RNA–Protein interactions for RNA: YER018C

SPC25, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC25, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC25YER018C TIM10P87108 93 aa9.2□□□□□ -0.94
SPC25YER018C MED4Q12343 284 aa9.2□□□□□ -0.94
SPC25YER018C WHI5Q12416 295 aa9.2□□□□□ -0.94
SPC25YER018C MEC1P38111 2368 aa9.2□□□□□ -0.94
SPC25YER018C ARG80P07249 177 aa9.19□□□□□ -0.94
SPC25YER018C YOX1P34161 385 aa9.19□□□□□ -0.94
SPC25YER018C RMD6P39975 231 aa9.19□□□□□ -0.94
SPC25YER018C BNA2P47125 453 aa9.19□□□□□ -0.94
SPC25YER018C CAB5Q03941 241 aa9.19□□□□□ -0.94
SPC25YER018C UPS1Q05776 175 aa9.19□□□□□ -0.94
SPC25YER018C SCP1Q08873 200 aa9.19□□□□□ -0.94
SPC25YER018C FRE8Q12209 686 aa9.19□□□□□ -0.94
SPC25YER018C CKA1P15790 372 aa9.18□□□□□ -0.94
SPC25YER018C MNS1P32906 549 aa9.18□□□□□ -0.94
SPC25YER018C UTP30P36144 274 aaKnown RBP9.18□□□□□ -0.94
SPC25YER018C FLO10P36170 1169 aa9.18□□□□□ -0.94
SPC25YER018C RRF1P38771 230 aa9.18□□□□□ -0.94
SPC25YER018C GAT2P40209 560 aa9.18□□□□□ -0.94
SPC25YER018C GON7P46984 123 aa9.18□□□□□ -0.94
SPC25YER018C CAC2Q04199 468 aa9.18□□□□□ -0.94
SPC25YER018C PRM4Q12498 284 aa9.18□□□□□ -0.94
SPC25YER018C NUM1Q00402 2748 aa9.18□□□□□ -0.94
SPC25YER018C GAL1P04385 528 aa9.17□□□□□ -0.94
SPC25YER018C SEN2P16658 377 aa9.17□□□□□ -0.94
SPC25YER018C YCR016WP25617 290 aaKnown RBP9.17□□□□□ -0.94
SPC25YER018C OSH7P38755 437 aa9.17□□□□□ -0.94
SPC25YER018C YGR210CP42942 411 aa9.17□□□□□ -0.94
SPC25YER018C SOL1P50278 321 aa9.17□□□□□ -0.94
SPC25YER018C NRG1Q03125 231 aa9.17□□□□□ -0.94
SPC25YER018C LIP2Q06005 328 aa9.17□□□□□ -0.94
SPC25YER018C PML1Q07930 204 aaPredicted RBP9.17□□□□□ -0.94
SPC25YER018C FEX2Q08991 375 aa9.17□□□□□ -0.94
SPC25YER018C YOR192C-CQ3E736 78 aa9.17□□□□□ -0.94
SPC25YER018C TFB5Q3E7C1 72 aaPredicted RBP9.17□□□□□ -0.94
SPC25YER018C TRR1P29509 319 aaKnown RBP9.16□□□□□ -0.94
SPC25YER018C RPB7P34087 171 aa9.16□□□□□ -0.94
SPC25YER018C NTC20P38302 140 aaPredicted RBP9.16□□□□□ -0.94
SPC25YER018C AIM46P38885 310 aa9.16□□□□□ -0.94
SPC25YER018C SLM1P40485 686 aa9.16□□□□□ -0.94
SPC25YER018C UBP8P50102 471 aa9.16□□□□□ -0.94
SPC25YER018C YNL046WP53956 172 aa9.16□□□□□ -0.94
SPC25YER018C SMX3P54999 86 aaPredicted RBP9.16□□□□□ -0.94
SPC25YER018C TSA2Q04120 196 aa9.16□□□□□ -0.94
SPC25YER018C FIT1Q04433 528 aa9.16□□□□□ -0.94
SPC25YER018C YDR286CQ05530 114 aa9.16□□□□□ -0.94
SPC25YER018C RTT103Q05543 409 aa9.16□□□□□ -0.94
SPC25YER018C YLR365WQ7LIF2 110 aa9.16□□□□□ -0.94
SPC25YER018C OLE1P21147 510 aaKnown RBP9.15□□□□□ -0.94
SPC25YER018C SUA5P32579 426 aa9.15□□□□□ -0.94
SPC25YER018C VMA8P32610 256 aaKnown RBP9.15□□□□□ -0.94
SPC25YER018C CTR2P38865 189 aa9.15□□□□□ -0.94
SPC25YER018C BFR1P38934 470 aaKnown RBP RIP-Chip data9.15□□□□□ -0.94not detected
SPC25YER018C YER137CP40083 148 aaKnown RBP9.15□□□□□ -0.94
SPC25YER018C BMT5P40493 336 aa9.15□□□□□ -0.94
SPC25YER018C GMC1Q04399 608 aa9.15□□□□□ -0.94
SPC25YER018C VAM3Q12241 283 aa9.15□□□□□ -0.94
SPC25YER018C MIR1P23641 311 aaKnown RBP9.14□□□□□ -0.95
SPC25YER018C SWD2P36104 329 aaPredicted RBP9.14□□□□□ -0.95
SPC25YER018C LAG1P38703 411 aa9.14□□□□□ -0.95
SPC25YER018C MRPL50P53724 139 aa9.14□□□□□ -0.95
SPC25YER018C PLP1Q04004 230 aa9.14□□□□□ -0.95
SPC25YER018C TMC1Q08422 150 aaPredicted RBP9.14□□□□□ -0.95
SPC25YER018C FEX1Q08913 375 aa9.14□□□□□ -0.95
SPC25YER018C RFM1Q12192 310 aa9.14□□□□□ -0.95
SPC25YER018C BBP1Q12365 385 aa9.14□□□□□ -0.95
SPC25YER018C FUS3P16892 353 aaKnown RBP9.13□□□□□ -0.95
SPC25YER018C ACB1P31787 87 aa9.13□□□□□ -0.95
SPC25YER018C VMA22P38784 181 aa9.13□□□□□ -0.95
SPC25YER018C GLR1P41921 483 aaKnown RBP9.13□□□□□ -0.95
SPC25YER018C RPA34P47006 233 aaPredicted RBP9.13□□□□□ -0.95
SPC25YER018C NIF3P53081 288 aa9.13□□□□□ -0.95
SPC25YER018C HSK3P69852 69 aa9.13□□□□□ -0.95
SPC25YER018C MEH1Q02205 184 aa9.13□□□□□ -0.95
SPC25YER018C THI74Q04083 370 aa9.13□□□□□ -0.95
SPC25YER018C YOL118CQ08259 102 aa9.13□□□□□ -0.95
SPC25YER018C PUT1P09368 476 aa9.12□□□□□ -0.95
SPC25YER018C VMA3P25515 160 aa9.12□□□□□ -0.95
SPC25YER018C PAC2P39937 518 aa9.12□□□□□ -0.95
SPC25YER018C PEF1P53238 335 aa9.12□□□□□ -0.95
SPC25YER018C TEX1P53851 422 aaKnown RBP9.12□□□□□ -0.95
SPC25YER018C RIM9Q04734 239 aa9.12□□□□□ -0.95
SPC25YER018C SWT1Q12104 458 aa9.12□□□□□ -0.95
SPC25YER018C YPR108W-AQ3E7B3 70 aa9.12□□□□□ -0.95
SPC25YER018C TPI1P00942 248 aaKnown RBP9.11□□□□□ -0.95
SPC25YER018C YUH1P35127 236 aa9.11□□□□□ -0.95
SPC25YER018C POP2P39008 433 aa9.11□□□□□ -0.95
SPC25YER018C SSO2P39926 295 aa9.11□□□□□ -0.95
SPC25YER018C SGN1P40561 250 aaKnown RBP RIP-Chip data9.11□□□□□ -0.95not detected
SPC25YER018C SBH2P52871 88 aa9.11□□□□□ -0.95
SPC25YER018C DPB4Q04603 196 aaKnown RBP9.11□□□□□ -0.95
SPC25YER018C YLR224WQ05947 369 aa9.11□□□□□ -0.95
SPC25YER018C WSC3Q12215 556 aa9.11□□□□□ -0.95
SPC25YER018C QCR2P07257 368 aa9.1□□□□□ -0.95
SPC25YER018C CKS1P20486 150 aaKnown RBP9.1□□□□□ -0.95
SPC25YER018C YIR035CP40579 254 aa9.1□□□□□ -0.95
SPC25YER018C IRC24P40580 263 aa9.1□□□□□ -0.95
SPC25YER018C PIR5P46999 287 aa9.1□□□□□ -0.95
SPC25YER018C CWC25P53854 179 aaKnown RBP9.1□□□□□ -0.95
SPC25YER018C YCL048W-AQ2V2Q2 79 aa9.1□□□□□ -0.95
SPC25YER018C YMR105W-AQ8TGS8 64 aa9.1□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 199.8 ms