RNA–Protein interactions for RNA: YMR176W

ECM5, Transcript of Subunit of the Snt2C complex, yeastyeast

Gene ECM5, Length 4,236 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM5YMR176W ATG15P25641 520 aa1.89□□□□□ -2.11
ECM5YMR176W ICL1P28240 557 aaPredicted RBP1.89□□□□□ -2.11
ECM5YMR176W COA1P40452 197 aa1.89□□□□□ -2.11
ECM5YMR176W PHB1P40961 287 aa1.89□□□□□ -2.11
ECM5YMR176W YFL012WP43580 148 aa1.89□□□□□ -2.11
ECM5YMR176W MIC19P43594 170 aa1.89□□□□□ -2.11
ECM5YMR176W MRX5P47007 382 aa1.89□□□□□ -2.11
ECM5YMR176W MPP6P53725 186 aaPredicted RBP1.89□□□□□ -2.11
ECM5YMR176W NNT1Q05874 261 aa1.89□□□□□ -2.11
ECM5YMR176W GMC2Q06201 188 aa1.89□□□□□ -2.11
ECM5YMR176W RIO1Q12196 484 aaKnown RBP1.89□□□□□ -2.11
ECM5YMR176W TFC7Q12415 435 aa1.89□□□□□ -2.11
ECM5YMR176W NOT5Q12514 560 aaPredicted RBP1.89□□□□□ -2.11
ECM5YMR176W SUA5P32579 426 aa1.89□□□□□ -2.11
ECM5YMR176W CDC13P32797 924 aaKnown RBP1.89□□□□□ -2.11
ECM5YMR176W MRPL6P32904 214 aa1.89□□□□□ -2.11
ECM5YMR176W SLX1P38324 304 aa1.89□□□□□ -2.11
ECM5YMR176W PRM9P39551 298 aa1.89□□□□□ -2.11
ECM5YMR176W YPL225WQ08971 146 aaKnown RBP1.89□□□□□ -2.11
ECM5YMR176W YDL012CQ12489 107 aa1.89□□□□□ -2.11
ECM5YMR176W ILV1P00927 576 aaKnown RBP1.88□□□□□ -2.11
ECM5YMR176W RPB4P20433 221 aaPredicted RBP1.88□□□□□ -2.11
ECM5YMR176W ATG12P38316 186 aa1.88□□□□□ -2.11
ECM5YMR176W SPT8P38915 602 aa1.88□□□□□ -2.11
ECM5YMR176W BDH1P39714 382 aa1.88□□□□□ -2.11
ECM5YMR176W LIF1P53150 421 aa1.88□□□□□ -2.11
ECM5YMR176W ABP140Q08641 628 aaKnown RBP1.88□□□□□ -2.11
ECM5YMR176W MSF1P08425 469 aa1.88□□□□□ -2.11
ECM5YMR176W YUH1P35127 236 aa1.88□□□□□ -2.11
ECM5YMR176W YFL064CP43540 174 aa1.88□□□□□ -2.11
ECM5YMR176W EFM5P53200 248 aaKnown RBP1.88□□□□□ -2.11
ECM5YMR176W SMD1Q02260 146 aaPredicted RBP1.88□□□□□ -2.11
ECM5YMR176W TRM44Q02648 567 aaKnown RBP1.88□□□□□ -2.11
ECM5YMR176W CWC21Q03375 135 aaKnown RBP1.88□□□□□ -2.11
ECM5YMR176W YML018CQ03730 393 aa1.88□□□□□ -2.11
ECM5YMR176W KRE28Q04431 385 aa1.88□□□□□ -2.11
ECM5YMR176W CCH1P50077 2039 aa1.88□□□□□ -2.11
ECM5YMR176W RPL24AP04449 155 aaKnown RBP1.88□□□□□ -2.11
ECM5YMR176W FUS3P16892 353 aaKnown RBP1.88□□□□□ -2.11
ECM5YMR176W VPS1P21576 704 aaKnown RBP1.88□□□□□ -2.11
ECM5YMR176W POF1P25576 258 aa1.88□□□□□ -2.11
ECM5YMR176W FRT2P39734 528 aa1.88□□□□□ -2.11
ECM5YMR176W YIA6P40556 373 aa1.88□□□□□ -2.11
ECM5YMR176W GCN20P43535 752 aaKnown RBP1.88□□□□□ -2.11
ECM5YMR176W FLC3P53121 802 aa1.88□□□□□ -2.11
ECM5YMR176W CPD1P53314 239 aa1.88□□□□□ -2.11
ECM5YMR176W TIM11P81449 96 aaPredicted RBP1.88□□□□□ -2.11
ECM5YMR176W SSQ1Q05931 657 aaPredicted RBP1.88□□□□□ -2.11
ECM5YMR176W SIR4P11978 1358 aa1.87□□□□□ -2.11
ECM5YMR176W ECM11Q04110 302 aa1.87□□□□□ -2.11
ECM5YMR176W RPS3P05750 240 aaKnown RBP1.87□□□□□ -2.11
ECM5YMR176W AIM29P36154 155 aa1.87□□□□□ -2.11
ECM5YMR176W MRPL3P36516 390 aa1.87□□□□□ -2.11
ECM5YMR176W SMC2P38989 1170 aaKnown RBP1.87□□□□□ -2.11
ECM5YMR176W YJL118WP47022 219 aa1.87□□□□□ -2.11
ECM5YMR176W HOP2P53187 214 aa1.87□□□□□ -2.11
ECM5YMR176W YPL113CQ02961 396 aa1.87□□□□□ -2.11
ECM5YMR176W YMR209CQ03648 457 aa1.87□□□□□ -2.11
ECM5YMR176W YDL211CQ12121 372 aa1.87□□□□□ -2.11
ECM5YMR176W MET16P18408 261 aaPredicted RBP1.87□□□□□ -2.11
ECM5YMR176W CDC42P19073 191 aa1.87□□□□□ -2.11
ECM5YMR176W CKA2P19454 339 aa1.87□□□□□ -2.11
ECM5YMR176W TDA11P38854 504 aa1.87□□□□□ -2.11
ECM5YMR176W BFR1P38934 470 aaKnown RBP RIP-Chip data1.87□□□□□ -2.11not detected
ECM5YMR176W SER33P40510 469 aa1.87□□□□□ -2.11
ECM5YMR176W NUP84P52891 726 aa1.87□□□□□ -2.11
ECM5YMR176W UFD1P53044 361 aa1.87□□□□□ -2.11
ECM5YMR176W YGL118CP53132 145 aa1.87□□□□□ -2.11
ECM5YMR176W YDL144CQ07589 356 aa1.87□□□□□ -2.11
ECM5YMR176W YKL068W-AQ3E826 78 aa1.87□□□□□ -2.11
ECM5YMR176W ASP1P38986 381 aaPredicted RBP1.86□□□□□ -2.11
ECM5YMR176W YER184CP39961 794 aa1.86□□□□□ -2.11
ECM5YMR176W PEX31P53203 462 aa1.86□□□□□ -2.11
ECM5YMR176W FYV6P53913 173 aa1.86□□□□□ -2.11
ECM5YMR176W SNZ1Q03148 297 aa1.86□□□□□ -2.11
ECM5YMR176W CLP1Q08685 445 aaPredicted RBP1.86□□□□□ -2.11
ECM5YMR176W YPL278CQ08990 100 aa1.86□□□□□ -2.11
ECM5YMR176W NMT1P14743 455 aa1.86□□□□□ -2.11
ECM5YMR176W RPC19P28000 142 aaKnown RBP1.86□□□□□ -2.11
ECM5YMR176W SKG6P32900 734 aaPredicted RBP1.86□□□□□ -2.11
ECM5YMR176W CPR5P35176 225 aa1.86□□□□□ -2.11
ECM5YMR176W TRR2P38816 342 aa1.86□□□□□ -2.11
ECM5YMR176W SDC1Q03323 175 aa1.86□□□□□ -2.11
ECM5YMR176W SFH1Q06168 426 aa1.86□□□□□ -2.11
ECM5YMR176W PDR18P53756 1333 aa1.86□□□□□ -2.11
ECM5YMR176W KSS1P14681 368 aa1.86□□□□□ -2.11
ECM5YMR176W RRT12P25381 491 aa1.86□□□□□ -2.11
ECM5YMR176W SRL3P36167 246 aa1.86□□□□□ -2.11
ECM5YMR176W FES1P38260 290 aa1.86□□□□□ -2.11
ECM5YMR176W YBR242WP38331 238 aa1.86□□□□□ -2.11
ECM5YMR176W EDC2P40023 145 aaPredicted RBP1.86□□□□□ -2.11
ECM5YMR176W AVT7P40501 490 aa1.86□□□□□ -2.11
ECM5YMR176W YIL001WP40560 513 aa1.86□□□□□ -2.11
ECM5YMR176W HYR1P40581 163 aaKnown RBP1.86□□□□□ -2.11
ECM5YMR176W NBP35P52920 328 aa1.86□□□□□ -2.11
ECM5YMR176W HST4P53688 370 aa1.86□□□□□ -2.11
ECM5YMR176W MNT4P53745 580 aa1.86□□□□□ -2.11
ECM5YMR176W RRN5Q02983 363 aa1.86□□□□□ -2.11
ECM5YMR176W PLP1Q04004 230 aa1.86□□□□□ -2.11
ECM5YMR176W TAF9Q05027 157 aa1.86□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 43 ms