RNA–Protein interactions for RNA: YFR052W

RPN12, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeastyeast

Gene RPN12, Length 825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN12YFR052W HNM1P19807 563 aa4.25□□□□□ -1.73
RPN12YFR052W RPS5P26783 225 aaKnown RBP4.25□□□□□ -1.73
RPN12YFR052W PAU2P32612 120 aa4.25□□□□□ -1.73
RPN12YFR052W PPZ2P33329 710 aa4.25□□□□□ -1.73
RPN12YFR052W PCL6P40038 420 aa4.25□□□□□ -1.73
RPN12YFR052W YJL218WP40892 196 aaKnown RBP4.25□□□□□ -1.73
RPN12YFR052W YAE1P47118 141 aaPredicted RBP4.25□□□□□ -1.73
RPN12YFR052W DOC1P53068 250 aa4.25□□□□□ -1.73
RPN12YFR052W POP6P53218 158 aa4.25□□□□□ -1.73
RPN12YFR052W APJ1P53940 528 aa4.25□□□□□ -1.73
RPN12YFR052W BUD25P85052 153 aa4.25□□□□□ -1.73
RPN12YFR052W YKR005CQ02203 525 aa4.25□□□□□ -1.73
RPN12YFR052W YDR179W-AQ03983 463 aa4.25□□□□□ -1.73
RPN12YFR052W YLR283WQ05867 314 aa4.25□□□□□ -1.73
RPN12YFR052W RFU1Q08003 200 aa4.25□□□□□ -1.73
RPN12YFR052W CSI2Q08054 341 aa4.25□□□□□ -1.73
RPN12YFR052W FRE3Q08905 711 aa4.25□□□□□ -1.73
RPN12YFR052W USB1Q12208 290 aaKnown RBP4.25□□□□□ -1.73
RPN12YFR052W YOR029WQ12243 111 aa4.25□□□□□ -1.73
RPN12YFR052W RDL1Q12305 139 aaKnown RBP4.25□□□□□ -1.73
RPN12YFR052W GCN4P03069 281 aa4.24□□□□□ -1.73
RPN12YFR052W REP1P03871 373 aa4.24□□□□□ -1.73
RPN12YFR052W AHC2P25649 128 aa4.24□□□□□ -1.73
RPN12YFR052W CNE1P27825 502 aa4.24□□□□□ -1.73
RPN12YFR052W SFK1P35735 353 aa4.24□□□□□ -1.73
RPN12YFR052W RCN1P36054 211 aa4.24□□□□□ -1.73
RPN12YFR052W YBR137WP38276 179 aa4.24□□□□□ -1.73
RPN12YFR052W YHL044WP38727 235 aa4.24□□□□□ -1.73
RPN12YFR052W RMD6P39975 231 aa4.24□□□□□ -1.73
RPN12YFR052W RIO2P40160 425 aaKnown RBP4.24□□□□□ -1.73
RPN12YFR052W SLM1P40485 686 aa4.24□□□□□ -1.73
RPN12YFR052W BUD8P41698 603 aa4.24□□□□□ -1.73
RPN12YFR052W GON7P46984 123 aa4.24□□□□□ -1.73
RPN12YFR052W IMO32P53219 342 aa4.24□□□□□ -1.73
RPN12YFR052W YNL046WP53956 172 aa4.24□□□□□ -1.73
RPN12YFR052W YDR248CQ03786 193 aa4.24□□□□□ -1.73
RPN12YFR052W CAC2Q04199 468 aa4.24□□□□□ -1.73
RPN12YFR052W GMC1Q04399 608 aa4.24□□□□□ -1.73
RPN12YFR052W MGR3Q04472 501 aa4.24□□□□□ -1.73
RPN12YFR052W PEX30Q06169 523 aa4.24□□□□□ -1.73
RPN12YFR052W ATG17Q06410 417 aa4.24□□□□□ -1.73
RPN12YFR052W MDM36Q06820 579 aa4.24□□□□□ -1.73
RPN12YFR052W LUC7Q07508 261 aaPredicted RBP4.24□□□□□ -1.73
RPN12YFR052W HUT1Q12520 339 aa4.24□□□□□ -1.73
RPN12YFR052W SPO24Q3E752 67 aa4.24□□□□□ -1.73
RPN12YFR052W SNC2P33328 115 aa4.23□□□□□ -1.73
RPN12YFR052W DDI1P40087 428 aa4.23□□□□□ -1.73
RPN12YFR052W YHC3P47040 408 aa4.23□□□□□ -1.73
RPN12YFR052W NSA1P53136 463 aaPredicted RBP4.23□□□□□ -1.73
RPN12YFR052W FCY22Q12119 530 aa4.23□□□□□ -1.73
RPN12YFR052W IES3Q12345 250 aa4.23□□□□□ -1.73
RPN12YFR052W MPD1Q12404 318 aaKnown RBP4.23□□□□□ -1.73
RPN12YFR052W EAF3Q12432 401 aa4.23□□□□□ -1.73
RPN12YFR052W HIS3P06633 220 aa4.22□□□□□ -1.73
RPN12YFR052W CDC31P06704 161 aaKnown RBP4.22□□□□□ -1.73
RPN12YFR052W MATALPHA1P0CY06 175 aa4.22□□□□□ -1.73
RPN12YFR052W HMLALPHA1P0CY07 175 aa4.22□□□□□ -1.73
RPN12YFR052W RFA1P22336 621 aaKnown RBP4.22□□□□□ -1.73
RPN12YFR052W HXT2P23585 541 aa4.22□□□□□ -1.73
RPN12YFR052W PET18P25362 215 aa4.22□□□□□ -1.73
RPN12YFR052W ARO4P32449 370 aaKnown RBP4.22□□□□□ -1.73
RPN12YFR052W RPD3P32561 433 aa4.22□□□□□ -1.73
RPN12YFR052W YBL010CP32788 280 aa4.22□□□□□ -1.73
RPN12YFR052W VMA11P32842 164 aa4.22□□□□□ -1.73
RPN12YFR052W YOX1P34161 385 aa4.22□□□□□ -1.73
RPN12YFR052W SHE2P36068 246 aaKnown RBP RIP-Chip data4.22□□□□□ -1.73not detected
RPN12YFR052W GPX2P38143 162 aa4.22□□□□□ -1.73
RPN12YFR052W RBL2P48606 106 aaKnown RBP4.22□□□□□ -1.73
RPN12YFR052W TAF4P50105 388 aa4.22□□□□□ -1.73
RPN12YFR052W UFD1P53044 361 aa4.22□□□□□ -1.73
RPN12YFR052W SCW4P53334 386 aaKnown RBP4.22□□□□□ -1.73
RPN12YFR052W YNR064CP53750 290 aa4.22□□□□□ -1.73
RPN12YFR052W SPO19Q03029 223 aa4.22□□□□□ -1.73
RPN12YFR052W UTP15Q04305 513 aaKnown RBP4.22□□□□□ -1.73
RPN12YFR052W PEX27Q08580 376 aa4.22□□□□□ -1.73
RPN12YFR052W ATG41Q12048 136 aa4.22□□□□□ -1.73
RPN12YFR052W TGS1Q12052 315 aa4.22□□□□□ -1.73
RPN12YFR052W LAS17Q12446 633 aa4.22□□□□□ -1.73
RPN12YFR052W CDC28P00546 298 aaKnown RBP4.21□□□□□ -1.74
RPN12YFR052W RPL25P04456 142 aaKnown RBP4.21□□□□□ -1.74
RPN12YFR052W YLL053CP0CD98 152 aa4.21□□□□□ -1.74
RPN12YFR052W IMP1P28627 190 aa4.21□□□□□ -1.74
RPN12YFR052W VAM7P32912 316 aa4.21□□□□□ -1.74
RPN12YFR052W TMA19P35691 167 aaKnown RBP4.21□□□□□ -1.74
RPN12YFR052W YKL063CP35725 167 aa4.21□□□□□ -1.74
RPN12YFR052W FIG1P38224 298 aa4.21□□□□□ -1.74
RPN12YFR052W UMP1P38293 148 aa4.21□□□□□ -1.74
RPN12YFR052W SGN1P40561 250 aaKnown RBP RIP-Chip data4.21□□□□□ -1.74not detected
RPN12YFR052W SSN8P47821 323 aa4.21□□□□□ -1.74
RPN12YFR052W FMP48P53233 369 aa4.21□□□□□ -1.74
RPN12YFR052W SMM1P53720 384 aaKnown RBP4.21□□□□□ -1.74
RPN12YFR052W CPR8P53728 308 aa4.21□□□□□ -1.74
RPN12YFR052W PIN3Q06449 215 aa4.21□□□□□ -1.74
RPN12YFR052W GPN3Q06543 272 aa4.21□□□□□ -1.74
RPN12YFR052W MCM21Q06675 368 aa4.21□□□□□ -1.74
RPN12YFR052W MRPL35Q06678 367 aa4.21□□□□□ -1.74
RPN12YFR052W MRX9Q07349 420 aaKnown RBP4.21□□□□□ -1.74
RPN12YFR052W YOR186WQ08560 144 aa4.21□□□□□ -1.74
RPN12YFR052W ERP4Q12450 207 aa4.21□□□□□ -1.74
RPN12YFR052W PET122P10355 254 aa4.2□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms