RNA–Protein interactions for RNA: YKL057C

NUP120, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP120, Length 3,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP120YKL057C DOA4P32571 926 aa1.25□□□□□ -2.21
NUP120YKL057C EAF6P47128 113 aa1.25□□□□□ -2.21
NUP120YKL057C RPN14P53196 417 aa1.25□□□□□ -2.21
NUP120YKL057C GIM3P53900 129 aa1.25□□□□□ -2.21
NUP120YKL057C CDC123Q05791 360 aa1.25□□□□□ -2.21
NUP120YKL057C SYC1Q08553 188 aaPredicted RBP1.25□□□□□ -2.21
NUP120YKL057C HAM1P47119 197 aaKnown RBP1.24□□□□□ -2.21
NUP120YKL057C TRM9P49957 279 aa1.24□□□□□ -2.21
NUP120YKL057C UFD1P53044 361 aa1.24□□□□□ -2.21
NUP120YKL057C YHR086W-AQ3E746 53 aa1.24□□□□□ -2.21
NUP120YKL057C DBP3P20447 523 aaKnown RBP1.24□□□□□ -2.21
NUP120YKL057C AVT2P39981 480 aa1.24□□□□□ -2.21
NUP120YKL057C SCC4P40090 624 aa1.24□□□□□ -2.21
NUP120YKL057C PIR5P46999 287 aa1.24□□□□□ -2.21
NUP120YKL057C YMR114CQ04471 368 aaKnown RBP1.24□□□□□ -2.21
NUP120YKL057C FUS2Q05670 677 aa1.24□□□□□ -2.21
NUP120YKL057C RPL27AP0C2H6 136 aaKnown RBP1.24□□□□□ -2.21
NUP120YKL057C RPL27BP0C2H7 136 aaKnown RBP1.24□□□□□ -2.21
NUP120YKL057C MATALPHA2P0CY08 210 aa1.24□□□□□ -2.21
NUP120YKL057C HMLALPHA2P0CY09 210 aa1.24□□□□□ -2.21
NUP120YKL057C YER189WP40104 122 aa1.24□□□□□ -2.21
NUP120YKL057C YNL194CP40169 301 aa1.24□□□□□ -2.21
NUP120YKL057C BXI1P48558 297 aa1.24□□□□□ -2.21
NUP120YKL057C DIB1Q06819 143 aaPredicted RBP1.24□□□□□ -2.21
NUP120YKL057C LSO2Q3E772 92 aaKnown RBP1.24□□□□□ -2.21
NUP120YKL057C YMR31P19955 123 aa1.23□□□□□ -2.21
NUP120YKL057C CSG2P35206 410 aa1.23□□□□□ -2.21
NUP120YKL057C LSM4P40070 187 aaKnown RBP1.23□□□□□ -2.21
NUP120YKL057C YFR045WP43617 309 aa1.23□□□□□ -2.21
NUP120YKL057C ADO1P47143 340 aaKnown RBP1.23□□□□□ -2.21
NUP120YKL057C LSB1P53281 241 aa1.23□□□□□ -2.21
NUP120YKL057C GAS3Q03655 524 aa1.23□□□□□ -2.21
NUP120YKL057C YMR226CQ05016 267 aaKnown RBP1.23□□□□□ -2.21
NUP120YKL057C SDO1Q07953 250 aaKnown RBP1.23□□□□□ -2.21
NUP120YKL057C CCH1P50077 2039 aa1.23□□□□□ -2.21
NUP120YKL057C CKS1P20486 150 aaKnown RBP1.23□□□□□ -2.21
NUP120YKL057C HOP2P53187 214 aa1.23□□□□□ -2.21
NUP120YKL057C TDH2P00358 332 aaKnown RBP1.22□□□□□ -2.21
NUP120YKL057C CDC8P00572 216 aa1.22□□□□□ -2.21
NUP120YKL057C RPL25P04456 142 aaKnown RBP1.22□□□□□ -2.21
NUP120YKL057C AGA2P32781 87 aa1.22□□□□□ -2.21
NUP120YKL057C KRE28Q04431 385 aa1.22□□□□□ -2.21
NUP120YKL057C YPL247CQ12523 523 aa1.22□□□□□ -2.21
NUP120YKL057C URA6P15700 204 aa1.22□□□□□ -2.21
NUP120YKL057C YBR063CP38083 404 aa1.22□□□□□ -2.21
NUP120YKL057C SER33P40510 469 aa1.22□□□□□ -2.21
NUP120YKL057C CDC40P40968 455 aaPredicted RBP1.22□□□□□ -2.21
NUP120YKL057C MNN5P46982 586 aa1.22□□□□□ -2.21
NUP120YKL057C YDR248CQ03786 193 aa1.22□□□□□ -2.21
NUP120YKL057C ATG5Q12380 294 aa1.22□□□□□ -2.21
NUP120YKL057C FLO9P39712 1322 aa1.22□□□□□ -2.21
NUP120YKL057C FBA1P14540 359 aaKnown RBP1.22□□□□□ -2.21
NUP120YKL057C POL30P15873 258 aaKnown RBP1.22□□□□□ -2.21
NUP120YKL057C VPH2P32341 215 aa1.22□□□□□ -2.21
NUP120YKL057C MRPL28P36527 147 aa1.22□□□□□ -2.21
NUP120YKL057C SAY1P53324 424 aa1.22□□□□□ -2.21
NUP120YKL057C GGA1Q06336 557 aa1.22□□□□□ -2.21
NUP120YKL057C THP2O13539 261 aaKnown RBP1.21□□□□□ -2.22
NUP120YKL057C DBF2P22204 572 aa1.21□□□□□ -2.22
NUP120YKL057C TDA8Q6B2U8 126 aa1.21□□□□□ -2.22
NUP120YKL057C CDC28P00546 298 aaKnown RBP1.21□□□□□ -2.22
NUP120YKL057C RHO1P06780 209 aaKnown RBP1.21□□□□□ -2.22
NUP120YKL057C TRX3P25372 127 aa1.21□□□□□ -2.22
NUP120YKL057C HOM6P31116 359 aaKnown RBP1.21□□□□□ -2.22
NUP120YKL057C VMA6P32366 345 aaKnown RBP1.21□□□□□ -2.22
NUP120YKL057C SPS18P32572 300 aa1.21□□□□□ -2.22
NUP120YKL057C NUP57P48837 541 aa1.21□□□□□ -2.22
NUP120YKL057C MDM34P53083 459 aa1.21□□□□□ -2.22
NUP120YKL057C NOP13P53883 403 aaKnown RBP RIP-Chip data1.21□□□□□ -2.22not detected
NUP120YKL057C UBR2Q07963 1872 aa1.2□□□□□ -2.22
NUP120YKL057C MSF1P08425 469 aa1.2□□□□□ -2.22
NUP120YKL057C DOG2P38773 246 aa1.2□□□□□ -2.22
NUP120YKL057C DOG1P38774 246 aa1.2□□□□□ -2.22
NUP120YKL057C RTR1P40084 226 aaPredicted RBP1.2□□□□□ -2.22
NUP120YKL057C HTB1P02293 131 aaKnown RBP1.2□□□□□ -2.22
NUP120YKL057C HTB2P02294 131 aa1.2□□□□□ -2.22
NUP120YKL057C GCN20P43535 752 aaKnown RBP1.2□□□□□ -2.22
NUP120YKL057C CYT2Q00873 224 aa1.2□□□□□ -2.22
NUP120YKL057C PEX12Q04370 399 aa1.2□□□□□ -2.22
NUP120YKL057C SAC3P46674 1301 aa1.2□□□□□ -2.22
NUP120YKL057C HIS3P06633 220 aa1.2□□□□□ -2.22
NUP120YKL057C SWS2P53937 143 aa1.2□□□□□ -2.22
NUP120YKL057C MRPS17Q03246 237 aaPredicted RBP1.2□□□□□ -2.22
NUP120YKL057C CDC36P06100 191 aaPredicted RBP1.19□□□□□ -2.22
NUP120YKL057C SIR2P06700 562 aa1.19□□□□□ -2.22
NUP120YKL057C PIN3Q06449 215 aa1.19□□□□□ -2.22
NUP120YKL057C YHR214C-EQ8TGK0 99 aa1.19□□□□□ -2.22
NUP120YKL057C YLR462WO13556 202 aa1.19□□□□□ -2.22
NUP120YKL057C SCO1P23833 295 aa1.19□□□□□ -2.22
NUP120YKL057C YEL075CP39972 122 aa1.19□□□□□ -2.22
NUP120YKL057C YGL159WP53110 370 aa1.19□□□□□ -2.22
NUP120YKL057C ALG13P53178 202 aa1.19□□□□□ -2.22
NUP120YKL057C HRT1Q08273 121 aa1.19□□□□□ -2.22
NUP120YKL057C EMP46Q12396 444 aa1.19□□□□□ -2.22
NUP120YKL057C NSP1P14907 823 aaKnown RBP1.18□□□□□ -2.22
NUP120YKL057C PRP18P33411 251 aaPredicted RBP1.18□□□□□ -2.22
NUP120YKL057C SIP3P38717 1229 aa1.18□□□□□ -2.22
NUP120YKL057C SMB1P40018 196 aaKnown RBP1.18□□□□□ -2.22
NUP120YKL057C YER085CP40058 173 aa1.18□□□□□ -2.22
NUP120YKL057C RPL33BP41056 107 aaKnown RBP1.18□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 86.1 ms