RNA–Protein interactions for RNA: YKL011C

CCE1, Transcript of Mitochondrial cruciform cutting endonuclease, yeastyeast

Gene CCE1, Length 1,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCE1YKL011C INM2Q05533 292 aa2.15□□□□□ -2.07
CCE1YKL011C YPR172WQ06608 200 aa2.15□□□□□ -2.07
CCE1YKL011C MSA1Q08471 629 aa2.15□□□□□ -2.07
CCE1YKL011C YPL229WQ99395 206 aa2.15□□□□□ -2.07
CCE1YKL011C IPP1P00817 287 aaKnown RBP2.14□□□□□ -2.07
CCE1YKL011C YHR032W-AP0C5N6 59 aa2.14□□□□□ -2.07
CCE1YKL011C SCM4P32564 187 aa2.14□□□□□ -2.07
CCE1YKL011C VPS21P36017 210 aaKnown RBP2.14□□□□□ -2.07
CCE1YKL011C ARC15P40518 154 aaRIP-Chip data2.14□□□□□ -2.07not detected
CCE1YKL011C RPC17P47076 161 aa2.14□□□□□ -2.07
CCE1YKL011C Q0255P03881 472 aa2.13□□□□□ -2.07
CCE1YKL011C RHO1P06780 209 aaKnown RBP2.13□□□□□ -2.07
CCE1YKL011C SNA3P14359 133 aa2.13□□□□□ -2.07
CCE1YKL011C CCA1P21269 546 aa2.13□□□□□ -2.07
CCE1YKL011C YHR125WP38831 101 aa2.13□□□□□ -2.07
CCE1YKL011C RTR1P40084 226 aaPredicted RBP2.13□□□□□ -2.07
CCE1YKL011C SMD3P43321 101 aaKnown RBP2.13□□□□□ -2.07
CCE1YKL011C GTR2P53290 341 aa2.13□□□□□ -2.07
CCE1YKL011C YPL257WQ08974 193 aa2.13□□□□□ -2.07
CCE1YKL011C DSF1P0CX08 502 aa2.12□□□□□ -2.07
CCE1YKL011C YNR073CP0CX09 502 aa2.12□□□□□ -2.07
CCE1YKL011C SCO1P23833 295 aa2.12□□□□□ -2.07
CCE1YKL011C CDC10P25342 322 aaKnown RBP2.12□□□□□ -2.07
CCE1YKL011C NTF2P33331 125 aaKnown RBP2.12□□□□□ -2.07
CCE1YKL011C MNN5P46982 586 aa2.12□□□□□ -2.07
CCE1YKL011C SNX4P47057 423 aa2.12□□□□□ -2.07
CCE1YKL011C TRM9P49957 279 aa2.12□□□□□ -2.07
CCE1YKL011C RMR1P53060 241 aa2.12□□□□□ -2.07
CCE1YKL011C HTL1Q9URQ5 78 aa2.12□□□□□ -2.07
CCE1YKL011C COX5AP00424 153 aa2.11□□□□□ -2.07
CCE1YKL011C BMH2P34730 273 aaKnown RBP2.11□□□□□ -2.07
CCE1YKL011C MIC12P38341 106 aa2.11□□□□□ -2.07
CCE1YKL011C CAT5P41735 233 aa2.11□□□□□ -2.07
CCE1YKL011C MCM22P47167 239 aa2.11□□□□□ -2.07
CCE1YKL011C YJR149WP47177 404 aa2.11□□□□□ -2.07
CCE1YKL011C YMR279CQ03263 540 aa2.11□□□□□ -2.07
CCE1YKL011C CGI121Q03705 181 aaKnown RBP2.11□□□□□ -2.07
CCE1YKL011C RNH1Q04740 348 aa2.11□□□□□ -2.07
CCE1YKL011C DCR2Q05924 578 aa2.11□□□□□ -2.07
CCE1YKL011C EMC6Q12431 108 aa2.11□□□□□ -2.07
CCE1YKL011C THP2O13539 261 aaKnown RBP2.1□□□□□ -2.07
CCE1YKL011C BCY1P07278 416 aaKnown RBP2.1□□□□□ -2.07
CCE1YKL011C RPL24BP24000 155 aaKnown RBP2.1□□□□□ -2.07
CCE1YKL011C PPA2P28239 310 aa2.1□□□□□ -2.07
CCE1YKL011C VMA6P32366 345 aaKnown RBP2.1□□□□□ -2.07
CCE1YKL011C YPT52P36018 234 aaKnown RBP2.1□□□□□ -2.07
CCE1YKL011C CTR2P38865 189 aa2.1□□□□□ -2.07
CCE1YKL011C FIS1P40515 155 aa2.1□□□□□ -2.07
CCE1YKL011C ILM1P47155 203 aa2.1□□□□□ -2.07
CCE1YKL011C TOS8P53147 276 aa2.1□□□□□ -2.07
CCE1YKL011C YGR026WP53217 278 aa2.1□□□□□ -2.07
CCE1YKL011C NIP7Q08962 181 aaKnown RBP2.1□□□□□ -2.07
CCE1YKL011C MHT1Q12525 324 aa2.1□□□□□ -2.07
CCE1YKL011C YHR139C-AO13536 103 aa2.09□□□□□ -2.07
CCE1YKL011C ADH3P07246 375 aaKnown RBP2.09□□□□□ -2.07
CCE1YKL011C VMA11P32842 164 aa2.09□□□□□ -2.07
CCE1YKL011C YOR062CP36025 268 aa2.09□□□□□ -2.07
CCE1YKL011C RIB1P38066 345 aa2.09□□□□□ -2.07
CCE1YKL011C GRE3P38715 327 aaKnown RBP RIP-Chip data2.09□□□□□ -2.07not detected
CCE1YKL011C TCD1P38756 429 aa2.09□□□□□ -2.07
CCE1YKL011C COX15P40086 486 aa2.09□□□□□ -2.07
CCE1YKL011C OTU1P43558 301 aa2.09□□□□□ -2.07
CCE1YKL011C HAM1P47119 197 aaKnown RBP2.09□□□□□ -2.07
CCE1YKL011C DAN1P47178 298 aa2.09□□□□□ -2.07
CCE1YKL011C NSA1P53136 463 aaPredicted RBP2.09□□□□□ -2.07
CCE1YKL011C TIM11P81449 96 aaPredicted RBP2.09□□□□□ -2.07
CCE1YKL011C ATG39Q06159 398 aa2.09□□□□□ -2.07
CCE1YKL011C AKR2Q12013 749 aa2.09□□□□□ -2.07
CCE1YKL011C YOR283WQ12040 230 aaKnown RBP2.09□□□□□ -2.07
CCE1YKL011C RUD3Q12234 484 aaKnown RBP2.09□□□□□ -2.07
CCE1YKL011C SIR4P11978 1358 aa2.09□□□□□ -2.08
CCE1YKL011C YMR31P19955 123 aa2.08□□□□□ -2.08
CCE1YKL011C RPF1P38805 295 aaKnown RBP2.08□□□□□ -2.08
CCE1YKL011C PEX17P40155 199 aa2.08□□□□□ -2.08
CCE1YKL011C PRE6P40303 254 aaKnown RBP2.08□□□□□ -2.08
CCE1YKL011C RPA43P46669 326 aa2.08□□□□□ -2.08
CCE1YKL011C YML096WQ04489 525 aa2.08□□□□□ -2.08
CCE1YKL011C CDC123Q05791 360 aa2.08□□□□□ -2.08
CCE1YKL011C YOR020W-AQ3E824 90 aa2.08□□□□□ -2.08
CCE1YKL011C SPT3P06844 337 aa2.07□□□□□ -2.08
CCE1YKL011C PUT1P09368 476 aa2.07□□□□□ -2.08
CCE1YKL011C FCY2P17064 533 aa2.07□□□□□ -2.08
CCE1YKL011C URA8P38627 578 aaPredicted RBP2.07□□□□□ -2.08
CCE1YKL011C YAR068WP39564 161 aa2.07□□□□□ -2.08
CCE1YKL011C MSS2P40990 351 aa2.07□□□□□ -2.08
CCE1YKL011C GCN20P43535 752 aaKnown RBP2.07□□□□□ -2.08
CCE1YKL011C ERV29P53337 310 aa2.07□□□□□ -2.08
CCE1YKL011C TPO4Q12256 659 aa2.07□□□□□ -2.08
CCE1YKL011C NHP6BP11633 99 aaKnown RBP2.06□□□□□ -2.08
CCE1YKL011C PBN1P25580 416 aa2.06□□□□□ -2.08
CCE1YKL011C DOA4P32571 926 aa2.06□□□□□ -2.08
CCE1YKL011C SSO1P32867 290 aa2.06□□□□□ -2.08
CCE1YKL011C YBR063CP38083 404 aa2.06□□□□□ -2.08
CCE1YKL011C ECM33P38248 429 aaKnown RBP2.06□□□□□ -2.08
CCE1YKL011C RTC3P38804 111 aaPredicted RBP2.06□□□□□ -2.08
CCE1YKL011C YJR056CP47115 236 aa2.06□□□□□ -2.08
CCE1YKL011C ALG13P53178 202 aa2.06□□□□□ -2.08
CCE1YKL011C HEM25Q07534 307 aa2.06□□□□□ -2.08
CCE1YKL011C SEY1Q99287 776 aa2.06□□□□□ -2.08
CCE1YKL011C ARG80P07249 177 aa2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms