RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP1	YDR007W	FIG1	P38224	298 aa		5.01	□□□□□ -1.61
TRP1	YDR007W	ATG12	P38316	186 aa		5.01	□□□□□ -1.61
TRP1	YDR007W	YPT35	P38815	214 aa	Known RBP	5.01	□□□□□ -1.61
TRP1	YDR007W	NDT80	P38830	627 aa		5.01	□□□□□ -1.61
TRP1	YDR007W	YJL218W	P40892	196 aa	Known RBP	5.01	□□□□□ -1.61
TRP1	YDR007W	ATG18	P43601	500 aa		5.01	□□□□□ -1.61
TRP1	YDR007W	SCS3	P53012	380 aa		5.01	□□□□□ -1.61
TRP1	YDR007W	YGL185C	P53100	379 aa		5.01	□□□□□ -1.61
TRP1	YDR007W	SLX9	P53251	210 aa	Predicted RBP	5.01	□□□□□ -1.61
TRP1	YDR007W	ALG11	P53954	548 aa	Known RBP	5.01	□□□□□ -1.61
TRP1	YDR007W	RHO3	Q00245	231 aa	Known RBP	5.01	□□□□□ -1.61
TRP1	YDR007W	CUE4	Q04201	117 aa	Predicted RBP	5.01	□□□□□ -1.61
TRP1	YDR007W	TVP18	Q04767	167 aa		5.01	□□□□□ -1.61
TRP1	YDR007W	PBA1	Q05778	276 aa		5.01	□□□□□ -1.61
TRP1	YDR007W	DCR2	Q05924	578 aa		5.01	□□□□□ -1.61
TRP1	YDR007W	RIF2	Q06208	395 aa		5.01	□□□□□ -1.61
TRP1	YDR007W	RRG7	Q08774	242 aa	Predicted RBP	5.01	□□□□□ -1.61
TRP1	YDR007W	MHF2	Q3E829	80 aa		5.01	□□□□□ -1.61
TRP1	YDR007W	YPR014C	Q6B0W2	109 aa		5.01	□□□□□ -1.61
TRP1	YDR007W	RIF1	P29539	1916 aa		5	□□□□□ -1.61
TRP1	YDR007W	MEK1	P24719	497 aa	Predicted RBP	5	□□□□□ -1.61
TRP1	YDR007W	POP5	P28005	173 aa		5	□□□□□ -1.61
TRP1	YDR007W	ATG8	P38182	117 aa	RIP-Chip data	5	□□□□□ -1.61	not detected
TRP1	YDR007W	PRM10	P42946	383 aa		5	□□□□□ -1.61
TRP1	YDR007W	YJR056C	P47115	236 aa		5	□□□□□ -1.61
TRP1	YDR007W	YGL204C	P53089	101 aa		5	□□□□□ -1.61
TRP1	YDR007W	TIM8	P57744	87 aa		5	□□□□□ -1.61
TRP1	YDR007W	TRM44	Q02648	567 aa	Known RBP	5	□□□□□ -1.61
TRP1	YDR007W	GRX5	Q02784	150 aa		5	□□□□□ -1.61
TRP1	YDR007W	DIG2	Q03373	323 aa	Known RBP	5	□□□□□ -1.61
TRP1	YDR007W	ATC1	Q04005	294 aa		5	□□□□□ -1.61
TRP1	YDR007W	YDR124W	Q04608	324 aa		5	□□□□□ -1.61
TRP1	YDR007W	YHC1	Q05900	231 aa	Known RBP	5	□□□□□ -1.61
TRP1	YDR007W	YPR147C	Q06522	304 aa	Known RBP	5	□□□□□ -1.61
TRP1	YDR007W	YPL257W	Q08974	193 aa		5	□□□□□ -1.61
TRP1	YDR007W	FCY22	Q12119	530 aa		5	□□□□□ -1.61
TRP1	YDR007W	YDL199C	Q12407	687 aa		5	□□□□□ -1.61
TRP1	YDR007W	PSF1	Q12488	208 aa		5	□□□□□ -1.61
TRP1	YDR007W	RIM15	P43565	1770 aa		4.99	□□□□□ -1.61
TRP1	YDR007W	NHP6A	P11632	93 aa	Known RBP	4.99	□□□□□ -1.61
TRP1	YDR007W	ERD1	P16151	362 aa		4.99	□□□□□ -1.61
TRP1	YDR007W	ZRC1	P20107	442 aa		4.99	□□□□□ -1.61
TRP1	YDR007W	EPT1	P22140	391 aa		4.99	□□□□□ -1.61
TRP1	YDR007W	AAT2	P23542	418 aa	Known RBP	4.99	□□□□□ -1.61
TRP1	YDR007W	PRE7	P23724	241 aa	Known RBP	4.99	□□□□□ -1.61
TRP1	YDR007W	RBK1	P25332	333 aa		4.99	□□□□□ -1.61
TRP1	YDR007W	RSA4	P25382	515 aa	Known RBP	4.99	□□□□□ -1.61
TRP1	YDR007W	COS9	P36034	407 aa		4.99	□□□□□ -1.61
TRP1	YDR007W	YBR063C	P38083	404 aa		4.99	□□□□□ -1.61
TRP1	YDR007W	YBR013C	P38215	129 aa		4.99	□□□□□ -1.61
TRP1	YDR007W	PTH1	P38876	190 aa	Known RBP	4.99	□□□□□ -1.61
TRP1	YDR007W	HPA3	P39979	161 aa		4.99	□□□□□ -1.61
TRP1	YDR007W	YGL260W	P53056	76 aa		4.99	□□□□□ -1.61
TRP1	YDR007W	ERV29	P53337	310 aa		4.99	□□□□□ -1.61
TRP1	YDR007W	MPA43	P53583	542 aa	Predicted RBP	4.99	□□□□□ -1.61
TRP1	YDR007W	YNL134C	P53912	376 aa	Known RBP	4.99	□□□□□ -1.61
TRP1	YDR007W	YPL245W	Q12179	454 aa	Known RBP	4.99	□□□□□ -1.61
TRP1	YDR007W	MHT1	Q12525	324 aa		4.99	□□□□□ -1.61
TRP1	YDR007W	UBA3	Q99344	299 aa		4.99	□□□□□ -1.61
TRP1	YDR007W	HHF1	P02309	103 aa	Known RBP	4.98	□□□□□ -1.61
TRP1	YDR007W	NHP6B	P11633	99 aa	Known RBP	4.98	□□□□□ -1.61
TRP1	YDR007W	HAP3	P13434	144 aa		4.98	□□□□□ -1.61
TRP1	YDR007W	RPL16A	P26784	199 aa	Known RBP	4.98	□□□□□ -1.61
TRP1	YDR007W	EHD3	P28817	500 aa		4.98	□□□□□ -1.61
TRP1	YDR007W	YUH1	P35127	236 aa		4.98	□□□□□ -1.61
TRP1	YDR007W	CSG2	P35206	410 aa		4.98	□□□□□ -1.61
TRP1	YDR007W	YKL075C	P36083	450 aa		4.98	□□□□□ -1.61
TRP1	YDR007W	FMP46	P36141	133 aa	Known RBP	4.98	□□□□□ -1.61
TRP1	YDR007W	RIB1	P38066	345 aa		4.98	□□□□□ -1.61
TRP1	YDR007W	PAN6	P40459	309 aa		4.98	□□□□□ -1.61
TRP1	YDR007W	BMT5	P40493	336 aa		4.98	□□□□□ -1.61
TRP1	YDR007W	ICE2	P40499	491 aa		4.98	□□□□□ -1.61
TRP1	YDR007W	GDS1	P41913	522 aa		4.98	□□□□□ -1.61
TRP1	YDR007W	YCH1	P42937	148 aa		4.98	□□□□□ -1.61
TRP1	YDR007W	NUP57	P48837	541 aa		4.98	□□□□□ -1.61
TRP1	YDR007W	GIM5	Q04493	163 aa		4.98	□□□□□ -1.61
TRP1	YDR007W	ANT1	Q06497	328 aa		4.98	□□□□□ -1.61
TRP1	YDR007W	MFG1	Q07684	458 aa		4.98	□□□□□ -1.61
TRP1	YDR007W	RRT8	Q08219	342 aa		4.98	□□□□□ -1.61
TRP1	YDR007W	GPM2	Q12008	311 aa		4.98	□□□□□ -1.61
TRP1	YDR007W	TMS1	Q12116	473 aa		4.98	□□□□□ -1.61
TRP1	YDR007W	MOT1	P32333	1867 aa		4.98	□□□□□ -1.61
TRP1	YDR007W	UBR1	P19812	1950 aa		4.98	□□□□□ -1.61
TRP1	YDR007W	HAP2	P06774	265 aa		4.97	□□□□□ -1.61
TRP1	YDR007W	ADH3	P07246	375 aa	Known RBP	4.97	□□□□□ -1.61
TRP1	YDR007W	SGA1	P08019	549 aa		4.97	□□□□□ -1.61
TRP1	YDR007W	RPS8A	P0CX39	200 aa	Known RBP	4.97	□□□□□ -1.61
TRP1	YDR007W	RPS8B	P0CX40	200 aa	Known RBP	4.97	□□□□□ -1.61
TRP1	YDR007W	MSI1	P13712	422 aa		4.97	□□□□□ -1.61
TRP1	YDR007W	YCR102C	P25608	368 aa		4.97	□□□□□ -1.61
TRP1	YDR007W	HOM6	P31116	359 aa	Known RBP	4.97	□□□□□ -1.61
TRP1	YDR007W	CAT2	P32796	670 aa	Known RBP	4.97	□□□□□ -1.61
TRP1	YDR007W	YBL059W	P34224	193 aa		4.97	□□□□□ -1.61
TRP1	YDR007W	YPT31	P38555	223 aa	Known RBP	4.97	□□□□□ -1.61
TRP1	YDR007W	RFC4	P40339	323 aa	Known RBP	4.97	□□□□□ -1.61
TRP1	YDR007W	YJR085C	P47131	105 aa	Known RBP	4.97	□□□□□ -1.61
TRP1	YDR007W	YGL159W	P53110	370 aa		4.97	□□□□□ -1.61
TRP1	YDR007W	COG7	P53195	279 aa		4.97	□□□□□ -1.61
TRP1	YDR007W	SYF2	P53277	215 aa	Predicted RBP	4.97	□□□□□ -1.61
TRP1	YDR007W	YNL260C	P53846	198 aa		4.97	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms