RNA–Protein interactions for RNA: YGR215W

RSM27, Transcript of Mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene RSM27, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSM27YGR215W YOR029WQ12243 111 aa1.68□□□□□ -2.14
RSM27YGR215W BFR1P38934 470 aaKnown RBP RIP-Chip data1.67□□□□□ -2.14not detected
RSM27YGR215W BMT5P40493 336 aa1.67□□□□□ -2.14
RSM27YGR215W FIS1P40515 155 aa1.67□□□□□ -2.14
RSM27YGR215W YGR219WP53307 113 aa1.67□□□□□ -2.14
RSM27YGR215W CYT2Q00873 224 aa1.67□□□□□ -2.14
RSM27YGR215W KAP95Q06142 861 aaKnown RBP1.67□□□□□ -2.14
RSM27YGR215W YPR172WQ06608 200 aa1.67□□□□□ -2.14
RSM27YGR215W YCT1Q12235 531 aa1.67□□□□□ -2.14
RSM27YGR215W SNU23Q12368 194 aaPredicted RBP1.67□□□□□ -2.14
RSM27YGR215W RRP36Q12481 300 aaPredicted RBP1.67□□□□□ -2.14
RSM27YGR215W TCP1P12612 559 aaKnown RBP1.66□□□□□ -2.14
RSM27YGR215W RSR1P13856 272 aa1.66□□□□□ -2.14
RSM27YGR215W MDH3P32419 343 aaKnown RBP RIP-Chip data1.66□□□□□ -2.14not detected
RSM27YGR215W PHO88P38264 188 aaPredicted RBP1.66□□□□□ -2.14
RSM27YGR215W DOG1P38774 246 aa1.66□□□□□ -2.14
RSM27YGR215W YHR127WP38833 243 aaKnown RBP1.66□□□□□ -2.14
RSM27YGR215W JHD2P47156 728 aaPredicted RBP1.66□□□□□ -2.14
RSM27YGR215W YNL046WP53956 172 aa1.66□□□□□ -2.14
RSM27YGR215W ATG39Q06159 398 aa1.66□□□□□ -2.14
RSM27YGR215W MSH5Q12175 901 aa1.66□□□□□ -2.14
RSM27YGR215W SIR4P11978 1358 aa1.66□□□□□ -2.14
RSM27YGR215W RPL9AP05738 191 aaKnown RBP1.65□□□□□ -2.15
RSM27YGR215W CDC7P06243 507 aa1.65□□□□□ -2.15
RSM27YGR215W YHR022CP38763 256 aa1.65□□□□□ -2.15
RSM27YGR215W PRM10P42946 383 aa1.65□□□□□ -2.15
RSM27YGR215W RPL9BP51401 191 aaKnown RBP1.65□□□□□ -2.15
RSM27YGR215W RMR1P53060 241 aa1.65□□□□□ -2.15
RSM27YGR215W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.65□□□□□ -2.15not detected
RSM27YGR215W MSA1Q08471 629 aa1.65□□□□□ -2.15
RSM27YGR215W MSW1P04803 379 aa1.64□□□□□ -2.15
RSM27YGR215W OAC1P32332 324 aa1.64□□□□□ -2.15
RSM27YGR215W YPT52P36018 234 aaKnown RBP1.64□□□□□ -2.15
RSM27YGR215W YAR068WP39564 161 aa1.64□□□□□ -2.15
RSM27YGR215W VTC1P40046 129 aaRIP-Chip data1.64□□□□□ -2.15not detected
RSM27YGR215W BNA6P43619 295 aa1.64□□□□□ -2.15
RSM27YGR215W ERG25P53045 309 aa1.64□□□□□ -2.15
RSM27YGR215W HTL1Q9URQ5 78 aa1.64□□□□□ -2.15
RSM27YGR215W SNA3P14359 133 aa1.63□□□□□ -2.15
RSM27YGR215W ERV15P38312 142 aa1.63□□□□□ -2.15
RSM27YGR215W YIL001WP40560 513 aa1.63□□□□□ -2.15
RSM27YGR215W RRT8Q08219 342 aa1.63□□□□□ -2.15
RSM27YGR215W CSM4Q08955 156 aa1.63□□□□□ -2.15
RSM27YGR215W NIP7Q08962 181 aaKnown RBP1.63□□□□□ -2.15
RSM27YGR215W YLR126CQ12288 251 aa1.63□□□□□ -2.15
RSM27YGR215W RPT5P33297 434 aaKnown RBP1.62□□□□□ -2.15
RSM27YGR215W YUH1P35127 236 aa1.62□□□□□ -2.15
RSM27YGR215W YHR180WP38868 163 aa1.62□□□□□ -2.15
RSM27YGR215W YJR079WP47126 109 aa1.62□□□□□ -2.15
RSM27YGR215W YNL134CP53912 376 aaKnown RBP1.62□□□□□ -2.15
RSM27YGR215W SEI1Q06058 285 aa1.62□□□□□ -2.15
RSM27YGR215W NEJ1Q06148 342 aa1.62□□□□□ -2.15
RSM27YGR215W YOL162WP0CF19 215 aa1.61□□□□□ -2.15
RSM27YGR215W FCY2P17064 533 aa1.61□□□□□ -2.15
RSM27YGR215W GRX2P17695 143 aaKnown RBP1.61□□□□□ -2.15
RSM27YGR215W RPS5P26783 225 aaKnown RBP1.61□□□□□ -2.15
RSM27YGR215W YKR045CP36138 183 aa1.61□□□□□ -2.15
RSM27YGR215W DSE2P38844 325 aa1.61□□□□□ -2.15
RSM27YGR215W YMR144WP40214 342 aaKnown RBP1.61□□□□□ -2.15
RSM27YGR215W CAT5P41735 233 aa1.61□□□□□ -2.15
RSM27YGR215W HEM25Q07534 307 aa1.61□□□□□ -2.15
RSM27YGR215W MDH2P22133 377 aa1.6□□□□□ -2.15
RSM27YGR215W YKE4P40544 346 aa1.6□□□□□ -2.15
RSM27YGR215W ARR2Q06597 130 aa1.6□□□□□ -2.15
RSM27YGR215W DCN1Q12395 269 aa1.6□□□□□ -2.15
RSM27YGR215W YPL229WQ99395 206 aa1.6□□□□□ -2.15
RSM27YGR215W ERD2P18414 219 aa1.59□□□□□ -2.15
RSM27YGR215W YBR219CP38317 127 aa1.59□□□□□ -2.15
RSM27YGR215W RPA43P46669 326 aa1.59□□□□□ -2.15
RSM27YGR215W YOR020W-AQ3E824 90 aa1.59□□□□□ -2.15
RSM27YGR215W DDI2P0CH63 225 aa1.58□□□□□ -2.16
RSM27YGR215W DDI3P0CH64 225 aa1.58□□□□□ -2.16
RSM27YGR215W ECM33P38248 429 aaKnown RBP1.58□□□□□ -2.16
RSM27YGR215W RPF1P38805 295 aaKnown RBP1.58□□□□□ -2.16
RSM27YGR215W AGE2P40529 298 aa1.58□□□□□ -2.16
RSM27YGR215W YJR056CP47115 236 aa1.58□□□□□ -2.16
RSM27YGR215W HAM1P47119 197 aaKnown RBP1.58□□□□□ -2.16
RSM27YGR215W HOC1P47124 396 aa1.58□□□□□ -2.16
RSM27YGR215W YLR173WQ06247 608 aa1.58□□□□□ -2.16
RSM27YGR215W PAM18Q07914 168 aa1.58□□□□□ -2.16
RSM27YGR215W UBR2Q07963 1872 aa1.58□□□□□ -2.16
RSM27YGR215W INO80P53115 1489 aa1.57□□□□□ -2.16
RSM27YGR215W YHR139C-AO13536 103 aa1.57□□□□□ -2.16
RSM27YGR215W YKL075CP36083 450 aa1.57□□□□□ -2.16
RSM27YGR215W ILM1P47155 203 aa1.57□□□□□ -2.16
RSM27YGR215W USB1Q12208 290 aaKnown RBP1.57□□□□□ -2.16
RSM27YGR215W ATG31Q12421 196 aa1.57□□□□□ -2.16
RSM27YGR215W RIB1P38066 345 aa1.56□□□□□ -2.16
RSM27YGR215W YER135CP40082 130 aa1.56□□□□□ -2.16
RSM27YGR215W MRPL50P53724 139 aa1.56□□□□□ -2.16
RSM27YGR215W SSQ1Q05931 657 aaPredicted RBP1.56□□□□□ -2.16
RSM27YGR215W PET9P18239 318 aaKnown RBP1.55□□□□□ -2.16
RSM27YGR215W YBR063CP38083 404 aa1.55□□□□□ -2.16
RSM27YGR215W GLE2P40066 365 aa1.55□□□□□ -2.16
RSM27YGR215W YML096WQ04489 525 aa1.55□□□□□ -2.16
RSM27YGR215W FLO9P39712 1322 aa1.55□□□□□ -2.16
RSM27YGR215W YPR170W-BP0C5R9 85 aa1.54□□□□□ -2.16
RSM27YGR215W RPL33BP41056 107 aaKnown RBP1.54□□□□□ -2.16
RSM27YGR215W YNR062CP53748 327 aa1.54□□□□□ -2.16
RSM27YGR215W LAP3Q01532 483 aaKnown RBP RIP-Chip data1.54□□□□□ -2.16not detected
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms