RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W LSM8P47093 109 aaKnown RBP6.95□□□□□ -1.3
ABP1YCR088W TIM21P53220 239 aa6.95□□□□□ -1.3
ABP1YCR088W HOL1P53389 586 aa6.95□□□□□ -1.3
ABP1YCR088W YIF1P53845 314 aaKnown RBP6.95□□□□□ -1.3
ABP1YCR088W YHR214C-EQ8TGK0 99 aa6.95□□□□□ -1.3
ABP1YCR088W COX5BP00425 151 aa6.94□□□□□ -1.3
ABP1YCR088W SCEIP03882 235 aa6.94□□□□□ -1.3
ABP1YCR088W EHD3P28817 500 aa6.94□□□□□ -1.3
ABP1YCR088W MNS1P32906 549 aa6.94□□□□□ -1.3
ABP1YCR088W YNK1P36010 153 aaKnown RBP6.94□□□□□ -1.3
ABP1YCR088W CDS1P38221 457 aa6.94□□□□□ -1.3
ABP1YCR088W AIM3P38266 947 aaKnown RBP6.94□□□□□ -1.3
ABP1YCR088W YBR197CP38306 217 aa6.94□□□□□ -1.3
ABP1YCR088W YEA4P40004 342 aa6.94□□□□□ -1.3
ABP1YCR088W BLM10P43583 2143 aa6.94□□□□□ -1.3
ABP1YCR088W CTK2P46962 323 aa6.94□□□□□ -1.3
ABP1YCR088W NIT2P47016 307 aa6.94□□□□□ -1.3
ABP1YCR088W MRPS17Q03246 237 aaPredicted RBP6.94□□□□□ -1.3
ABP1YCR088W HAS1Q03532 505 aaKnown RBP6.94□□□□□ -1.3
ABP1YCR088W YDR415CQ04033 374 aaPredicted RBP6.94□□□□□ -1.3
ABP1YCR088W HUT1Q12520 339 aa6.94□□□□□ -1.3
ABP1YCR088W COA2Q3E823 68 aa6.94□□□□□ -1.3
ABP1YCR088W GDH1P07262 454 aaKnown RBP6.93□□□□□ -1.3
ABP1YCR088W GLK1P17709 500 aaKnown RBP6.93□□□□□ -1.3
ABP1YCR088W SWD2P36104 329 aaPredicted RBP6.93□□□□□ -1.3
ABP1YCR088W ERV15P38312 142 aa6.93□□□□□ -1.3
ABP1YCR088W SHG1P38337 142 aa6.93□□□□□ -1.3
ABP1YCR088W YND1P40009 630 aa6.93□□□□□ -1.3
ABP1YCR088W GWT1P47026 490 aa6.93□□□□□ -1.3
ABP1YCR088W HSV2P50079 448 aaPredicted RBP6.93□□□□□ -1.3
ABP1YCR088W YAP1802P53309 568 aa6.93□□□□□ -1.3
ABP1YCR088W BSC5P53755 489 aa6.93□□□□□ -1.3
ABP1YCR088W MAP1Q01662 387 aaKnown RBP RIP-Chip data6.93□□□□□ -1.3not detected
ABP1YCR088W GMC1Q04399 608 aa6.93□□□□□ -1.3
ABP1YCR088W ASM4Q05166 528 aa6.93□□□□□ -1.3
ABP1YCR088W TDA6Q06466 467 aa6.93□□□□□ -1.3
ABP1YCR088W MED4Q12343 284 aa6.93□□□□□ -1.3
ABP1YCR088W YIL046W-AQ3E7Z4 54 aa6.93□□□□□ -1.3
ABP1YCR088W SEC16P48415 2195 aaKnown RBP6.93□□□□□ -1.3
ABP1YCR088W ADH3P07246 375 aaKnown RBP6.92□□□□□ -1.3
ABP1YCR088W REC114P32841 428 aa6.92□□□□□ -1.3
ABP1YCR088W MRPL15P36523 253 aa6.92□□□□□ -1.3
ABP1YCR088W IMD2P38697 523 aaKnown RBP6.92□□□□□ -1.3
ABP1YCR088W YHR210CP38893 341 aa6.92□□□□□ -1.3
ABP1YCR088W GET2P40056 285 aa6.92□□□□□ -1.3
ABP1YCR088W GPP1P41277 250 aaKnown RBP6.92□□□□□ -1.3
ABP1YCR088W BNS1P50084 137 aa6.92□□□□□ -1.3
ABP1YCR088W AVT4P50944 713 aa6.92□□□□□ -1.3
ABP1YCR088W YMR082CQ04276 118 aa6.92□□□□□ -1.3
ABP1YCR088W DAP1Q12091 152 aa6.92□□□□□ -1.3
ABP1YCR088W ELO2P25358 347 aa6.92□□□□□ -1.3
ABP1YCR088W YCR101CP25607 182 aa6.92□□□□□ -1.3
ABP1YCR088W CDC39P25655 2108 aaKnown RBP6.92□□□□□ -1.3
ABP1YCR088W ERG2P32352 222 aa6.92□□□□□ -1.3
ABP1YCR088W GLC7P32598 312 aaKnown RBP6.92□□□□□ -1.3
ABP1YCR088W PHB1P40961 287 aa6.92□□□□□ -1.3
ABP1YCR088W MOB2P43563 287 aa6.92□□□□□ -1.3
ABP1YCR088W YJL016WP47072 561 aa6.92□□□□□ -1.3
ABP1YCR088W YJR012CP47087 207 aa6.92□□□□□ -1.3
ABP1YCR088W OCA1P50946 238 aaPredicted RBP6.92□□□□□ -1.3
ABP1YCR088W SKP1P52286 194 aa6.92□□□□□ -1.3
ABP1YCR088W NSA1P53136 463 aaPredicted RBP6.92□□□□□ -1.3
ABP1YCR088W ARL3Q02804 198 aa6.92□□□□□ -1.3
ABP1YCR088W CDC36P06100 191 aaPredicted RBP6.91□□□□□ -1.3
ABP1YCR088W PET494P07390 489 aaPredicted RBP6.91□□□□□ -1.3
ABP1YCR088W TY1A-HP0C2I4 478 aaKnown RBP6.91□□□□□ -1.3
ABP1YCR088W SNF5P18480 905 aa6.91□□□□□ -1.3
ABP1YCR088W YCR025CP25352 136 aa6.91□□□□□ -1.3
ABP1YCR088W YER010CP40011 234 aa6.91□□□□□ -1.3
ABP1YCR088W IRC24P40580 263 aa6.91□□□□□ -1.3
ABP1YCR088W GIS1Q03833 894 aa6.91□□□□□ -1.3
ABP1YCR088W GLT1Q12680 2145 aaKnown RBP6.91□□□□□ -1.3
ABP1YCR088W CSF1Q12150 2958 aa6.91□□□□□ -1.3
ABP1YCR088W VMA3P25515 160 aa6.9□□□□□ -1.3
ABP1YCR088W OCH1P31755 480 aa6.9□□□□□ -1.3
ABP1YCR088W SEN34P39707 275 aa6.9□□□□□ -1.3
ABP1YCR088W RMD6P39975 231 aa6.9□□□□□ -1.3
ABP1YCR088W RPL13BP40212 199 aaKnown RBP6.9□□□□□ -1.3
ABP1YCR088W XBP1P40489 647 aa6.9□□□□□ -1.3
ABP1YCR088W CUP9P41817 306 aa6.9□□□□□ -1.3
ABP1YCR088W GNA1P43577 159 aaPredicted RBP6.9□□□□□ -1.3
ABP1YCR088W SMM1P53720 384 aaKnown RBP6.9□□□□□ -1.3
ABP1YCR088W FYV6P53913 173 aa6.9□□□□□ -1.3
ABP1YCR088W RPL13AQ12690 199 aaPredicted RBP6.9□□□□□ -1.3
ABP1YCR088W ACC1Q00955 2233 aaKnown RBP6.9□□□□□ -1.3
ABP1YCR088W CDC28P00546 298 aaKnown RBP6.9□□□□□ -1.31
ABP1YCR088W LAC1P28496 418 aa6.9□□□□□ -1.31
ABP1YCR088W RPL14AP36105 138 aaKnown RBP6.9□□□□□ -1.31
ABP1YCR088W MRPL4P36517 319 aa6.9□□□□□ -1.31
ABP1YCR088W RPL14BP38754 138 aaKnown RBP6.9□□□□□ -1.31
ABP1YCR088W FMO1P38866 432 aa6.9□□□□□ -1.31
ABP1YCR088W SHO1P40073 367 aa6.9□□□□□ -1.31
ABP1YCR088W TPP1Q03796 238 aa6.9□□□□□ -1.31
ABP1YCR088W TSA2Q04120 196 aa6.9□□□□□ -1.31
ABP1YCR088W SEN15Q04675 128 aa6.9□□□□□ -1.31
ABP1YCR088W YPR063CQ12160 140 aa6.9□□□□□ -1.31
ABP1YCR088W AIM45Q12480 344 aaKnown RBP6.9□□□□□ -1.31
ABP1YCR088W TDH3P00359 332 aaKnown RBP RIP-Chip data6.89□□□□□ -1.31not detected
ABP1YCR088W CKA1P15790 372 aa6.89□□□□□ -1.31
ABP1YCR088W TOK1P40310 691 aa6.89□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 85.3 ms