RNA–Protein interactions for RNA: YDR261W-A

YDR261W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YDR261W-A, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR261W-AYDR261W-A MRPL50P53724 139 aa1.44□□□□□ -2.18
YDR261W-AYDR261W-A RRT8Q08219 342 aa1.44□□□□□ -2.18
YDR261W-AYDR261W-A CDC8P00572 216 aa1.43□□□□□ -2.18
YDR261W-AYDR261W-A RIB1P38066 345 aa1.43□□□□□ -2.18
YDR261W-AYDR261W-A YHR139C-AO13536 103 aa1.42□□□□□ -2.18
YDR261W-AYDR261W-A YKL075CP36083 450 aa1.42□□□□□ -2.18
YDR261W-AYDR261W-A RSM25P40496 264 aa1.42□□□□□ -2.18
YDR261W-AYDR261W-A TIR3P40552 269 aa1.42□□□□□ -2.18
YDR261W-AYDR261W-A YNL134CP53912 376 aaKnown RBP1.42□□□□□ -2.18
YDR261W-AYDR261W-A ABF2Q02486 183 aa1.42□□□□□ -2.18
YDR261W-AYDR261W-A YLR162WQ06235 118 aa1.42□□□□□ -2.18
YDR261W-AYDR261W-A PAM18Q07914 168 aa1.42□□□□□ -2.18
YDR261W-AYDR261W-A RPL2AP0CX45 254 aaKnown RBP1.41□□□□□ -2.18
YDR261W-AYDR261W-A RPL2BP0CX46 254 aaKnown RBP1.41□□□□□ -2.18
YDR261W-AYDR261W-A YUH1P35127 236 aa1.41□□□□□ -2.18
YDR261W-AYDR261W-A RPL13BP40212 199 aaKnown RBP1.41□□□□□ -2.18
YDR261W-AYDR261W-A YMD8Q03697 442 aa1.41□□□□□ -2.18
YDR261W-AYDR261W-A RPL13AQ12690 199 aaPredicted RBP1.41□□□□□ -2.18
YDR261W-AYDR261W-A INO80P53115 1489 aa1.41□□□□□ -2.18
YDR261W-AYDR261W-A HOC1P47124 396 aa1.4□□□□□ -2.18
YDR261W-AYDR261W-A KRE28Q04431 385 aa1.4□□□□□ -2.18
YDR261W-AYDR261W-A YPR170W-BP0C5R9 85 aa1.4□□□□□ -2.19
YDR261W-AYDR261W-A MEI4P29467 408 aa1.4□□□□□ -2.19
YDR261W-AYDR261W-A PGD1P40356 397 aa1.4□□□□□ -2.19
YDR261W-AYDR261W-A ICE2P40499 491 aa1.4□□□□□ -2.19
YDR261W-AYDR261W-A YML108WQ03759 105 aa1.4□□□□□ -2.19
YDR261W-AYDR261W-A YLR173WQ06247 608 aa1.4□□□□□ -2.19
YDR261W-AYDR261W-A CUE1P38428 203 aa1.39□□□□□ -2.19
YDR261W-AYDR261W-A GPA2P10823 449 aa1.38□□□□□ -2.19
YDR261W-AYDR261W-A MRPL25P23369 157 aa1.38□□□□□ -2.19
YDR261W-AYDR261W-A FZF1P32805 299 aa1.38□□□□□ -2.19
YDR261W-AYDR261W-A YNL217WP40152 326 aa1.38□□□□□ -2.19
YDR261W-AYDR261W-A AIF1P52923 378 aa1.38□□□□□ -2.19
YDR261W-AYDR261W-A MED4Q12343 284 aa1.38□□□□□ -2.19
YDR261W-AYDR261W-A ATG31Q12421 196 aa1.38□□□□□ -2.19
YDR261W-AYDR261W-A PSF1Q12488 208 aa1.38□□□□□ -2.19
YDR261W-AYDR261W-A UPS2P35200 230 aa1.37□□□□□ -2.19
YDR261W-AYDR261W-A BOL2P53082 120 aa1.37□□□□□ -2.19
YDR261W-AYDR261W-A TRM12Q04235 462 aa1.37□□□□□ -2.19
YDR261W-AYDR261W-A RIO1Q12196 484 aaKnown RBP1.37□□□□□ -2.19
YDR261W-AYDR261W-A QCR8P08525 94 aa1.36□□□□□ -2.19
YDR261W-AYDR261W-A RPL27BP0C2H7 136 aaKnown RBP1.36□□□□□ -2.19
YDR261W-AYDR261W-A MRPS28P21771 286 aa1.36□□□□□ -2.19
YDR261W-AYDR261W-A PEX17P40155 199 aa1.36□□□□□ -2.19
YDR261W-AYDR261W-A MCM22P47167 239 aa1.36□□□□□ -2.19
YDR261W-AYDR261W-A NSA1P53136 463 aaPredicted RBP1.36□□□□□ -2.19
YDR261W-AYDR261W-A SPG3Q04398 127 aaPredicted RBP1.36□□□□□ -2.19
YDR261W-AYDR261W-A MET5P47169 1442 aa1.35□□□□□ -2.19
YDR261W-AYDR261W-A SRB4P32569 687 aa1.35□□□□□ -2.19
