RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W ATG15P25641 520 aa1.59□□□□□ -2.15
SMD1YGR074W PPA2P28239 310 aa1.59□□□□□ -2.15
SMD1YGR074W FMT1P32785 401 aa1.59□□□□□ -2.15
SMD1YGR074W SPL2P38839 148 aa1.59□□□□□ -2.15
SMD1YGR074W YER085CP40058 173 aa1.59□□□□□ -2.15
SMD1YGR074W HSH155P49955 971 aaKnown RBP1.59□□□□□ -2.15
SMD1YGR074W NBP1P52919 319 aaPredicted RBP1.59□□□□□ -2.15
SMD1YGR074W UFD1P53044 361 aa1.59□□□□□ -2.15
SMD1YGR074W SDC1Q03323 175 aa1.59□□□□□ -2.15
SMD1YGR074W MYO5Q04439 1219 aaKnown RBP1.59□□□□□ -2.15
SMD1YGR074W YDR114CQ04597 100 aa1.59□□□□□ -2.15
SMD1YGR074W YLR283WQ05867 314 aa1.59□□□□□ -2.15
SMD1YGR074W YPR147CQ06522 304 aaKnown RBP1.59□□□□□ -2.15
SMD1YGR074W IES4Q08561 116 aa1.59□□□□□ -2.15
SMD1YGR074W YPL264CQ08980 353 aa1.59□□□□□ -2.15
SMD1YGR074W RFM1Q12192 310 aa1.59□□□□□ -2.15
SMD1YGR074W PST1Q12355 444 aa1.59□□□□□ -2.15
SMD1YGR074W SNF8Q12483 233 aa1.59□□□□□ -2.15
SMD1YGR074W ISD11Q6Q560 94 aa1.59□□□□□ -2.15
SMD1YGR074W MRPL25P23369 157 aa1.58□□□□□ -2.16
SMD1YGR074W HOM6P31116 359 aaKnown RBP1.58□□□□□ -2.16
SMD1YGR074W TKL2P33315 681 aa1.58□□□□□ -2.16
SMD1YGR074W CSG2P35206 410 aa1.58□□□□□ -2.16
SMD1YGR074W HMT1P38074 348 aa1.58□□□□□ -2.16
SMD1YGR074W LDB7P38210 180 aa1.58□□□□□ -2.16
SMD1YGR074W TRM7P38238 310 aaKnown RBP1.58□□□□□ -2.16
SMD1YGR074W CUE1P38428 203 aa1.58□□□□□ -2.16
SMD1YGR074W SMB1P40018 196 aaKnown RBP1.58□□□□□ -2.16
SMD1YGR074W RTR1P40084 226 aaPredicted RBP1.58□□□□□ -2.16
SMD1YGR074W COX15P40086 486 aa1.58□□□□□ -2.16
SMD1YGR074W GCN20P43535 752 aaKnown RBP1.58□□□□□ -2.16
SMD1YGR074W NBP35P52920 328 aa1.58□□□□□ -2.16
SMD1YGR074W MIG2P53035 382 aa1.58□□□□□ -2.16
SMD1YGR074W ZRG17P53735 605 aa1.58□□□□□ -2.16
SMD1YGR074W ALG9P53868 555 aaKnown RBP1.58□□□□□ -2.16
SMD1YGR074W AAH1P53909 347 aa1.58□□□□□ -2.16
SMD1YGR074W CDC14Q00684 551 aa1.58□□□□□ -2.16
SMD1YGR074W YDR124WQ04608 324 aa1.58□□□□□ -2.16
SMD1YGR074W PLB3Q08108 686 aa1.58□□□□□ -2.16
SMD1YGR074W YCT1Q12235 531 aa1.58□□□□□ -2.16
SMD1YGR074W YPS3Q12303 508 aa1.58□□□□□ -2.16
SMD1YGR074W MRX4Q12467 430 aa1.58□□□□□ -2.16
SMD1YGR074W YBL008W-AQ3E821 79 aa1.58□□□□□ -2.16
SMD1YGR074W PAN1P32521 1480 aa1.57□□□□□ -2.16
SMD1YGR074W TDH2P00358 332 aaKnown RBP1.57□□□□□ -2.16
SMD1YGR074W YKR104WP0CE69 306 aa1.57□□□□□ -2.16
SMD1YGR074W PRE7P23724 241 aaKnown RBP1.57□□□□□ -2.16
SMD1YGR074W SSO1P32867 290 aa1.57□□□□□ -2.16
SMD1YGR074W SFC1P33303 322 aa1.57□□□□□ -2.16
SMD1YGR074W MAL32P38158 584 aa1.57□□□□□ -2.16
SMD1YGR074W YBL081WP38180 368 aaKnown RBP1.57□□□□□ -2.16
SMD1YGR074W YHL049CP38722 271 aa1.57□□□□□ -2.16
SMD1YGR074W ARN2P38724 620 aa1.57□□□□□ -2.16
SMD1YGR074W YHR127WP38833 243 aaKnown RBP1.57□□□□□ -2.16
SMD1YGR074W ECM14P38836 430 aa1.57□□□□□ -2.16
SMD1YGR074W BFR1P38934 470 aaKnown RBP RIP-Chip data1.57□□□□□ -2.16not detected
SMD1YGR074W SUR2P38992 349 aa1.57□□□□□ -2.16
SMD1YGR074W YFR045WP43617 309 aa1.57□□□□□ -2.16
SMD1YGR074W GLG2P47011 380 aa1.57□□□□□ -2.16
SMD1YGR074W CGR1P53188 120 aa1.57□□□□□ -2.16
SMD1YGR074W MAL12P53341 584 aa1.57□□□□□ -2.16
SMD1YGR074W OSH6Q02201 448 aa1.57□□□□□ -2.16
SMD1YGR074W GOT1Q03554 138 aa1.57□□□□□ -2.16
SMD1YGR074W RRP40Q08285 240 aaKnown RBP1.57□□□□□ -2.16
SMD1YGR074W SGT2Q12118 346 aaKnown RBP1.57□□□□□ -2.16
SMD1YGR074W PRR2Q12310 699 aa1.57□□□□□ -2.16
SMD1YGR074W ATG5Q12380 294 aa1.57□□□□□ -2.16
SMD1YGR074W FAB1P34756 2278 aa1.57□□□□□ -2.16
SMD1YGR074W NHP6BP11633 99 aaKnown RBP1.56□□□□□ -2.16
SMD1YGR074W TCP1P12612 559 aaKnown RBP1.56□□□□□ -2.16
SMD1YGR074W RNP1P32385 249 aa1.56□□□□□ -2.16
SMD1YGR074W DRE2P36152 348 aa1.56□□□□□ -2.16
SMD1YGR074W TEM1P38987 245 aa1.56□□□□□ -2.16
SMD1YGR074W YHB1P39676 399 aaKnown RBP1.56□□□□□ -2.16
SMD1YGR074W YMR144WP40214 342 aaKnown RBP1.56□□□□□ -2.16
SMD1YGR074W PFS2P42841 465 aaKnown RBP1.56□□□□□ -2.16
SMD1YGR074W COS4P43542 379 aa1.56□□□□□ -2.16
SMD1YGR074W SNZ3P43545 298 aa1.56□□□□□ -2.16
SMD1YGR074W YJR079WP47126 109 aa1.56□□□□□ -2.16
SMD1YGR074W NOP13P53883 403 aaKnown RBP RIP-Chip data1.56□□□□□ -2.16not detected
SMD1YGR074W SPG4Q04438 115 aa1.56□□□□□ -2.16
SMD1YGR074W YPR195CQ06594 109 aa1.56□□□□□ -2.16
SMD1YGR074W YOL019WQ08157 551 aa1.56□□□□□ -2.16
SMD1YGR074W SMT3Q12306 101 aaKnown RBP1.56□□□□□ -2.16
SMD1YGR074W TIM22Q12328 207 aa1.56□□□□□ -2.16
SMD1YGR074W YPR096CO13587 100 aa1.55□□□□□ -2.16
SMD1YGR074W MATALPHA1P0CY06 175 aa1.55□□□□□ -2.16
SMD1YGR074W HMLALPHA1P0CY07 175 aa1.55□□□□□ -2.16
SMD1YGR074W RPB4P20433 221 aaPredicted RBP1.55□□□□□ -2.16
SMD1YGR074W DPB2P24482 689 aaPredicted RBP1.55□□□□□ -2.16
SMD1YGR074W VMA6P32366 345 aaKnown RBP1.55□□□□□ -2.16
SMD1YGR074W CAB3P36076 571 aa1.55□□□□□ -2.16
SMD1YGR074W PRE6P40303 254 aaKnown RBP1.55□□□□□ -2.16
SMD1YGR074W OTU1P43558 301 aa1.55□□□□□ -2.16
SMD1YGR074W HOC1P47124 396 aa1.55□□□□□ -2.16
SMD1YGR074W SNZ2P53824 298 aa1.55□□□□□ -2.16
SMD1YGR074W PGA2P53903 129 aa1.55□□□□□ -2.16
SMD1YGR074W APJ1P53940 528 aa1.55□□□□□ -2.16
SMD1YGR074W TIM11P81449 96 aaPredicted RBP1.55□□□□□ -2.16
SMD1YGR074W GTO3Q04806 366 aa1.55□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 110 ms