RNA–Protein interactions for RNA: YDL154W

MSH5, Transcript of Protein of the MutS family, yeastyeast

Gene MSH5, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH5YDL154W DPB2P24482 689 aaPredicted RBP1.2□□□□□ -2.22
MSH5YDL154W VMA6P32366 345 aaKnown RBP1.2□□□□□ -2.22
MSH5YDL154W VPS51P36116 164 aa1.2□□□□□ -2.22
MSH5YDL154W MAL32P38158 584 aa1.2□□□□□ -2.22
MSH5YDL154W TRM7P38238 310 aaKnown RBP1.2□□□□□ -2.22
MSH5YDL154W ARN2P38724 620 aa1.2□□□□□ -2.22
MSH5YDL154W YHL044WP38727 235 aa1.2□□□□□ -2.22
MSH5YDL154W SPL2P38839 148 aa1.2□□□□□ -2.22
MSH5YDL154W SER33P40510 469 aa1.2□□□□□ -2.22
MSH5YDL154W AGE2P40529 298 aa1.2□□□□□ -2.22
MSH5YDL154W AGX1P43567 385 aa1.2□□□□□ -2.22
MSH5YDL154W CCC1P47818 322 aa1.2□□□□□ -2.22
MSH5YDL154W HOP2P53187 214 aa1.2□□□□□ -2.22
MSH5YDL154W MAL12P53341 584 aa1.2□□□□□ -2.22
MSH5YDL154W CDC14Q00684 551 aa1.2□□□□□ -2.22
MSH5YDL154W SDO1Q07953 250 aaKnown RBP1.2□□□□□ -2.22
MSH5YDL154W BRX1Q08235 291 aaKnown RBP1.2□□□□□ -2.22
MSH5YDL154W YPR096CO13587 100 aa1.19□□□□□ -2.22
MSH5YDL154W MSF1P08425 469 aa1.19□□□□□ -2.22
MSH5YDL154W NMT1P14743 455 aa1.19□□□□□ -2.22
MSH5YDL154W JEN1P36035 616 aa1.19□□□□□ -2.22
MSH5YDL154W HMT1P38074 348 aa1.19□□□□□ -2.22
MSH5YDL154W YRB2P40517 327 aa1.19□□□□□ -2.22
MSH5YDL154W YAR1P46683 200 aa1.19□□□□□ -2.22
MSH5YDL154W SWS2P53937 143 aa1.19□□□□□ -2.22
MSH5YDL154W YPL039WQ03080 316 aa1.19□□□□□ -2.22
MSH5YDL154W YML108WQ03759 105 aa1.19□□□□□ -2.22
MSH5YDL154W YOL019WQ08157 551 aa1.19□□□□□ -2.22
MSH5YDL154W RRP40Q08285 240 aaKnown RBP1.19□□□□□ -2.22
MSH5YDL154W MSH5Q12175 901 aa1.19□□□□□ -2.22
MSH5YDL154W YPS3Q12303 508 aa1.19□□□□□ -2.22
MSH5YDL154W PRR2Q12310 699 aa1.19□□□□□ -2.22
MSH5YDL154W YBL008W-AQ3E821 79 aa1.19□□□□□ -2.22
MSH5YDL154W SEY1Q99287 776 aa1.19□□□□□ -2.22
MSH5YDL154W RPP0P05317 312 aaKnown RBP1.19□□□□□ -2.22
MSH5YDL154W MET2P08465 486 aa1.19□□□□□ -2.22
MSH5YDL154W MRPL25P23369 157 aa1.19□□□□□ -2.22
MSH5YDL154W RNP1P32385 249 aa1.19□□□□□ -2.22
MSH5YDL154W DOA4P32571 926 aa1.19□□□□□ -2.22
MSH5YDL154W YHL049CP38722 271 aa1.19□□□□□ -2.22
MSH5YDL154W SUR2P38992 349 aa1.19□□□□□ -2.22
MSH5YDL154W YER137CP40083 148 aaKnown RBP1.19□□□□□ -2.22
MSH5YDL154W COS4P43542 379 aa1.19□□□□□ -2.22
MSH5YDL154W SSU72P53538 206 aaPredicted RBP1.19□□□□□ -2.22
MSH5YDL154W SDC1Q03323 175 aa1.19□□□□□ -2.22
MSH5YDL154W YMR166CQ03829 368 aa1.19□□□□□ -2.22
MSH5YDL154W GRX3Q03835 250 aa1.19□□□□□ -2.22
MSH5YDL154W DYN3Q04949 312 aa1.19□□□□□ -2.22
MSH5YDL154W CDC123Q05791 360 aa1.19□□□□□ -2.22
MSH5YDL154W PLB3Q08108 686 aa1.19□□□□□ -2.22
MSH5YDL154W YKR104WP0CE69 306 aa1.18□□□□□ -2.22
MSH5YDL154W STF2P16965 84 aa1.18□□□□□ -2.22
MSH5YDL154W MRPS28P21771 286 aa1.18□□□□□ -2.22
MSH5YDL154W RPT5P33297 434 aaKnown RBP1.18□□□□□ -2.22
MSH5YDL154W PRY2P36110 329 aa1.18□□□□□ -2.22
MSH5YDL154W CAF4P36130 643 aa1.18□□□□□ -2.22
MSH5YDL154W LDB7P38210 180 aa1.18□□□□□ -2.22
MSH5YDL154W SIP3P38717 1229 aa1.18□□□□□ -2.22
MSH5YDL154W YIL001WP40560 513 aa1.18□□□□□ -2.22
MSH5YDL154W HSH155P49955 971 aaKnown RBP1.18□□□□□ -2.22
MSH5YDL154W ORM1P53224 222 aa1.18□□□□□ -2.22
MSH5YDL154W RTC4P53850 401 aa1.18□□□□□ -2.22
MSH5YDL154W BNA7Q04066 261 aa1.18□□□□□ -2.22
MSH5YDL154W YDR222WQ04925 415 aa1.18□□□□□ -2.22
MSH5YDL154W SSQ1Q05931 657 aaPredicted RBP1.18□□□□□ -2.22
MSH5YDL154W YLR031WQ07978 186 aa1.18□□□□□ -2.22
MSH5YDL154W RFM1Q12192 310 aa1.18□□□□□ -2.22
MSH5YDL154W ATG5Q12380 294 aa1.18□□□□□ -2.22
MSH5YDL154W RPL25P04456 142 aaKnown RBP1.18□□□□□ -2.22
MSH5YDL154W SFC1P33303 322 aa1.18□□□□□ -2.22
MSH5YDL154W THO1P40040 218 aaKnown RBP1.18□□□□□ -2.22
MSH5YDL154W COX15P40086 486 aa1.18□□□□□ -2.22
MSH5YDL154W PDS1P40316 373 aaPredicted RBP1.18□□□□□ -2.22
MSH5YDL154W YFR045WP43617 309 aa1.18□□□□□ -2.22
MSH5YDL154W YJL028WP47062 111 aa1.18□□□□□ -2.22
MSH5YDL154W AAH1P53909 347 aa1.18□□□□□ -2.22
MSH5YDL154W FYV6P53913 173 aa1.18□□□□□ -2.22
MSH5YDL154W MYO5Q04439 1219 aaKnown RBP1.18□□□□□ -2.22
MSH5YDL154W YDR124WQ04608 324 aa1.18□□□□□ -2.22
MSH5YDL154W EMP46Q12396 444 aa1.18□□□□□ -2.22
MSH5YDL154W SNF8Q12483 233 aa1.18□□□□□ -2.22
MSH5YDL154W NOT5Q12514 560 aaPredicted RBP1.18□□□□□ -2.22
MSH5YDL154W RPS23AP0CX29 145 aaKnown RBP1.17□□□□□ -2.22
MSH5YDL154W RPS23BP0CX30 145 aa1.17□□□□□ -2.22
MSH5YDL154W MRX3P38172 270 aa1.17□□□□□ -2.22
MSH5YDL154W YBR242WP38331 238 aa1.17□□□□□ -2.22
MSH5YDL154W CUE1P38428 203 aa1.17□□□□□ -2.22
MSH5YDL154W YHR127WP38833 243 aaKnown RBP1.17□□□□□ -2.22
MSH5YDL154W TEM1P38987 245 aa1.17□□□□□ -2.22
MSH5YDL154W YMR144WP40214 342 aaKnown RBP1.17□□□□□ -2.22
MSH5YDL154W YFH7P43591 353 aa1.17□□□□□ -2.22
MSH5YDL154W TMA22P47089 198 aaPredicted RBP1.17□□□□□ -2.22
MSH5YDL154W SPO77Q06134 477 aa1.17□□□□□ -2.22
MSH5YDL154W BOP2Q06150 570 aa1.17□□□□□ -2.22
MSH5YDL154W YLR179CQ06252 201 aaKnown RBP1.17□□□□□ -2.22
MSH5YDL154W YET3Q07451 203 aa1.17□□□□□ -2.22
MSH5YDL154W YCT1Q12235 531 aa1.17□□□□□ -2.22
MSH5YDL154W TCP1P12612 559 aaKnown RBP1.17□□□□□ -2.22
MSH5YDL154W RPL24BP24000 155 aaKnown RBP1.17□□□□□ -2.22
MSH5YDL154W RPS5P26783 225 aaKnown RBP1.17□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms