RNA–Protein interactions for RNA: YCR092C

MSH3, Transcript of Mismatch repair protein, yeastyeast

Gene MSH3, Length 3,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH3YCR092C ALK2P32789 676 aaPredicted RBP1.15□□□□□ -2.23
MSH3YCR092C ADH5P38113 351 aaKnown RBP1.15□□□□□ -2.23
MSH3YCR092C CHL4P38907 458 aa1.15□□□□□ -2.23
MSH3YCR092C AST2P39945 430 aaKnown RBP1.15□□□□□ -2.23
MSH3YCR092C PHM8P40025 321 aa1.15□□□□□ -2.23
MSH3YCR092C GCN20P43535 752 aaKnown RBP1.15□□□□□ -2.23
MSH3YCR092C UPF3P48412 387 aaKnown RBP1.15□□□□□ -2.23
MSH3YCR092C PUS4P48567 403 aaKnown RBP1.15□□□□□ -2.23
MSH3YCR092C CDH1P53197 566 aa1.15□□□□□ -2.23
MSH3YCR092C BIO4P53630 237 aa1.15□□□□□ -2.23
MSH3YCR092C NRK1P53915 240 aa1.15□□□□□ -2.23
MSH3YCR092C SRL4Q03085 281 aa1.15□□□□□ -2.23
MSH3YCR092C SNO1Q03144 224 aa1.15□□□□□ -2.23
MSH3YCR092C ACL4Q03771 387 aa1.15□□□□□ -2.23
MSH3YCR092C HFD1Q04458 532 aa1.15□□□□□ -2.23
MSH3YCR092C YDR278CQ05612 105 aa1.15□□□□□ -2.23
MSH3YCR092C YLR173WQ06247 608 aa1.15□□□□□ -2.23
MSH3YCR092C YDL114WQ07530 308 aa1.15□□□□□ -2.23
MSH3YCR092C SRL1Q08673 210 aa1.15□□□□□ -2.23
MSH3YCR092C VIK1Q12045 647 aa1.15□□□□□ -2.23
MSH3YCR092C YPR010C-AA5Z2X5 72 aa1.14□□□□□ -2.23
MSH3YCR092C THP2O13539 261 aaKnown RBP1.14□□□□□ -2.23
MSH3YCR092C MES1P00958 751 aaKnown RBP1.14□□□□□ -2.23
MSH3YCR092C ERD2P18414 219 aa1.14□□□□□ -2.23
MSH3YCR092C PDB1P32473 366 aaKnown RBP1.14□□□□□ -2.23
MSH3YCR092C DOA4P32571 926 aa1.14□□□□□ -2.23
MSH3YCR092C SDH3P33421 198 aa1.14□□□□□ -2.23
MSH3YCR092C SPI1P40092 148 aa1.14□□□□□ -2.23
MSH3YCR092C SYG1P40528 902 aa1.14□□□□□ -2.23
MSH3YCR092C YJL213WP40896 331 aa1.14□□□□□ -2.23
MSH3YCR092C PTR3P43606 678 aa1.14□□□□□ -2.23
MSH3YCR092C CTK2P46962 323 aa1.14□□□□□ -2.23
MSH3YCR092C COX16P47081 118 aa1.14□□□□□ -2.23
MSH3YCR092C YJR011CP47086 261 aaPredicted RBP1.14□□□□□ -2.23
MSH3YCR092C AVT4P50944 713 aa1.14□□□□□ -2.23
MSH3YCR092C ERP6P53198 216 aa1.14□□□□□ -2.23
MSH3YCR092C CRH1P53301 507 aa1.14□□□□□ -2.23
MSH3YCR092C PAU12P53343 120 aa1.14□□□□□ -2.23
MSH3YCR092C SSU72P53538 206 aaPredicted RBP1.14□□□□□ -2.23
MSH3YCR092C DUG3P53871 357 aa1.14□□□□□ -2.23
MSH3YCR092C VPS71Q03433 280 aa1.14□□□□□ -2.23
MSH3YCR092C DML1Q03652 475 aa1.14□□□□□ -2.23
MSH3YCR092C PEX30Q06169 523 aa1.14□□□□□ -2.23
MSH3YCR092C YPL119C-AQ3E751 87 aa1.14□□□□□ -2.23
MSH3YCR092C BOL1Q3E793 110 aa1.14□□□□□ -2.23
MSH3YCR092C FMP27Q06179 2628 aa1.14□□□□□ -2.23
MSH3YCR092C BLM10P43583 2143 aa1.14□□□□□ -2.23
MSH3YCR092C URA3P03962 267 aa1.14□□□□□ -2.23
MSH3YCR092C ATP4P05626 244 aa1.14□□□□□ -2.23
MSH3YCR092C ECM25P32525 599 aa1.14□□□□□ -2.23
MSH3YCR092C REC104P33323 182 aa1.14□□□□□ -2.23
MSH3YCR092C TIF3P34167 436 aaKnown RBP1.14□□□□□ -2.23
MSH3YCR092C UPS2P35200 230 aa1.14□□□□□ -2.23
MSH3YCR092C YKR015CP36111 568 aa1.14□□□□□ -2.23
MSH3YCR092C NTC20P38302 140 aaPredicted RBP1.14□□□□□ -2.23
MSH3YCR092C RGI1P40043 161 aaPredicted RBP1.14□□□□□ -2.23
MSH3YCR092C MEP2P41948 499 aa1.14□□□□□ -2.23
MSH3YCR092C CAF16P43569 289 aa1.14□□□□□ -2.23
MSH3YCR092C YKR011CQ02209 353 aa1.14□□□□□ -2.23
MSH3YCR092C SPO19Q03029 223 aa1.14□□□□□ -2.23
MSH3YCR092C SPC24Q04477 213 aa1.14□□□□□ -2.23
MSH3YCR092C DYN3Q04949 312 aa1.14□□□□□ -2.23
MSH3YCR092C NNT1Q05874 261 aa1.14□□□□□ -2.23
MSH3YCR092C ARV1Q06541 321 aa1.14□□□□□ -2.23
MSH3YCR092C SSK1Q07084 712 aa1.14□□□□□ -2.23
MSH3YCR092C YPR1Q12458 312 aa1.14□□□□□ -2.23
MSH3YCR092C PCL9Q12477 304 aa1.14□□□□□ -2.23
MSH3YCR092C HFA1P32874 2273 aa1.14□□□□□ -2.23
MSH3YCR092C VPS63O13549 108 aa1.14□□□□□ -2.23
MSH3YCR092C ERG2P32352 222 aa1.14□□□□□ -2.23
MSH3YCR092C AUA1P32450 94 aa1.14□□□□□ -2.23
MSH3YCR092C AUR1P36107 401 aaPredicted RBP1.14□□□□□ -2.23
MSH3YCR092C GOS1P38736 223 aa1.14□□□□□ -2.23
MSH3YCR092C FMP52P40008 231 aa1.14□□□□□ -2.23
MSH3YCR092C THO1P40040 218 aaKnown RBP1.14□□□□□ -2.23
MSH3YCR092C RTT105P40063 208 aa1.14□□□□□ -2.23
MSH3YCR092C SHO1P40073 367 aa1.14□□□□□ -2.23
MSH3YCR092C MET28P40573 187 aa1.14□□□□□ -2.23
MSH3YCR092C FAR7P43592 221 aa1.14□□□□□ -2.23
MSH3YCR092C YIP1P53039 248 aa1.14□□□□□ -2.23
MSH3YCR092C YGR016WP53209 190 aa1.14□□□□□ -2.23
MSH3YCR092C RSM27P53305 110 aa1.14□□□□□ -2.23
MSH3YCR092C MRP51Q02950 344 aa1.14□□□□□ -2.23
MSH3YCR092C RRP17Q04031 235 aaPredicted RBP1.14□□□□□ -2.23
MSH3YCR092C ELP6Q04868 273 aa1.14□□□□□ -2.23
MSH3YCR092C VPS36Q06696 566 aa1.14□□□□□ -2.23
MSH3YCR092C MDM36Q06820 579 aa1.14□□□□□ -2.23
MSH3YCR092C ASA1Q06822 443 aa1.14□□□□□ -2.23
MSH3YCR092C IZH3Q07959 543 aa1.14□□□□□ -2.23
MSH3YCR092C CSI2Q08054 341 aa1.14□□□□□ -2.23
MSH3YCR092C VAM10Q08474 114 aa1.14□□□□□ -2.23
MSH3YCR092C SKI7Q08491 747 aaPredicted RBP1.14□□□□□ -2.23
MSH3YCR092C CHS5Q12114 671 aaKnown RBP1.14□□□□□ -2.23
MSH3YCR092C TRM10Q12400 293 aa1.14□□□□□ -2.23
MSH3YCR092C MDH1P17505 334 aaKnown RBP RIP-Chip data1.13□□□□□ -2.23not detected
MSH3YCR092C LSB5P25369 354 aa1.13□□□□□ -2.23
MSH3YCR092C BOS1P25385 244 aa1.13□□□□□ -2.23
MSH3YCR092C SDS22P36047 338 aa1.13□□□□□ -2.23
MSH3YCR092C AIM2P39721 246 aa1.13□□□□□ -2.23
MSH3YCR092C YER121WP40076 114 aa1.13□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 31.9 ms