RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeastyeast

Gene ATG3, Length 933 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG3YNR007C CWC25P53854 179 aaKnown RBP2.52□□□□□ -2.01
ATG3YNR007C PET191Q02772 108 aa2.52□□□□□ -2.01
ATG3YNR007C SPO77Q06134 477 aa2.52□□□□□ -2.01
ATG3YNR007C MDM36Q06820 579 aa2.52□□□□□ -2.01
ATG3YNR007C IRC19Q07843 230 aa2.52□□□□□ -2.01
ATG3YNR007C LOT6Q07923 191 aa2.52□□□□□ -2.01
ATG3YNR007C YDL109CQ12103 647 aa2.52□□□□□ -2.01
ATG3YNR007C MCP1Q12106 302 aa2.52□□□□□ -2.01
ATG3YNR007C JLP1Q12358 412 aa2.52□□□□□ -2.01
ATG3YNR007C SNF8Q12483 233 aa2.52□□□□□ -2.01
ATG3YNR007C TFB5Q3E7C1 72 aaPredicted RBP2.52□□□□□ -2.01
ATG3YNR007C SOD1P00445 154 aaKnown RBP2.51□□□□□ -2.01
ATG3YNR007C TRP1P00912 224 aa2.51□□□□□ -2.01
ATG3YNR007C RHO1P06780 209 aaKnown RBP2.51□□□□□ -2.01
ATG3YNR007C MER1P16523 270 aa2.51□□□□□ -2.01
ATG3YNR007C POP5P28005 173 aa2.51□□□□□ -2.01
ATG3YNR007C MNS1P32906 549 aa2.51□□□□□ -2.01
ATG3YNR007C RCK1P38622 512 aa2.51□□□□□ -2.01
ATG3YNR007C STP2P38704 541 aa2.51□□□□□ -2.01
ATG3YNR007C SIM1P40472 476 aa2.51□□□□□ -2.01
ATG3YNR007C AVT7P40501 490 aa2.51□□□□□ -2.01
ATG3YNR007C ABM1P47146 123 aa2.51□□□□□ -2.01
ATG3YNR007C NUP57P48837 541 aa2.51□□□□□ -2.01
ATG3YNR007C TPC1P53257 314 aa2.51□□□□□ -2.01
ATG3YNR007C YGR168CP53293 376 aa2.51□□□□□ -2.01
ATG3YNR007C MTM1P53320 366 aa2.51□□□□□ -2.01
ATG3YNR007C YNR068CP53754 272 aa2.51□□□□□ -2.01
ATG3YNR007C FMN1Q03778 218 aa2.51□□□□□ -2.01
ATG3YNR007C DYN3Q04949 312 aa2.51□□□□□ -2.01
ATG3YNR007C DBP9Q06218 594 aaKnown RBP2.51□□□□□ -2.01
ATG3YNR007C IPK1Q06667 281 aa2.51□□□□□ -2.01
ATG3YNR007C RRG7Q08774 242 aaPredicted RBP2.51□□□□□ -2.01
ATG3YNR007C NIP7Q08962 181 aaKnown RBP2.51□□□□□ -2.01
ATG3YNR007C YDL180WQ12301 547 aa2.51□□□□□ -2.01
ATG3YNR007C RNH203Q12338 110 aa2.51□□□□□ -2.01
ATG3YNR007C YAL064W-BO13512 126 aa2.5□□□□□ -2.01
ATG3YNR007C ATP6P00854 259 aa2.5□□□□□ -2.01
ATG3YNR007C MSW1P04803 379 aa2.5□□□□□ -2.01
ATG3YNR007C HEM4P06174 275 aa2.5□□□□□ -2.01
ATG3YNR007C RPL12AP0CX53 165 aaKnown RBP2.5□□□□□ -2.01
ATG3YNR007C RPL12BP0CX54 165 aa2.5□□□□□ -2.01
ATG3YNR007C UGA1P17649 471 aa2.5□□□□□ -2.01
ATG3YNR007C CCA1P21269 546 aa2.5□□□□□ -2.01
ATG3YNR007C TFC1P32367 649 aa2.5□□□□□ -2.01
ATG3YNR007C MSN4P33749 630 aa2.5□□□□□ -2.01
ATG3YNR007C SPT10P35208 640 aa2.5□□□□□ -2.01
ATG3YNR007C FZO1P38297 855 aa2.5□□□□□ -2.01
ATG3YNR007C YHR180WP38868 163 aa2.5□□□□□ -2.01
ATG3YNR007C RCY1P39531 840 aa2.5□□□□□ -2.01
ATG3YNR007C YIL029CP40538 142 aa2.5□□□□□ -2.01
ATG3YNR007C SHE4P51534 789 aa2.5□□□□□ -2.01
ATG3YNR007C MIG2P53035 382 aa2.5□□□□□ -2.01
ATG3YNR007C COS6P53344 381 aa2.5□□□□□ -2.01
ATG3YNR007C MTQ1P53944 314 aa2.5□□□□□ -2.01
ATG3YNR007C YLR152CP54072 576 aa2.5□□□□□ -2.01
ATG3YNR007C MEH1Q02205 184 aa2.5□□□□□ -2.01
ATG3YNR007C YPL107WQ02873 248 aa2.5□□□□□ -2.01
ATG3YNR007C RRN5Q02983 363 aa2.5□□□□□ -2.01
ATG3YNR007C SEC13Q04491 297 aaKnown RBP2.5□□□□□ -2.01
ATG3YNR007C SEI1Q06058 285 aa2.5□□□□□ -2.01
ATG3YNR007C BCP1Q06338 283 aa2.5□□□□□ -2.01
ATG3YNR007C COQ10Q08058 207 aa2.5□□□□□ -2.01
ATG3YNR007C BRX1Q08235 291 aaKnown RBP2.5□□□□□ -2.01
ATG3YNR007C RDL2Q08742 149 aaKnown RBP2.5□□□□□ -2.01
ATG3YNR007C RTC5Q12108 567 aaKnown RBP2.5□□□□□ -2.01
ATG3YNR007C YDL211CQ12121 372 aa2.5□□□□□ -2.01
ATG3YNR007C YRA1Q12159 226 aaKnown RBP2.5□□□□□ -2.01
ATG3YNR007C MHF2Q3E829 80 aa2.5□□□□□ -2.01
ATG3YNR007C CYC3P06182 269 aa2.49□□□□□ -2.01
ATG3YNR007C YOL163WP0CF20 169 aa2.49□□□□□ -2.01
ATG3YNR007C HSP150P32478 413 aa2.49□□□□□ -2.01
ATG3YNR007C JEN1P36035 616 aa2.49□□□□□ -2.01
ATG3YNR007C HEK2P38199 381 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
ATG3YNR007C YGP1P38616 354 aaKnown RBP2.49□□□□□ -2.01
ATG3YNR007C YHL037CP38733 133 aa2.49□□□□□ -2.01
ATG3YNR007C FET3P38993 636 aa2.49□□□□□ -2.01
ATG3YNR007C MAM33P40513 266 aa2.49□□□□□ -2.01
ATG3YNR007C YGL101WP53144 215 aa2.49□□□□□ -2.01
ATG3YNR007C MPC1P53157 130 aaKnown RBP2.49□□□□□ -2.01
ATG3YNR007C CDH1P53197 566 aa2.49□□□□□ -2.01
ATG3YNR007C MPA43P53583 542 aaPredicted RBP2.49□□□□□ -2.01
ATG3YNR007C APJ1P53940 528 aa2.49□□□□□ -2.01
ATG3YNR007C SNX41Q04053 625 aa2.49□□□□□ -2.01
ATG3YNR007C PEX12Q04370 399 aa2.49□□□□□ -2.01
ATG3YNR007C COX20Q04935 205 aa2.49□□□□□ -2.01
ATG3YNR007C YPR127WQ06494 345 aa2.49□□□□□ -2.01
ATG3YNR007C TAZ1Q06510 381 aa2.49□□□□□ -2.01
ATG3YNR007C IRC25Q07951 179 aa2.49□□□□□ -2.01
ATG3YNR007C YOL131WQ08270 108 aa2.49□□□□□ -2.01
ATG3YNR007C SLF1Q12034 447 aaKnown RBP2.49□□□□□ -2.01
ATG3YNR007C YDL199CQ12407 687 aa2.49□□□□□ -2.01
ATG3YNR007C FRE6Q12473 712 aa2.49□□□□□ -2.01
ATG3YNR007C YKL068W-AQ3E826 78 aa2.49□□□□□ -2.01
ATG3YNR007C DET1Q99288 334 aaKnown RBP2.49□□□□□ -2.01
ATG3YNR007C TPK3P05986 398 aa2.48□□□□□ -2.01
ATG3YNR007C PIS1P06197 220 aaKnown RBP2.48□□□□□ -2.01
ATG3YNR007C NAM2P11325 894 aa2.48□□□□□ -2.01
ATG3YNR007C CAP2P13517 287 aa2.48□□□□□ -2.01
ATG3YNR007C CMK2P22517 447 aa2.48□□□□□ -2.01
ATG3YNR007C EXG1P23776 448 aaKnown RBP2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 156.2 ms