	Q03085	281 aa		0.47	□□□□□ -2.33
NOP9	YJL010C	CDC123	Q05791	360 aa		0.47	□□□□□ -2.33
NOP9	YJL010C	MSA1	Q08471	629 aa		0.47	□□□□□ -2.33
NOP9	YJL010C	DCN1	Q12395	269 aa		0.47	□□□□□ -2.33
NOP9	YJL010C	ATG31	Q12421	196 aa		0.47	□□□□□ -2.33
NOP9	YJL010C	TUS1	Q06412	1307 aa		0.47	□□□□□ -2.33
NOP9	YJL010C	CDC7	P06243	507 aa		0.47	□□□□□ -2.33
NOP9	YJL010C	BCY1	P07278	416 aa	Known RBP	0.47	□□□□□ -2.33
NOP9	YJL010C	MATALPHA1	P0CY06	175 aa		0.47	□□□□□ -2.33
NOP9	YJL010C	HMLALPHA1	P0CY07	175 aa		0.47	□□□□□ -2.33
NOP9	YJL010C	NHP6B	P11633	99 aa	Known RBP	0.47	□□□□□ -2.33
NOP9	YJL010C	URA6	P15700	204 aa		0.47	□□□□□ -2.33
NOP9	YJL010C	VPS21	P36017	210 aa	Known RBP	0.47	□□□□□ -2.33
NOP9	YJL010C	MRPL28	P36527	147 aa		0.47	□□□□□ -2.33
NOP9	YJL010C	YBR219C	P38317	127 aa		0.47	□□□□□ -2.33
NOP9	YJL010C	MIC12	P38341	106 aa		0.47	□□□□□ -2.33
NOP9	YJL010C	MCM22	P47167	239 aa		0.47	□□□□□ -2.33
NOP9	YJL010C	PRM8	P53174	237 aa		0.47	□□□□□ -2.33
NOP9	YJL010C	SAY1	P53324	424 aa		0.47	□□□□□ -2.33
NOP9	YJL010C	YDR248C	Q03786	193 aa		0.47	□□□□□ -2.33
NOP9	YJL010C	TPO4	Q12256	659 aa		0.47	□□□□□ -2.33
NOP9	YJL010C	PET9	P18239	318 aa	Known RBP	0.46	□□□□□ -2.34
NOP9	YJL010C	ERD2	P18414	219 aa		0.46	□□□□□ -2.34
NOP9	YJL010C	EHD3	P28817	500 aa		0.46	□□□□□ -2.34
NOP9	YJL010C	VMA6	P32366	345 aa	Known RBP	0.46	□□□□□ -2.34
NOP9	YJL010C	YET1	P35723	206 aa		0.46	□□□□□ -2.34
NOP9	YJL010C	ECM33	P38248	429 aa	Known RBP	0.46	□□□□□ -2.34
NOP9	YJL010C	YHR180W	P38868	163 aa		0.46	□□□□□ -2.34
NOP9	YJL010C	PEX17	P40155	199 aa		0.46	□□□□□ -2.34
NOP9	YJL010C	RSM25	P40496	264 aa		0.46	□□□□□ -2.34
NOP9	YJL010C	EAF6	P47128	113 aa		0.46	□□□□□ -2.34
NOP9	YJL010C	BXI1	P48558	297 aa		0.46	□□□□□ -2.34
NOP9	YJL010C	GAS3	Q03655	524 aa		0.46	□□□□□ -2.34
NOP9	YJL010C	JLP1	Q12358	412 aa		0.46	□□□□□ -2.34
NOP9	YJL010C	YIL177C	P40434	1758 aa		0.46	□□□□□ -2.34
NOP9	YJL010C	YJL225C	P40889	1758 aa		0.46	□□□□□ -2.34
NOP9	YJL010C	CDC28	P00546	298 aa	Known RBP	0.45	□□□□□ -2.34
NOP9	YJL010C	RHO1	P06780	209 aa	Known RBP	0.45	□□□□□ -2.34
NOP9	YJL010C	GRX2	P17695	143 aa	Known RBP	0.45	□□□□□ -2.34
NOP9	YJL010C	STE18	P18852	110 aa		0.45	□□□□□ -2.34
NOP9	YJL010C	YMR31	P19955	123 aa		0.45	□□□□□ -2.34
NOP9	YJL010C	MGM101	P32787	269 aa	Known RBP	0.45	□□□□□ -2.34
NOP9	YJL010C	FZF1	P32805	299 aa		0.45	□□□□□ -2.34
NOP9	YJL010C	PTM1	P32857	523 aa		0.45	□□□□□ -2.34
NOP9	YJL010C	RPT5	P33297	434 aa	Known RBP	0.45	□□□□□ -2.34
NOP9	YJL010C	APS1	P35181	156 aa		0.45	□□□□□ -2.34
NOP9	YJL010C	YKL075C	P36083	450 aa		0.45	□□□□□ -2.34
NOP9	YJL010C	POP4	P38336	279 aa		0.45	□□□□□ -2.34
NOP9	YJL010C	CTR2	P38865	189 aa		0.45	□□□□□ -2.34
NOP9	YJL010C	AVT2	P39981	480 aa		0.45	□□□□□ -2.34
NOP9	YJL010C	GLE2	P40066	365 aa		0.45	□□□□□ -2.34
NOP9	YJL010C	YNL217W	P40152	326 aa		0.45	□□□□□ -2.34
NOP9	YJL010C	TIR3	P40552	269 aa		0.45	□□□□□ -2.34
NOP9	YJL010C	TOS8	P53147	276 aa		0.45	□□□□□ -2.34
NOP9	YJL010C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	0.45	□□□□□ -2.34	not detected
NOP9	YJL010C	LPP1	Q04396	274 aa		0.45	□□□□□ -2.34
NOP9	YJL010C	SML1	Q04964	104 aa		0.45	□□□□□ -2.34
NOP9	YJL010C	YLR283W	Q05867	314 aa		0.45	□□□□□ -2.34
NOP9	YJL010C	YPL162C	Q12042	273 aa		0.45	□□□□□ -2.34
NOP9	YJL010C	MDM32	Q12171	622 aa		0.45	□□□□□ -2.34
NOP9	YJL010C	TSC3	Q3E790	80 aa		0.45	□□□□□ -2.34
NOP9	YJL010C	TDA8	Q6B2U8	126 aa		0.45	□□□□□ -2.34
NOP9	YJL010C	THP2	O13539	261 aa	Known RBP	0.45	□□□□□ -2.34
NOP9	YJL010C	QCR8	P08525	94 aa		0.45	□□□□□ -2.34
NOP9	YJL010C	YBR121C-A	P0C5L4	52 aa		0.45	□□□□□ -2.34
NOP9	YJL010C	FPR1	P20081	114 aa	Known RBP	0.45	□□□□□ -2.34
NOP9	YJL010C	DBF2	P22204	572 aa		0.45	□□□□□ -2.34
NOP9	YJL010C	RPS5	P26783	225 aa	Known RBP	0.45	□□□□□ -2.34
NOP9	YJL010C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	0.45	□□□□□ -2.34	not detected
NOP9	YJL010C	SNC2	P33328	115 aa		0.45	□□□□□ -2.34
NOP9	YJL010C	YER085C	P40058	173 aa		0.45	□□□□□ -2.34
NOP9	YJL010C	ICE2	P40499	491 aa		0.45	□□□□□ -2.34
NOP9	YJL010C	RPA43	P46669	326 aa		0.45	□□□□□ -2.34
NOP9	YJL010C	NUP57	P48837	541 aa		0.45	□□□□□ -2.34
NOP9	YJL010C	MIC26	P50087	233 aa		0.45	□□□□□ -2.34
NOP9	YJL010C	ALG13	P53178	202 aa		0.45	□□□□□ -2.34
NOP9	YJL010C	ARR2	Q06597	130 aa		0.45	□□□□□ -2.34
NOP9	YJL010C	RUD3	Q12234	484 aa	Known RBP	0.45	□□□□□ -2.34

Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms