RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	YHR035W	P38769	630 aa		3.09	□□□□□ -1.91
TPM1	YNL079C	YHK8	P38776	514 aa		3.09	□□□□□ -1.91
TPM1	YNL079C	TRR2	P38816	342 aa		3.09	□□□□□ -1.91
TPM1	YNL079C	ALP1	P38971	573 aa		3.09	□□□□□ -1.91
TPM1	YNL079C	GAT2	P40209	560 aa		3.09	□□□□□ -1.91
TPM1	YNL079C	REE1	P40893	198 aa		3.09	□□□□□ -1.91
TPM1	YNL079C	CIS3	P47001	227 aa		3.09	□□□□□ -1.91
TPM1	YNL079C	YAE1	P47118	141 aa	Predicted RBP	3.09	□□□□□ -1.91
TPM1	YNL079C	BAT2	P47176	376 aa	Known RBP	3.09	□□□□□ -1.91
TPM1	YNL079C	TOS2	P50078	622 aa		3.09	□□□□□ -1.91
TPM1	YNL079C	CWC23	P52868	283 aa	Predicted RBP	3.09	□□□□□ -1.91
TPM1	YNL079C	MTM1	P53320	366 aa		3.09	□□□□□ -1.91
TPM1	YNL079C	MKC7	P53379	596 aa		3.09	□□□□□ -1.91
TPM1	YNL079C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	3.09	□□□□□ -1.91	RIP-Chip
TPM1	YNL079C	OST6	Q03723	332 aa		3.09	□□□□□ -1.91
TPM1	YNL079C	SMA2	Q04658	369 aa		3.09	□□□□□ -1.91
TPM1	YNL079C	PEX10	Q05568	337 aa		3.09	□□□□□ -1.91
TPM1	YNL079C	YLR456W	Q06199	204 aa		3.09	□□□□□ -1.91
TPM1	YNL079C	UIP4	Q08926	304 aa		3.09	□□□□□ -1.91
TPM1	YNL079C	TPO4	Q12256	659 aa		3.09	□□□□□ -1.91
TPM1	YNL079C	YOR214C	Q12282	236 aa		3.09	□□□□□ -1.91
TPM1	YNL079C	DPM1	P14020	267 aa	Known RBP	3.08	□□□□□ -1.92
TPM1	YNL079C	CHA1	P25379	360 aa	Known RBP	3.08	□□□□□ -1.92
TPM1	YNL079C	ARO2	P28777	376 aa	Known RBP	3.08	□□□□□ -1.92
TPM1	YNL079C	SUR1	P33300	382 aa		3.08	□□□□□ -1.92
TPM1	YNL079C	ZRT3	P34240	503 aa		3.08	□□□□□ -1.92
TPM1	YNL079C	RCN1	P36054	211 aa		3.08	□□□□□ -1.92
TPM1	YNL079C	VPS51	P36116	164 aa		3.08	□□□□□ -1.92
TPM1	YNL079C	RTC2	P38279	296 aa		3.08	□□□□□ -1.92
TPM1	YNL079C	IPI1	P38803	334 aa	Predicted RBP	3.08	□□□□□ -1.92
TPM1	YNL079C	PTH1	P38876	190 aa	Known RBP	3.08	□□□□□ -1.92
TPM1	YNL079C	NVJ1	P38881	321 aa		3.08	□□□□□ -1.92
TPM1	YNL079C	CHL4	P38907	458 aa		3.08	□□□□□ -1.92
TPM1	YNL079C	YJL218W	P40892	196 aa	Known RBP	3.08	□□□□□ -1.92
TPM1	YNL079C	PFS2	P42841	465 aa	Known RBP	3.08	□□□□□ -1.92
TPM1	YNL079C	SER2	P42941	309 aa		3.08	□□□□□ -1.92
TPM1	YNL079C	YGR210C	P42942	411 aa		3.08	□□□□□ -1.92
TPM1	YNL079C	IBA57	P47158	497 aa		3.08	□□□□□ -1.92
TPM1	YNL079C	YGL101W	P53144	215 aa		3.08	□□□□□ -1.92
TPM1	YNL079C	LSG1	P53145	640 aa	Known RBP	3.08	□□□□□ -1.92
TPM1	YNL079C	MNT4	P53745	580 aa		3.08	□□□□□ -1.92
TPM1	YNL079C	YDR541C	Q03049	344 aa		3.08	□□□□□ -1.92
TPM1	YNL079C	SEC13	Q04491	297 aa	Known RBP	3.08	□□□□□ -1.92
TPM1	YNL079C	YLR173W	Q06247	608 aa		3.08	□□□□□ -1.92
TPM1	YNL079C	RRP9	Q06506	573 aa	Known RBP	3.08	□□□□□ -1.92
TPM1	YNL079C	YPR172W	Q06608	200 aa		3.08	□□□□□ -1.92
TPM1	YNL079C	MRPL35	Q06678	367 aa		3.08	□□□□□ -1.92
TPM1	YNL079C	YPR091C	Q06833	770 aa		3.08	□□□□□ -1.92
TPM1	YNL079C	YDL211C	Q12121	372 aa		3.08	□□□□□ -1.92
TPM1	YNL079C	SPC3	Q12133	184 aa		3.08	□□□□□ -1.92
TPM1	YNL079C	APC2	Q12440	853 aa		3.08	□□□□□ -1.92
TPM1	YNL079C	SLH1	P53327	1967 aa	Known RBP	3.07	□□□□□ -1.92
TPM1	YNL079C	YEL009C-A	A0A023PZF2	135 aa		3.07	□□□□□ -1.92
TPM1	YNL079C	GCN3	P14741	305 aa		3.07	□□□□□ -1.92
TPM1	YNL079C	ERD1	P16151	362 aa		3.07	□□□□□ -1.92
TPM1	YNL079C	PHO80	P20052	293 aa		3.07	□□□□□ -1.92
TPM1	YNL079C	HSP30	P25619	332 aa		3.07	□□□□□ -1.92
TPM1	YNL079C	SPT14	P32363	452 aa		3.07	□□□□□ -1.92
TPM1	YNL079C	YOX1	P34161	385 aa		3.07	□□□□□ -1.92
TPM1	YNL079C	YBR063C	P38083	404 aa		3.07	□□□□□ -1.92
TPM1	YNL079C	SHE1	P38200	338 aa		3.07	□□□□□ -1.92
TPM1	YNL079C	MBA1	P38300	278 aa		3.07	□□□□□ -1.92
TPM1	YNL079C	FMC1	P40491	155 aa		3.07	□□□□□ -1.92
TPM1	YNL079C	GDS1	P41913	522 aa		3.07	□□□□□ -1.92
TPM1	YNL079C	SFH5	P47008	294 aa		3.07	□□□□□ -1.92
TPM1	YNL079C	ARO8	P53090	500 aa	Known RBP	3.07	□□□□□ -1.92
TPM1	YNL079C	MRH4	P53166	561 aa		3.07	□□□□□ -1.92
TPM1	YNL079C	TPC1	P53257	314 aa		3.07	□□□□□ -1.92
TPM1	YNL079C	PGA1	P53896	198 aa		3.07	□□□□□ -1.92
TPM1	YNL079C	ARV1	Q06541	321 aa		3.07	□□□□□ -1.92
TPM1	YNL079C	YLR030W	Q07967	263 aa		3.07	□□□□□ -1.92
TPM1	YNL079C	PEX27	Q08580	376 aa		3.07	□□□□□ -1.92
TPM1	YNL079C	TPT1	Q12272	230 aa	Known RBP	3.07	□□□□□ -1.92
TPM1	YNL079C	PCL9	Q12477	304 aa		3.07	□□□□□ -1.92
TPM1	YNL079C	SUS1	Q6WNK7	96 aa		3.07	□□□□□ -1.92
TPM1	YNL079C	DET1	Q99288	334 aa	Known RBP	3.07	□□□□□ -1.92
TPM1	YNL079C	TRP1	P00912	224 aa		3.06	□□□□□ -1.92
TPM1	YNL079C	CYC3	P06182	269 aa		3.06	□□□□□ -1.92
TPM1	YNL079C	SIR2	P06700	562 aa		3.06	□□□□□ -1.92
TPM1	YNL079C	RPS8A	P0CX39	200 aa	Known RBP	3.06	□□□□□ -1.92
TPM1	YNL079C	RPS8B	P0CX40	200 aa	Known RBP	3.06	□□□□□ -1.92
TPM1	YNL079C	CAP2	P13517	287 aa		3.06	□□□□□ -1.92
TPM1	YNL079C	PRE7	P23724	241 aa	Known RBP	3.06	□□□□□ -1.92
TPM1	YNL079C	PBN1	P25580	416 aa		3.06	□□□□□ -1.92
TPM1	YNL079C	CWP1	P28319	239 aa		3.06	□□□□□ -1.92
TPM1	YNL079C	MNS1	P32906	549 aa		3.06	□□□□□ -1.92
TPM1	YNL079C	ALB1	P47019	175 aa	Predicted RBP	3.06	□□□□□ -1.92
TPM1	YNL079C	MDE1	P47095	244 aa		3.06	□□□□□ -1.92
TPM1	YNL079C	YGL235W	P53071	178 aa		3.06	□□□□□ -1.92
TPM1	YNL079C	RRN9	P53437	365 aa		3.06	□□□□□ -1.92
TPM1	YNL079C	CWC25	P53854	179 aa	Known RBP	3.06	□□□□□ -1.92
TPM1	YNL079C	RHO5	P53879	331 aa	Known RBP	3.06	□□□□□ -1.92
TPM1	YNL079C	STD1	Q02794	444 aa		3.06	□□□□□ -1.92
TPM1	YNL079C	TDA1	Q03533	586 aa		3.06	□□□□□ -1.92
TPM1	YNL079C	INP1	Q03694	420 aa		3.06	□□□□□ -1.92
TPM1	YNL079C	YMR315W	Q04869	349 aa	Known RBP	3.06	□□□□□ -1.92
TPM1	YNL079C	HRI1	Q05905	244 aa	Known RBP	3.06	□□□□□ -1.92
TPM1	YNL079C	GPN3	Q06543	272 aa		3.06	□□□□□ -1.92
TPM1	YNL079C	YPR174C	Q06616	221 aa	Predicted RBP	3.06	□□□□□ -1.92
TPM1	YNL079C	IPK1	Q06667	281 aa		3.06	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 62.2 ms