YDR261W-AYDR261W-A TRM9P49957 279 aa1.35□□□□□ -2.19
YDR261W-AYDR261W-A YNL010WP53981 241 aaKnown RBP1.35□□□□□ -2.19
YDR261W-AYDR261W-A SNZ1Q03148 297 aa1.35□□□□□ -2.19
YDR261W-AYDR261W-A LSO2Q3E772 92 aaKnown RBP1.35□□□□□ -2.19
YDR261W-AYDR261W-A ATG22P25568 528 aa1.34□□□□□ -2.2
YDR261W-AYDR261W-A DOG2P38773 246 aa1.34□□□□□ -2.2
YDR261W-AYDR261W-A YJR149WP47177 404 aa1.34□□□□□ -2.2
YDR261W-AYDR261W-A CFT1Q06632 1357 aaKnown RBP1.33□□□□□ -2.2
YDR261W-AYDR261W-A TMA19P35691 167 aaKnown RBP1.33□□□□□ -2.2
YDR261W-AYDR261W-A LDB7P38210 180 aa1.33□□□□□ -2.2
YDR261W-AYDR261W-A FMC1P40491 155 aa1.33□□□□□ -2.2
YDR261W-AYDR261W-A YRB2P40517 327 aa1.33□□□□□ -2.2
YDR261W-AYDR261W-A NUP84P52891 726 aa1.33□□□□□ -2.2
YDR261W-AYDR261W-A SAY1P53324 424 aa1.33□□□□□ -2.2
YDR261W-AYDR261W-A DID2P69771 204 aa1.33□□□□□ -2.2
YDR261W-AYDR261W-A LPP1Q04396 274 aa1.33□□□□□ -2.2
YDR261W-AYDR261W-A YPL162CQ12042 273 aa1.33□□□□□ -2.2
YDR261W-AYDR261W-A DRS2P39524 1355 aa1.32□□□□□ -2.2
YDR261W-AYDR261W-A CDC10P25342 322 aaKnown RBP1.32□□□□□ -2.2
YDR261W-AYDR261W-A YET1P35723 206 aa1.32□□□□□ -2.2
YDR261W-AYDR261W-A URA8P38627 578 aaPredicted RBP1.32□□□□□ -2.2
YDR261W-AYDR261W-A IRC22P40006 225 aa1.32□□□□□ -2.2
YDR261W-AYDR261W-A LAP3Q01532 483 aaKnown RBP RIP-Chip data1.32□□□□□ -2.2not detected
YDR261W-AYDR261W-A REP2P03872 296 aa1.31□□□□□ -2.2
YDR261W-AYDR261W-A BCY1P07278 416 aaKnown RBP1.31□□□□□ -2.2
YDR261W-AYDR261W-A GAA1P39012 614 aa1.31□□□□□ -2.2
YDR261W-AYDR261W-A SRL4Q03085 281 aa1.31□□□□□ -2.2
YDR261W-AYDR261W-A YLR156WP0CE96 114 aa1.3□□□□□ -2.2
YDR261W-AYDR261W-A YLR159WP0CE97 114 aa1.3□□□□□ -2.2
YDR261W-AYDR261W-A YLR161WP0CE98 114 aa1.3□□□□□ -2.2
YDR261W-AYDR261W-A YCR016WP25617 290 aaKnown RBP1.3□□□□□ -2.2
YDR261W-AYDR261W-A MRPL28P36527 147 aa1.3□□□□□ -2.2
YDR261W-AYDR261W-A POP4P38336 279 aa1.3□□□□□ -2.2
YDR261W-AYDR261W-A TCD1P38756 429 aa1.3□□□□□ -2.2
YDR261W-AYDR261W-A DOC1P53068 250 aa1.3□□□□□ -2.2
YDR261W-AYDR261W-A YDR248CQ03786 193 aa1.3□□□□□ -2.2
YDR261W-AYDR261W-A ANT1Q06497 328 aa1.3□□□□□ -2.2
YDR261W-AYDR261W-A MATALPHA1P0CY06 175 aa1.29□□□□□ -2.2
YDR261W-AYDR261W-A HMLALPHA1P0CY07 175 aa1.29□□□□□ -2.2
YDR261W-AYDR261W-A NTF2P33331 125 aaKnown RBP1.29□□□□□ -2.2
YDR261W-AYDR261W-A VPS21P36017 210 aaKnown RBP1.29□□□□□ -2.2
YDR261W-AYDR261W-A UMP1P38293 148 aa1.29□□□□□ -2.2
YDR261W-AYDR261W-A YNR077CP53758 84 aa1.29□□□□□ -2.2
YDR261W-AYDR261W-A PET117Q02771 107 aa1.29□□□□□ -2.2
YDR261W-AYDR261W-A RPO26P20435 155 aa1.28□□□□□ -2.2
YDR261W-AYDR261W-A TUS1Q06412 1307 aa1.28□□□□□ -2.2
YDR261W-AYDR261W-A SPT3P06844 337 aa1.27□□□□□ -2.21
YDR261W-AYDR261W-A CPA1P07258 411 aaKnown RBP1.27□□□□□ -2.21
YDR261W-AYDR261W-A URA6P15700 204 aa1.27□□□□□ -2.21
YDR261W-AYDR261W-A TFC1P32367 649 aa1.27□□□□□ -2.21
YDR261W-AYDR261W-A SNC2P33328 115 aa1.27□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 30.8 ms