RNA–Protein interactions for RNA: YDL225W

SHS1, Transcript of Component of the septin ring that is required for cytokinesis, yeastyeast

Gene SHS1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHS1YDL225W YPR172WQ06608 200 aa1.74□□□□□ -2.13
SHS1YDL225W IPP1P00817 287 aaKnown RBP1.74□□□□□ -2.13
SHS1YDL225W MATALPHA1P0CY06 175 aa1.74□□□□□ -2.13
SHS1YDL225W HMLALPHA1P0CY07 175 aa1.74□□□□□ -2.13
SHS1YDL225W RPS5P26783 225 aaKnown RBP1.74□□□□□ -2.13
SHS1YDL225W YHR125WP38831 101 aa1.74□□□□□ -2.13
SHS1YDL225W SMD3P43321 101 aaKnown RBP1.74□□□□□ -2.13
SHS1YDL225W LIA1P47120 325 aaKnown RBP1.74□□□□□ -2.13
SHS1YDL225W DAN1P47178 298 aa1.74□□□□□ -2.13
SHS1YDL225W NUP84P52891 726 aa1.74□□□□□ -2.13
SHS1YDL225W MSA1Q08471 629 aa1.74□□□□□ -2.13
SHS1YDL225W YPL257WQ08974 193 aa1.74□□□□□ -2.13
SHS1YDL225W ERD2P18414 219 aa1.73□□□□□ -2.13
SHS1YDL225W MRPL25P23369 157 aa1.73□□□□□ -2.13
SHS1YDL225W GRE3P38715 327 aaKnown RBP RIP-Chip data1.73□□□□□ -2.13not detected
SHS1YDL225W YMR144WP40214 342 aaKnown RBP1.73□□□□□ -2.13
SHS1YDL225W GTR2P53290 341 aa1.73□□□□□ -2.13
SHS1YDL225W MHT1Q12525 324 aa1.73□□□□□ -2.13
SHS1YDL225W YPL229WQ99395 206 aa1.73□□□□□ -2.13
SHS1YDL225W COX5AP00424 153 aa1.72□□□□□ -2.13
SHS1YDL225W RPO26P20435 155 aa1.72□□□□□ -2.13
SHS1YDL225W VMA11P32842 164 aa1.72□□□□□ -2.13
SHS1YDL225W MSN4P33749 630 aa1.72□□□□□ -2.13
SHS1YDL225W YOR062CP36025 268 aa1.72□□□□□ -2.13
SHS1YDL225W CUE1P38428 203 aa1.72□□□□□ -2.13
SHS1YDL225W YER085CP40058 173 aa1.72□□□□□ -2.13
SHS1YDL225W RMR1P53060 241 aa1.72□□□□□ -2.13
SHS1YDL225W YGR026WP53217 278 aa1.72□□□□□ -2.13
SHS1YDL225W HTL1Q9URQ5 78 aa1.72□□□□□ -2.13
SHS1YDL225W DSF1P0CX08 502 aa1.71□□□□□ -2.14
SHS1YDL225W YNR073CP0CX09 502 aa1.71□□□□□ -2.14
SHS1YDL225W SNA3P14359 133 aa1.71□□□□□ -2.14
SHS1YDL225W CTR2P38865 189 aa1.71□□□□□ -2.14
SHS1YDL225W FIS1P40515 155 aa1.71□□□□□ -2.14
SHS1YDL225W YMR279CQ03263 540 aa1.71□□□□□ -2.14
SHS1YDL225W PUT1P09368 476 aa1.71□□□□□ -2.14
SHS1YDL225W DOA4P32571 926 aa1.71□□□□□ -2.14
SHS1YDL225W VPS21P36017 210 aaKnown RBP1.71□□□□□ -2.14
SHS1YDL225W NRG2P38082 220 aa1.71□□□□□ -2.14
SHS1YDL225W CAT5P41735 233 aa1.71□□□□□ -2.14
SHS1YDL225W RPC17P47076 161 aa1.71□□□□□ -2.14
SHS1YDL225W NOP13P53883 403 aaKnown RBP RIP-Chip data1.71□□□□□ -2.14not detected
SHS1YDL225W DCR2Q05924 578 aa1.71□□□□□ -2.14
SHS1YDL225W ATG39Q06159 398 aa1.71□□□□□ -2.14
SHS1YDL225W ADH3P07246 375 aaKnown RBP1.7□□□□□ -2.14
SHS1YDL225W YPT52P36018 234 aaKnown RBP1.7□□□□□ -2.14
SHS1YDL225W FCY21P40039 528 aa1.7□□□□□ -2.14
SHS1YDL225W ILM1P47155 203 aa1.7□□□□□ -2.14
SHS1YDL225W MCM22P47167 239 aa1.7□□□□□ -2.14
SHS1YDL225W YJR149WP47177 404 aa1.7□□□□□ -2.14
SHS1YDL225W TRM9P49957 279 aa1.7□□□□□ -2.14
SHS1YDL225W NIP7Q08962 181 aaKnown RBP1.7□□□□□ -2.14
SHS1YDL225W AKR2Q12013 749 aa1.7□□□□□ -2.14
SHS1YDL225W YHR139C-AO13536 103 aa1.69□□□□□ -2.14
SHS1YDL225W CDC10P25342 322 aaKnown RBP1.69□□□□□ -2.14
SHS1YDL225W NTF2P33331 125 aaKnown RBP1.69□□□□□ -2.14
SHS1YDL225W RPF1P38805 295 aaKnown RBP1.69□□□□□ -2.14
SHS1YDL225W RPA43P46669 326 aa1.69□□□□□ -2.14
SHS1YDL225W PRM15Q03262 622 aa1.69□□□□□ -2.14
SHS1YDL225W YHR086W-AQ3E746 53 aa1.69□□□□□ -2.14
SHS1YDL225W YJL027CP47063 138 aaPredicted RBP1.68□□□□□ -2.14
SHS1YDL225W HAM1P47119 197 aaKnown RBP1.68□□□□□ -2.14
SHS1YDL225W TOS8P53147 276 aa1.68□□□□□ -2.14
SHS1YDL225W ATO3Q12359 275 aa1.68□□□□□ -2.14
SHS1YDL225W YOR020W-AQ3E824 90 aa1.68□□□□□ -2.14
SHS1YDL225W RHO1P06780 209 aaKnown RBP1.67□□□□□ -2.14
SHS1YDL225W BCY1P07278 416 aaKnown RBP1.67□□□□□ -2.14
SHS1YDL225W FCY2P17064 533 aa1.67□□□□□ -2.14
SHS1YDL225W RIB1P38066 345 aa1.67□□□□□ -2.14
SHS1YDL225W YBR063CP38083 404 aa1.67□□□□□ -2.14
SHS1YDL225W YML096WQ04489 525 aa1.67□□□□□ -2.14
SHS1YDL225W THP2O13539 261 aaKnown RBP1.67□□□□□ -2.14
SHS1YDL225W RPL24BP24000 155 aaKnown RBP1.67□□□□□ -2.14
SHS1YDL225W PPA2P28239 310 aa1.67□□□□□ -2.14
SHS1YDL225W VMA6P32366 345 aaKnown RBP1.67□□□□□ -2.14
SHS1YDL225W DOG1P38774 246 aa1.67□□□□□ -2.14
SHS1YDL225W YAR068WP39564 161 aa1.67□□□□□ -2.14
SHS1YDL225W RTR1P40084 226 aaPredicted RBP1.67□□□□□ -2.14
SHS1YDL225W NSA1P53136 463 aaPredicted RBP1.67□□□□□ -2.14
SHS1YDL225W ERV29P53337 310 aa1.67□□□□□ -2.14
SHS1YDL225W ABF2Q02486 183 aa1.67□□□□□ -2.14
SHS1YDL225W SIR4P11978 1358 aa1.67□□□□□ -2.14
SHS1YDL225W SPT3P06844 337 aa1.66□□□□□ -2.14
SHS1YDL225W ECM33P38248 429 aaKnown RBP1.66□□□□□ -2.14
SHS1YDL225W MIC12P38341 106 aa1.66□□□□□ -2.14
SHS1YDL225W PEX17P40155 199 aa1.66□□□□□ -2.14
SHS1YDL225W PRE6P40303 254 aaKnown RBP1.66□□□□□ -2.14
SHS1YDL225W YJR056CP47115 236 aa1.66□□□□□ -2.14
SHS1YDL225W SSQ1Q05931 657 aaPredicted RBP1.66□□□□□ -2.14
SHS1YDL225W TPO4Q12256 659 aa1.66□□□□□ -2.14
SHS1YDL225W RPL9AP05738 191 aaKnown RBP1.65□□□□□ -2.15
SHS1YDL225W GRX2P17695 143 aaKnown RBP1.65□□□□□ -2.15
SHS1YDL225W YMR31P19955 123 aa1.65□□□□□ -2.15
SHS1YDL225W COX15P40086 486 aa1.65□□□□□ -2.15
SHS1YDL225W RPL9BP51401 191 aaKnown RBP1.65□□□□□ -2.15
SHS1YDL225W MRPS8Q03799 155 aa1.65□□□□□ -2.15
SHS1YDL225W CDC123Q05791 360 aa1.65□□□□□ -2.15
SHS1YDL225W ARR2Q06597 130 aa1.65□□□□□ -2.15
SHS1YDL225W MSW1P04803 379 aa1.64□□□□□ -2.15
SHS1YDL225W SSO1P32867 290 aa1.64□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms