RNA–Protein interactions for RNA: snR87

snR87, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR87, Length 109 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR87snR87 PRE1P22141 198 aaKnown RBP-2.98□□□□□ -2.89
snR87snR87 CIN8P27895 1000 aa-2.98□□□□□ -2.89
snR87snR87 URA7P28274 579 aaKnown RBP-2.98□□□□□ -2.89
snR87snR87 PRS4P38063 326 aaPredicted RBP-2.98□□□□□ -2.89
snR87snR87 VAB2P40003 282 aa-2.98□□□□□ -2.89
snR87snR87 YPL073CP40323 161 aa-2.98□□□□□ -2.89
snR87snR87 PHM6Q05637 104 aa-2.98□□□□□ -2.89
snR87snR87 KTI11Q3E840 82 aa-2.98□□□□□ -2.89
snR87snR87 YPT6Q99260 215 aa-2.98□□□□□ -2.89
snR87snR87 ERV1P27882 189 aa-2.99□□□□□ -2.89
snR87snR87 COT1P32798 439 aa-2.99□□□□□ -2.89
snR87snR87 YRA2P36036 203 aaKnown RBP RIP-Chip data-2.99□□□□□ -2.89not detected
snR87snR87 ECM13P38195 257 aa-2.99□□□□□ -2.89
snR87snR87 POP8P38208 133 aa-2.99□□□□□ -2.89
snR87snR87 YNL194CP40169 301 aa-2.99□□□□□ -2.89
snR87snR87 GPG1P53130 126 aa-2.99□□□□□ -2.89
snR87snR87 RVB1Q03940 463 aaKnown RBP-2.99□□□□□ -2.89
snR87snR87 YEH1Q07804 573 aa-2.99□□□□□ -2.89
snR87snR87 APC9Q12107 265 aa-2.99□□□□□ -2.89
snR87snR87 RIB3Q99258 208 aa-2.99□□□□□ -2.89
snR87snR87 VPS21P36017 210 aaKnown RBP-3□□□□□ -2.89
snR87snR87 IPT1P38954 527 aa-3□□□□□ -2.89
snR87snR87 YER034WP40022 185 aaKnown RBP-3□□□□□ -2.89
snR87snR87 LCP5P40079 357 aaPredicted RBP-3□□□□□ -2.89
snR87snR87 NUP82P40368 713 aa-3□□□□□ -2.89
snR87snR87 TCB2P48231 1178 aa-3□□□□□ -2.89
snR87snR87 SBH2P52871 88 aa-3□□□□□ -2.89
snR87snR87 SEI1Q06058 285 aa-3□□□□□ -2.89
snR87snR87 ATG40Q99325 256 aa-3□□□□□ -2.89
snR87snR87 IPP1P00817 287 aaKnown RBP-3.01□□□□□ -2.89
snR87snR87 ATP6P00854 259 aa-3.01□□□□□ -2.89
snR87snR87 KAR3P17119 729 aa-3.01□□□□□ -2.89
snR87snR87 GPI12P23797 304 aa-3.01□□□□□ -2.89
snR87snR87 RIB1P38066 345 aa-3.01□□□□□ -2.89
snR87snR87 URA8P38627 578 aaPredicted RBP-3.01□□□□□ -2.89
snR87snR87 YHR173CP38864 112 aa-3.01□□□□□ -2.89
snR87snR87 CYC2P38909 366 aa-3.01□□□□□ -2.89
snR87snR87 YGL230CP53074 147 aa-3.01□□□□□ -2.89
snR87snR87 YNR068CP53754 272 aa-3.01□□□□□ -2.89
snR87snR87 YNL134CP53912 376 aaKnown RBP-3.01□□□□□ -2.89
snR87snR87 ALG11P53954 548 aaKnown RBP-3.01□□□□□ -2.89
snR87snR87 RAD30Q04049 632 aa-3.01□□□□□ -2.89
snR87snR87 ARV1Q06541 321 aa-3.01□□□□□ -2.89
snR87snR87 RPN5Q12250 445 aaKnown RBP-3.01□□□□□ -2.89
snR87snR87 IRA1P18963 3092 aa-3.01□□□□□ -2.89
snR87snR87 RPL12AP0CX53 165 aaKnown RBP-3.02□□□□□ -2.89
snR87snR87 RPL12BP0CX54 165 aa-3.02□□□□□ -2.89
snR87snR87 APA2P22108 325 aa-3.02□□□□□ -2.89
snR87snR87 IFM1P25038 676 aa-3.02□□□□□ -2.89
snR87snR87 CWP1P28319 239 aa-3.02□□□□□ -2.89
snR87snR87 YJR128WP47162 119 aa-3.02□□□□□ -2.89
snR87snR87 DAD4P69851 72 aa-3.02□□□□□ -2.89
snR87snR87 RPN9Q04062 393 aaKnown RBP-3.02□□□□□ -2.89
snR87snR87 YDR341CQ05506 607 aaKnown RBP-3.02□□□□□ -2.89
snR87snR87 FIT3Q08907 204 aa-3.02□□□□□ -2.89
snR87snR87 YCT1Q12235 531 aa-3.02□□□□□ -2.89
snR87snR87 YPR1Q12458 312 aa-3.02□□□□□ -2.89
snR87snR87 ERD1P16151 362 aa-3.03□□□□□ -2.89
snR87snR87 RME1P32338 300 aaKnown RBP-3.03□□□□□ -2.89
snR87snR87 SEC66P33754 206 aa-3.03□□□□□ -2.89
snR87snR87 SHE2P36068 246 aaKnown RBP RIP-Chip data-3.03□□□□□ -2.89not detected
snR87snR87 KAP104P38217 918 aaKnown RBP-3.03□□□□□ -2.89
snR87snR87 SHQ1P40486 507 aaPredicted RBP-3.03□□□□□ -2.89
snR87snR87 ALB1P47019 175 aaPredicted RBP-3.03□□□□□ -2.89
snR87snR87 UBC12P52491 188 aa-3.03□□□□□ -2.89
snR87snR87 RMT2Q03305 412 aa-3.03□□□□□ -2.89
snR87snR87 NSE3Q05541 303 aa-3.03□□□□□ -2.89
snR87snR87 YOR385WQ08909 290 aa-3.03□□□□□ -2.89
snR87snR87 VAM3Q12241 283 aa-3.03□□□□□ -2.89
snR87snR87 RDI1Q12434 202 aa-3.03□□□□□ -2.89
snR87snR87 YBR072C-AQ3E794 53 aa-3.03□□□□□ -2.89
snR87snR87 YOS9Q99220 542 aa-3.03□□□□□ -2.89
snR87snR87 CDC39P25655 2108 aaKnown RBP-3.04□□□□□ -2.9
snR87snR87 CCW14O13547 238 aa-3.04□□□□□ -2.9
snR87snR87 YLR255CO13574 117 aa-3.04□□□□□ -2.9
snR87snR87 ARG3P05150 338 aa-3.04□□□□□ -2.9
snR87snR87 VPS3P23643 1011 aa-3.04□□□□□ -2.9
snR87snR87 ETR1P38071 380 aa-3.04□□□□□ -2.9
snR87snR87 SEN34P39707 275 aa-3.04□□□□□ -2.9
snR87snR87 SGN1P40561 250 aaKnown RBP RIP-Chip data-3.04□□□□□ -2.9not detected
snR87snR87 CUP9P41817 306 aa-3.04□□□□□ -2.9
snR87snR87 HCH1P53834 153 aa-3.04□□□□□ -2.9
snR87snR87 PRO2P54885 456 aaKnown RBP-3.04□□□□□ -2.9
snR87snR87 MRPL13Q02204 264 aa-3.04□□□□□ -2.9
snR87snR87 EMI1Q04406 187 aa-3.04□□□□□ -2.9
snR87snR87 YLR446WQ06204 433 aa-3.04□□□□□ -2.9
snR87snR87 FSF1Q12029 327 aaKnown RBP-3.04□□□□□ -2.9
snR87snR87 RNH203Q12338 110 aa-3.04□□□□□ -2.9
snR87snR87 EMP46Q12396 444 aa-3.04□□□□□ -2.9
snR87snR87 ERP4Q12450 207 aa-3.04□□□□□ -2.9
snR87snR87 COS2P0CX12 379 aa-3.05□□□□□ -2.9
snR87snR87 COS3P0CX13 379 aa-3.05□□□□□ -2.9
snR87snR87 SPS100P13130 326 aa-3.05□□□□□ -2.9
snR87snR87 MRPS28P21771 286 aa-3.05□□□□□ -2.9
snR87snR87 HMT1P38074 348 aa-3.05□□□□□ -2.9
snR87snR87 UMP1P38293 148 aa-3.05□□□□□ -2.9
snR87snR87 NTC20P38302 140 aaPredicted RBP-3.05□□□□□ -2.9
snR87snR87 COX23P38824 151 aa-3.05□□□□□ -2.9
snR87snR87 TDA11P38854 504 aa-3.05□□□□□ -2.9
snR87snR87 XPT1P47165 209 aa-3.05□□□□□ -2.9
Retrieved 100 of 5,963 RNA–protein pairs in 69.6 ms