RNA–Protein interactions for RNA: YKL057C

NUP120, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP120, Length 3,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP120YKL057C DRS1P32892 752 aaKnown RBP7.47□□□□□ -1.21
NUP120YKL057C MTC1P47018 478 aaKnown RBP7.01□□□□□ -1.29
NUP120YKL057C BFR2Q06631 534 aaKnown RBP6.61□□□□□ -1.35
NUP120YKL057C FAP1P53971 965 aa6.24□□□□□ -1.41
NUP120YKL057C DIP2Q12220 943 aaPredicted RBP6.17□□□□□ -1.42
NUP120YKL057C ISW2Q08773 1120 aa5.94□□□□□ -1.46
NUP120YKL057C RSE1Q04693 1361 aaKnown RBP5.91□□□□□ -1.46
NUP120YKL057C REB1P21538 810 aa5.83□□□□□ -1.48
NUP120YKL057C TFA1P36100 482 aa5.82□□□□□ -1.48
NUP120YKL057C RPG1P38249 964 aaKnown RBP5.78□□□□□ -1.48
NUP120YKL057C RPL17AP05740 184 aaKnown RBP5.76□□□□□ -1.49
NUP120YKL057C RPL17BP46990 184 aaKnown RBP5.76□□□□□ -1.49
NUP120YKL057C RQC2Q12532 1038 aaKnown RBP5.75□□□□□ -1.49
NUP120YKL057C AVT3P36062 692 aa5.73□□□□□ -1.49
NUP120YKL057C PRY3P47033 881 aa5.71□□□□□ -1.5
NUP120YKL057C AAD16Q02895 342 aa5.63□□□□□ -1.51
NUP120YKL057C PTP3P40048 928 aa5.52□□□□□ -1.53
NUP120YKL057C TSR3Q12094 313 aaKnown RBP5.51□□□□□ -1.53
NUP120YKL057C PRI1P10363 409 aa5.44□□□□□ -1.54
NUP120YKL057C MRPL32P25348 183 aa5.44□□□□□ -1.54
NUP120YKL057C YAH1Q12184 172 aaKnown RBP5.43□□□□□ -1.54
NUP120YKL057C YIL055CP40523 627 aaKnown RBP5.42□□□□□ -1.54
NUP120YKL057C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.3□□□□□ -1.56not detected
NUP120YKL057C HAA1Q12753 694 aaKnown RBP5.18□□□□□ -1.58
NUP120YKL057C SSP1P38871 571 aa5.14□□□□□ -1.59
NUP120YKL057C HOP09932 586 aa5.13□□□□□ -1.59
NUP120YKL057C DMA1P38823 416 aa5.11□□□□□ -1.59
NUP120YKL057C BBC1P47068 1157 aa5.08□□□□□ -1.6
NUP120YKL057C DCD1P06773 312 aa5.03□□□□□ -1.6
NUP120YKL057C RSM7P47150 247 aa5.01□□□□□ -1.61
NUP120YKL057C RIM101P33400 625 aa5□□□□□ -1.61
NUP120YKL057C SPT21P35209 758 aa4.97□□□□□ -1.61
NUP120YKL057C SCY1P53009 804 aa4.94□□□□□ -1.62
NUP120YKL057C OXP1P28273 1286 aa4.88□□□□□ -1.63
NUP120YKL057C AI2P03876 854 aa4.88□□□□□ -1.63
NUP120YKL057C TFC8Q12308 588 aa4.88□□□□□ -1.63
NUP120YKL057C MGA2P40578 1113 aa4.87□□□□□ -1.63
NUP120YKL057C YKR023WP36119 530 aaKnown RBP4.86□□□□□ -1.63
NUP120YKL057C YGL015CP33199 130 aa4.86□□□□□ -1.63
NUP120YKL057C CDC27P38042 758 aa4.86□□□□□ -1.63
NUP120YKL057C SLX5P32828 619 aaKnown RBP4.85□□□□□ -1.63
NUP120YKL057C MRM1P25270 412 aa4.84□□□□□ -1.63
NUP120YKL057C GTT3P39996 337 aa4.84□□□□□ -1.63
NUP120YKL057C YLR271WQ06152 274 aa4.83□□□□□ -1.64
NUP120YKL057C SPB4P25808 606 aaPredicted RBP4.83□□□□□ -1.64
NUP120YKL057C TIF4632P39936 914 aaKnown RBP4.8□□□□□ -1.64
NUP120YKL057C MIF2P35201 549 aa4.78□□□□□ -1.64
NUP120YKL057C EPS1P40557 701 aa4.78□□□□□ -1.64
NUP120YKL057C MAP2P38174 421 aaKnown RBP4.77□□□□□ -1.65
NUP120YKL057C BCH2P36122 765 aa4.77□□□□□ -1.65
NUP120YKL057C PIB1Q06651 286 aa4.76□□□□□ -1.65
NUP120YKL057C CST9Q06032 482 aa4.74□□□□□ -1.65
NUP120YKL057C VPS70P47161 811 aa4.71□□□□□ -1.66
NUP120YKL057C RTG3P38165 486 aa4.69□□□□□ -1.66
NUP120YKL057C YFR006WP43590 535 aa4.69□□□□□ -1.66
NUP120YKL057C UBP10P53874 792 aaPredicted RBP4.69□□□□□ -1.66
NUP120YKL057C BDF1P35817 686 aa4.66□□□□□ -1.66
NUP120YKL057C IFH1P39520 1085 aa4.66□□□□□ -1.66
NUP120YKL057C KIC1P38692 1080 aa4.66□□□□□ -1.66
NUP120YKL057C WSC3Q12215 556 aa4.63□□□□□ -1.67
NUP120YKL057C YOR238WQ08634 303 aa4.62□□□□□ -1.67
NUP120YKL057C SET1P38827 1080 aaKnown RBP4.62□□□□□ -1.67
NUP120YKL057C ATH1P48016 1211 aa4.61□□□□□ -1.67
NUP120YKL057C HGH1P48362 394 aaKnown RBP4.6□□□□□ -1.67
NUP120YKL057C DBP1P24784 617 aaKnown RBP4.59□□□□□ -1.67
NUP120YKL057C PSD2P53037 1138 aaKnown RBP4.59□□□□□ -1.68
NUP120YKL057C YAP5P40574 245 aa4.57□□□□□ -1.68
NUP120YKL057C ATF2P53296 535 aa4.56□□□□□ -1.68
NUP120YKL057C YMR1P47147 688 aaKnown RBP RIP-Chip data4.55□□□□□ -1.68not detected
NUP120YKL057C CKB1P43639 278 aa4.55□□□□□ -1.68
NUP120YKL057C PEX29Q03370 554 aa4.55□□□□□ -1.68
NUP120YKL057C TFG1P41895 735 aaPredicted RBP4.54□□□□□ -1.68
NUP120YKL057C RPP1BP10622 106 aaKnown RBP4.53□□□□□ -1.68
NUP120YKL057C RCR1P38212 213 aa4.52□□□□□ -1.69
NUP120YKL057C RAM2P29703 316 aa4.52□□□□□ -1.69
NUP120YKL057C DCW1P36091 449 aa4.52□□□□□ -1.69
NUP120YKL057C COQ8P27697 501 aa4.51□□□□□ -1.69
NUP120YKL057C GRE2Q12068 342 aaKnown RBP4.51□□□□□ -1.69
NUP120YKL057C UBP9P39967 754 aa4.5□□□□□ -1.69
NUP120YKL057C SET4P42948 560 aa4.5□□□□□ -1.69
NUP120YKL057C PEX21P50091 288 aa4.5□□□□□ -1.69
NUP120YKL057C GYP5Q12344 894 aa4.49□□□□□ -1.69
NUP120YKL057C YCK3P39962 524 aa4.49□□□□□ -1.69
NUP120YKL057C MAK11P20484 414 aaKnown RBP4.48□□□□□ -1.69
NUP120YKL057C MAM3Q12296 706 aa4.46□□□□□ -1.69
NUP120YKL057C VHR2P40041 505 aa4.46□□□□□ -1.7
NUP120YKL057C YMR196WQ04336 1088 aa4.46□□□□□ -1.7
NUP120YKL057C RPN1P38764 993 aaKnown RBP4.45□□□□□ -1.7
NUP120YKL057C RPL34BP40525 121 aaKnown RBP4.45□□□□□ -1.7
NUP120YKL057C REF2P42073 533 aaPredicted RBP4.44□□□□□ -1.7
NUP120YKL057C PBS2P08018 668 aa4.44□□□□□ -1.7
NUP120YKL057C TAF7Q05021 590 aa4.44□□□□□ -1.7
NUP120YKL057C RAD54P32863 898 aa4.43□□□□□ -1.7
NUP120YKL057C IES2P40154 320 aa4.43□□□□□ -1.7
NUP120YKL057C LEO1P38439 464 aa4.41□□□□□ -1.7
NUP120YKL057C TGL3P40308 642 aa4.41□□□□□ -1.7
NUP120YKL057C SPP1Q03012 353 aa4.4□□□□□ -1.7
NUP120YKL057C HTA1P04911 132 aaKnown RBP4.39□□□□□ -1.71
NUP120YKL057C HTA2P04912 132 aa4.39□□□□□ -1.71
NUP120YKL057C GLC3P32775 704 aa4.39□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms