RNA–Protein interactions for RNA: YGL155W

CDC43, Transcript of Beta subunit of geranylgeranyltransferase type I, yeast

Gene CDC43, Length 1,131 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC43	YGL155W	SRX1	P36077	127 aa		4.84	□□□□□ -1.63
CDC43	YGL155W	PAN3	P36102	679 aa	Predicted RBP	4.84	□□□□□ -1.63
CDC43	YGL155W	FLO10	P36170	1169 aa		4.84	□□□□□ -1.63
CDC43	YGL155W	MRPL27	P36526	146 aa	Predicted RBP	4.84	□□□□□ -1.63
CDC43	YGL155W	PFS1	P38872	237 aa		4.84	□□□□□ -1.63
CDC43	YGL155W	ASP1	P38986	381 aa	Predicted RBP	4.84	□□□□□ -1.63
CDC43	YGL155W	PZF1	P39933	429 aa		4.84	□□□□□ -1.63
CDC43	YGL155W	DLS1	P40366	167 aa		4.84	□□□□□ -1.63
CDC43	YGL155W	CIN2	P46670	268 aa		4.84	□□□□□ -1.63
CDC43	YGL155W	GPI14	P47088	403 aa	Known RBP	4.84	□□□□□ -1.63
CDC43	YGL155W	FMP48	P53233	369 aa		4.84	□□□□□ -1.63
CDC43	YGL155W	CAF40	P53829	373 aa		4.84	□□□□□ -1.63
CDC43	YGL155W	SWS2	P53937	143 aa		4.84	□□□□□ -1.63
CDC43	YGL155W	ERG13	P54839	491 aa	Known RBP	4.84	□□□□□ -1.63
CDC43	YGL155W	PEX25	Q02969	394 aa		4.84	□□□□□ -1.63
CDC43	YGL155W	HNT1	Q04344	158 aa	Known RBP	4.84	□□□□□ -1.63
CDC43	YGL155W	VBA4	Q04602	768 aa	Known RBP	4.84	□□□□□ -1.63
CDC43	YGL155W	YPR174C	Q06616	221 aa	Predicted RBP	4.84	□□□□□ -1.63
CDC43	YGL155W	HRT1	Q08273	121 aa		4.84	□□□□□ -1.63
CDC43	YGL155W	BSC6	Q08280	497 aa		4.84	□□□□□ -1.63
CDC43	YGL155W	ENB1	Q08299	606 aa		4.84	□□□□□ -1.63
CDC43	YGL155W	HNT3	Q08702	217 aa		4.84	□□□□□ -1.63
CDC43	YGL155W	RDR1	Q08904	546 aa		4.84	□□□□□ -1.63
CDC43	YGL155W	SRL2	Q12020	392 aa		4.84	□□□□□ -1.63
CDC43	YGL155W	REX3	Q12090	404 aa		4.84	□□□□□ -1.63
CDC43	YGL155W	RLM1	Q12224	676 aa		4.84	□□□□□ -1.63
CDC43	YGL155W	ODC2	Q99297	307 aa		4.84	□□□□□ -1.63
CDC43	YGL155W	TDH1	P00360	332 aa	Known RBP	4.83	□□□□□ -1.64
CDC43	YGL155W	IPP1	P00817	287 aa	Known RBP	4.83	□□□□□ -1.64
CDC43	YGL155W	ZRC1	P20107	442 aa		4.83	□□□□□ -1.64
CDC43	YGL155W	IFM1	P25038	676 aa		4.83	□□□□□ -1.64
CDC43	YGL155W	PET18	P25362	215 aa		4.83	□□□□□ -1.64
CDC43	YGL155W	EMP24	P32803	203 aa	Known RBP	4.83	□□□□□ -1.64
CDC43	YGL155W	PPZ2	P33329	710 aa		4.83	□□□□□ -1.64
CDC43	YGL155W	ALG3	P38179	458 aa		4.83	□□□□□ -1.64
CDC43	YGL155W	SSH1	P38353	490 aa	Known RBP	4.83	□□□□□ -1.64
CDC43	YGL155W	YHR180W	P38868	163 aa		4.83	□□□□□ -1.64
CDC43	YGL155W	YJL193W	P39542	402 aa		4.83	□□□□□ -1.64
CDC43	YGL155W	YIL060W	P40519	144 aa		4.83	□□□□□ -1.64
CDC43	YGL155W	SHR5	P41912	237 aa		4.83	□□□□□ -1.64
CDC43	YGL155W	OTU1	P43558	301 aa		4.83	□□□□□ -1.64
CDC43	YGL155W	YJR141W	P47172	347 aa	Predicted RBP	4.83	□□□□□ -1.64
CDC43	YGL155W	SNN1	P48232	102 aa		4.83	□□□□□ -1.64
CDC43	YGL155W	MNN10	P50108	393 aa	Known RBP	4.83	□□□□□ -1.64
CDC43	YGL155W	PHO23	P50947	330 aa		4.83	□□□□□ -1.64
CDC43	YGL155W	SNP1	Q00916	300 aa	Predicted RBP	4.83	□□□□□ -1.64
CDC43	YGL155W	EKI1	Q03764	534 aa		4.83	□□□□□ -1.64
CDC43	YGL155W	BNA7	Q04066	261 aa		4.83	□□□□□ -1.64
CDC43	YGL155W	CAC2	Q04199	468 aa		4.83	□□□□□ -1.64
CDC43	YGL155W	NNT1	Q05874	261 aa		4.83	□□□□□ -1.64
CDC43	YGL155W	YOL073C	Q08232	322 aa		4.83	□□□□□ -1.64
CDC43	YGL155W	FCF2	Q12035	217 aa	Predicted RBP	4.83	□□□□□ -1.64
CDC43	YGL155W	RTK1	Q12100	620 aa	Predicted RBP	4.83	□□□□□ -1.64
CDC43	YGL155W	EAF3	Q12432	401 aa		4.83	□□□□□ -1.64
CDC43	YGL155W	ISN1	Q99312	450 aa		4.83	□□□□□ -1.64
CDC43	YGL155W	CCH1	P50077	2039 aa		4.83	□□□□□ -1.64
CDC43	YGL155W	YSF3	P0C074	85 aa	Predicted RBP	4.82	□□□□□ -1.64
CDC43	YGL155W	CTA1	P15202	515 aa		4.82	□□□□□ -1.64
CDC43	YGL155W	AIM17	P23180	465 aa	Known RBP	4.82	□□□□□ -1.64
CDC43	YGL155W	CPR2	P23285	205 aa		4.82	□□□□□ -1.64
CDC43	YGL155W	SRY1	P36007	326 aa		4.82	□□□□□ -1.64
CDC43	YGL155W	SHG1	P38337	142 aa		4.82	□□□□□ -1.64
CDC43	YGL155W	LAG1	P38703	411 aa		4.82	□□□□□ -1.64
CDC43	YGL155W	SLZ1	P40167	298 aa		4.82	□□□□□ -1.64
CDC43	YGL155W	RPL13B	P40212	199 aa	Known RBP	4.82	□□□□□ -1.64
CDC43	YGL155W	BUL1	P48524	976 aa		4.82	□□□□□ -1.64
CDC43	YGL155W	BXI1	P48558	297 aa		4.82	□□□□□ -1.64
CDC43	YGL155W	YGL159W	P53110	370 aa		4.82	□□□□□ -1.64
CDC43	YGL155W	RMD9	P53140	646 aa	Known RBP	4.82	□□□□□ -1.64
CDC43	YGL155W	TYW3	P53177	273 aa		4.82	□□□□□ -1.64
CDC43	YGL155W	RHO5	P53879	331 aa	Known RBP	4.82	□□□□□ -1.64
CDC43	YGL155W	INN1	P53901	409 aa		4.82	□□□□□ -1.64
CDC43	YGL155W	ODC1	Q03028	310 aa		4.82	□□□□□ -1.64
CDC43	YGL155W	SNX41	Q04053	625 aa		4.82	□□□□□ -1.64
CDC43	YGL155W	IRC19	Q07843	230 aa		4.82	□□□□□ -1.64
CDC43	YGL155W	YLR030W	Q07967	263 aa		4.82	□□□□□ -1.64
CDC43	YGL155W	TGS1	Q12052	315 aa		4.82	□□□□□ -1.64
CDC43	YGL155W	SNU23	Q12368	194 aa	Predicted RBP	4.82	□□□□□ -1.64
CDC43	YGL155W	TFC7	Q12415	435 aa		4.82	□□□□□ -1.64
CDC43	YGL155W	RPL13A	Q12690	199 aa	Predicted RBP	4.82	□□□□□ -1.64
CDC43	YGL155W	PET20	Q99373	253 aa		4.82	□□□□□ -1.64
CDC43	YGL155W	YLR358C	O13565	187 aa		4.81	□□□□□ -1.64
CDC43	YGL155W	OPI3	P05375	206 aa		4.81	□□□□□ -1.64
CDC43	YGL155W	NAM2	P11325	894 aa		4.81	□□□□□ -1.64
CDC43	YGL155W	HEM13	P11353	328 aa	Known RBP	4.81	□□□□□ -1.64
CDC43	YGL155W	HNM1	P19807	563 aa		4.81	□□□□□ -1.64
CDC43	YGL155W	MEK1	P24719	497 aa	Predicted RBP	4.81	□□□□□ -1.64
CDC43	YGL155W	KRR1	P25586	316 aa	Predicted RBP	4.81	□□□□□ -1.64
CDC43	YGL155W	IMG1	P25626	169 aa		4.81	□□□□□ -1.64
CDC43	YGL155W	RFA3	P26755	122 aa	Known RBP	4.81	□□□□□ -1.64
CDC43	YGL155W	TRR1	P29509	319 aa	Known RBP	4.81	□□□□□ -1.64
CDC43	YGL155W	RPD3	P32561	433 aa		4.81	□□□□□ -1.64
CDC43	YGL155W	RPS27A	P35997	82 aa	Known RBP	4.81	□□□□□ -1.64
CDC43	YGL155W	APD1	P38281	316 aa		4.81	□□□□□ -1.64
CDC43	YGL155W	RPS27B	P38711	82 aa		4.81	□□□□□ -1.64
CDC43	YGL155W	LNP1	P38878	278 aa		4.81	□□□□□ -1.64
CDC43	YGL155W	YJR111C	P47148	283 aa	Known RBP	4.81	□□□□□ -1.64
CDC43	YGL155W	MCM22	P47167	239 aa		4.81	□□□□□ -1.64
CDC43	YGL155W	SEH1	P53011	349 aa	Known RBP	4.81	□□□□□ -1.64
CDC43	YGL155W	PNC1	P53184	216 aa	Known RBP	4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 37.9 ms