RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C PET494P07390 489 aaPredicted RBP4.71□□□□□ -1.66
RAT1YOR048C MET3P08536 511 aa4.71□□□□□ -1.66
RAT1YOR048C TY1A-HP0C2I4 478 aaKnown RBP4.71□□□□□ -1.66
RAT1YOR048C SDH4P37298 181 aa4.71□□□□□ -1.66
RAT1YOR048C SEN34P39707 275 aa4.71□□□□□ -1.66
RAT1YOR048C SLM1P40485 686 aa4.71□□□□□ -1.66
RAT1YOR048C GTT1P40582 234 aa4.71□□□□□ -1.66
RAT1YOR048C YJR011CP47086 261 aaPredicted RBP4.71□□□□□ -1.66
RAT1YOR048C SEC13Q04491 297 aaKnown RBP4.71□□□□□ -1.66
RAT1YOR048C GLK1P17709 500 aaKnown RBP4.7□□□□□ -1.66
RAT1YOR048C YOR062CP36025 268 aa4.7□□□□□ -1.66
RAT1YOR048C PFS1P38872 237 aa4.7□□□□□ -1.66
RAT1YOR048C SWM2P40342 146 aa4.7□□□□□ -1.66
RAT1YOR048C LTP1P40347 161 aa4.7□□□□□ -1.66
RAT1YOR048C NIF3P53081 288 aa4.7□□□□□ -1.66
RAT1YOR048C ALG12P53730 551 aa4.7□□□□□ -1.66
RAT1YOR048C YIF1P53845 314 aaKnown RBP4.7□□□□□ -1.66
RAT1YOR048C GPI15P53961 229 aa4.7□□□□□ -1.66
RAT1YOR048C YLR152CP54072 576 aa4.7□□□□□ -1.66
RAT1YOR048C YOL118CQ08259 102 aa4.7□□□□□ -1.66
RAT1YOR048C COX5BP00425 151 aa4.7□□□□□ -1.66
RAT1YOR048C SNF5P18480 905 aa4.7□□□□□ -1.66
RAT1YOR048C BET2P20133 325 aa4.7□□□□□ -1.66
RAT1YOR048C PRS2P38620 318 aaKnown RBP4.7□□□□□ -1.66
RAT1YOR048C ERJ5P43613 295 aaPredicted RBP4.7□□□□□ -1.66
RAT1YOR048C SMM1P53720 384 aaKnown RBP4.7□□□□□ -1.66
RAT1YOR048C MRP51Q02950 344 aa4.7□□□□□ -1.66
RAT1YOR048C GIS1Q03833 894 aa4.7□□□□□ -1.66
RAT1YOR048C HNT1Q04344 158 aaKnown RBP4.7□□□□□ -1.66
RAT1YOR048C ERP1Q05359 219 aaKnown RBP4.7□□□□□ -1.66
RAT1YOR048C GRE1Q08969 168 aa4.7□□□□□ -1.66
RAT1YOR048C YDR262WQ12331 272 aa4.7□□□□□ -1.66
RAT1YOR048C EMP70P32802 667 aa4.7□□□□□ -1.66
RAT1YOR048C UPS2P35200 230 aa4.7□□□□□ -1.66
RAT1YOR048C IKS1P47042 667 aa4.7□□□□□ -1.66
RAT1YOR048C BNS1P50084 137 aa4.7□□□□□ -1.66
RAT1YOR048C OCA1P50946 238 aaPredicted RBP4.7□□□□□ -1.66
RAT1YOR048C MIM1Q08176 113 aa4.7□□□□□ -1.66
RAT1YOR048C ENB1Q08299 606 aa4.7□□□□□ -1.66
RAT1YOR048C LEU9Q12166 604 aaKnown RBP4.7□□□□□ -1.66
RAT1YOR048C MCT1Q12283 360 aa4.7□□□□□ -1.66
RAT1YOR048C COA2Q3E823 68 aa4.7□□□□□ -1.66
RAT1YOR048C QCR7P00128 127 aa4.69□□□□□ -1.66
RAT1YOR048C TDH3P00359 332 aaKnown RBP RIP-Chip data4.69□□□□□ -1.66not detected
RAT1YOR048C TDH1P00360 332 aaKnown RBP4.69□□□□□ -1.66
RAT1YOR048C SRP102P36057 244 aaPredicted RBP4.69□□□□□ -1.66
RAT1YOR048C NEM1P38757 446 aa4.69□□□□□ -1.66
RAT1YOR048C YEA6P39953 335 aa4.69□□□□□ -1.66
RAT1YOR048C YCK3P39962 524 aa4.69□□□□□ -1.66
RAT1YOR048C LSM8P47093 109 aaKnown RBP4.69□□□□□ -1.66
RAT1YOR048C CCC1P47818 322 aa4.69□□□□□ -1.66
RAT1YOR048C MPP6P53725 186 aaPredicted RBP4.69□□□□□ -1.66
RAT1YOR048C SMA2Q04658 369 aa4.69□□□□□ -1.66
RAT1YOR048C NNT1Q05874 261 aa4.69□□□□□ -1.66
RAT1YOR048C STP3Q05937 343 aa4.69□□□□□ -1.66
RAT1YOR048C BSC6Q08280 497 aa4.69□□□□□ -1.66
RAT1YOR048C RLM1Q12224 676 aa4.69□□□□□ -1.66
RAT1YOR048C HFA1P32874 2273 aa4.69□□□□□ -1.66
RAT1YOR048C NUP1P20676 1076 aa4.69□□□□□ -1.66
RAT1YOR048C REC114P32841 428 aa4.69□□□□□ -1.66
RAT1YOR048C IMD2P38697 523 aaKnown RBP4.69□□□□□ -1.66
RAT1YOR048C PHB1P40961 287 aa4.69□□□□□ -1.66
RAT1YOR048C CUP9P41817 306 aa4.69□□□□□ -1.66
RAT1YOR048C ERG13P54839 491 aaKnown RBP4.69□□□□□ -1.66
RAT1YOR048C USV1Q12132 391 aa4.69□□□□□ -1.66
RAT1YOR048C HUT1Q12520 339 aa4.69□□□□□ -1.66
RAT1YOR048C SET6Q12529 373 aa4.69□□□□□ -1.66
RAT1YOR048C YOR192C-CQ3E736 78 aa4.69□□□□□ -1.66
RAT1YOR048C MATALPHA1P0CY06 175 aa4.68□□□□□ -1.66
RAT1YOR048C HMLALPHA1P0CY07 175 aa4.68□□□□□ -1.66
RAT1YOR048C SPO13P23624 291 aa4.68□□□□□ -1.66
RAT1YOR048C TRR1P29509 319 aaKnown RBP4.68□□□□□ -1.66
RAT1YOR048C FAA1P30624 700 aaKnown RBP4.68□□□□□ -1.66
RAT1YOR048C SEF1P34228 1148 aa4.68□□□□□ -1.66
RAT1YOR048C MRPL28P36527 147 aa4.68□□□□□ -1.66
RAT1YOR048C GPI16P38875 610 aa4.68□□□□□ -1.66
RAT1YOR048C SMB1P40018 196 aaKnown RBP4.68□□□□□ -1.66
RAT1YOR048C SCW4P53334 386 aaKnown RBP4.68□□□□□ -1.66
RAT1YOR048C ACS1Q01574 713 aa4.68□□□□□ -1.66
RAT1YOR048C CET1O13297 549 aaPredicted RBP4.68□□□□□ -1.66
RAT1YOR048C CHO1P08456 276 aa4.68□□□□□ -1.66
RAT1YOR048C MGE1P38523 228 aa4.68□□□□□ -1.66
RAT1YOR048C YAL037WP39728 267 aa4.68□□□□□ -1.66
RAT1YOR048C YND1P40009 630 aa4.68□□□□□ -1.66
RAT1YOR048C HXT14P42833 540 aa4.68□□□□□ -1.66
RAT1YOR048C UFD1P53044 361 aa4.68□□□□□ -1.66
RAT1YOR048C YGR126WP53274 230 aa4.68□□□□□ -1.66
RAT1YOR048C CUZ1P53899 274 aa4.68□□□□□ -1.66
RAT1YOR048C YCL001W-AP87012 153 aa4.68□□□□□ -1.66
RAT1YOR048C NCE102Q12207 173 aaRIP-Chip data4.68□□□□□ -1.66not detected
RAT1YOR048C ERG27Q12452 347 aaKnown RBP4.68□□□□□ -1.66
RAT1YOR048C STP22P25604 385 aa4.67□□□□□ -1.66
RAT1YOR048C CDC50P25656 391 aa4.67□□□□□ -1.66
RAT1YOR048C ACP1P32463 125 aa4.67□□□□□ -1.66
RAT1YOR048C GPX1P36014 167 aa4.67□□□□□ -1.66
RAT1YOR048C YHR210CP38893 341 aa4.67□□□□□ -1.66
RAT1YOR048C YGL185CP53100 379 aa4.67□□□□□ -1.66
RAT1YOR048C GIM3P53900 129 aa4.67□□□□□ -1.66
RAT1YOR048C THI74Q04083 370 aa4.67□□□□□ -1.66
RAT1YOR048C YPR172WQ06608 200 aa4.67□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms