RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C RSA1Q08932 381 aa1.04□□□□□ -2.24
SWI4YER111C YRA1Q12159 226 aaKnown RBP1.04□□□□□ -2.24
SWI4YER111C YOR114WQ12219 294 aa1.04□□□□□ -2.24
SWI4YER111C COQ1P18900 473 aa1.03□□□□□ -2.24
SWI4YER111C CAM1P29547 415 aaKnown RBP1.03□□□□□ -2.24
SWI4YER111C TPS2P31688 896 aaKnown RBP1.03□□□□□ -2.24
SWI4YER111C ATG12P38316 186 aa1.03□□□□□ -2.24
SWI4YER111C MIC12P38341 106 aa1.03□□□□□ -2.24
SWI4YER111C RCK1P38622 512 aa1.03□□□□□ -2.24
SWI4YER111C SHC1P39000 512 aa1.03□□□□□ -2.24
SWI4YER111C PRP24P49960 444 aaKnown RBP1.03□□□□□ -2.24
SWI4YER111C CAX4P53223 239 aa1.03□□□□□ -2.24
SWI4YER111C NOP13P53883 403 aaKnown RBP RIP-Chip data1.03□□□□□ -2.24not detected
SWI4YER111C CDC14Q00684 551 aa1.03□□□□□ -2.24
SWI4YER111C FAR10Q06001 478 aa1.03□□□□□ -2.24
SWI4YER111C SEC10Q06245 871 aa1.03□□□□□ -2.24
SWI4YER111C YOR292CQ08743 309 aa1.03□□□□□ -2.24
SWI4YER111C SNU23Q12368 194 aaPredicted RBP1.03□□□□□ -2.24
SWI4YER111C COX4P04037 155 aa1.03□□□□□ -2.24
SWI4YER111C MRPL25P23369 157 aa1.03□□□□□ -2.24
SWI4YER111C PCL1P24867 279 aa1.03□□□□□ -2.24
SWI4YER111C SPS19P32573 292 aaKnown RBP1.03□□□□□ -2.24
SWI4YER111C ZRT3P34240 503 aa1.03□□□□□ -2.24
SWI4YER111C JEN1P36035 616 aa1.03□□□□□ -2.24
SWI4YER111C UTH1P36135 365 aa1.03□□□□□ -2.24
SWI4YER111C PHO89P38361 574 aa1.03□□□□□ -2.24
SWI4YER111C ECM34P38728 170 aa1.03□□□□□ -2.24
SWI4YER111C THO1P40040 218 aaKnown RBP1.03□□□□□ -2.24
SWI4YER111C TIS11P47977 285 aa1.03□□□□□ -2.24
SWI4YER111C MAL13P53338 473 aa1.03□□□□□ -2.24
SWI4YER111C MNT4P53745 580 aa1.03□□□□□ -2.24
SWI4YER111C PGA2P53903 129 aa1.03□□□□□ -2.24
SWI4YER111C HAL1Q01766 294 aa1.03□□□□□ -2.24
SWI4YER111C RMI1Q02685 241 aa1.03□□□□□ -2.24
SWI4YER111C VPS60Q03390 229 aa1.03□□□□□ -2.24
SWI4YER111C TMC1Q08422 150 aaPredicted RBP1.03□□□□□ -2.24
SWI4YER111C FDH1Q08911 376 aa1.03□□□□□ -2.24
SWI4YER111C ATG31Q12421 196 aa1.03□□□□□ -2.24
SWI4YER111C STH1P32597 1359 aa1.03□□□□□ -2.25
SWI4YER111C SKI3P17883 1432 aaKnown RBP1.02□□□□□ -2.25
SWI4YER111C PET494P07390 489 aaPredicted RBP1.02□□□□□ -2.25
SWI4YER111C MER1P16523 270 aa1.02□□□□□ -2.25
SWI4YER111C ALK2P32789 676 aaPredicted RBP1.02□□□□□ -2.25
SWI4YER111C GPX1P36014 167 aa1.02□□□□□ -2.25
SWI4YER111C CBT1P36038 271 aaPredicted RBP1.02□□□□□ -2.25
SWI4YER111C FRM2P37261 193 aa1.02□□□□□ -2.25
SWI4YER111C SMP1P38128 452 aa1.02□□□□□ -2.25
SWI4YER111C HEK2P38199 381 aaKnown RBP RIP-Chip data1.02□□□□□ -2.25 RIP-Chip
SWI4YER111C SHE1P38200 338 aa1.02□□□□□ -2.25
SWI4YER111C SIP3P38717 1229 aa1.02□□□□□ -2.25
SWI4YER111C YER184CP39961 794 aa1.02□□□□□ -2.25
SWI4YER111C YIL054WP40524 105 aa1.02□□□□□ -2.25
SWI4YER111C USE1P53146 245 aa1.02□□□□□ -2.25
SWI4YER111C RNY1Q02933 434 aaKnown RBP1.02□□□□□ -2.25
SWI4YER111C YPL113CQ02961 396 aa1.02□□□□□ -2.25
SWI4YER111C YTH1Q06102 208 aaPredicted RBP1.02□□□□□ -2.25
SWI4YER111C RPN8Q08723 338 aaKnown RBP1.02□□□□□ -2.25
SWI4YER111C RAX2Q12465 1220 aa1.02□□□□□ -2.25
SWI4YER111C AI5_BETAQ9ZZX0 354 aa1.02□□□□□ -2.25
SWI4YER111C THP2O13539 261 aaKnown RBP1.02□□□□□ -2.25
SWI4YER111C RPL28P02406 149 aaKnown RBP1.02□□□□□ -2.25
SWI4YER111C RHO1P06780 209 aaKnown RBP1.02□□□□□ -2.25
SWI4YER111C POX1P13711 748 aa1.02□□□□□ -2.25
SWI4YER111C CBF1P17106 351 aa1.02□□□□□ -2.25
SWI4YER111C DAL81P21657 970 aa1.02□□□□□ -2.25
SWI4YER111C AIM29P36154 155 aa1.02□□□□□ -2.25
SWI4YER111C VAB2P40003 282 aa1.02□□□□□ -2.25
SWI4YER111C RPE1P46969 238 aa1.02□□□□□ -2.25
SWI4YER111C SDS23P53172 527 aa1.02□□□□□ -2.25
SWI4YER111C YNL040WP53960 456 aaPredicted RBP1.02□□□□□ -2.25
SWI4YER111C SRL4Q03085 281 aa1.02□□□□□ -2.25
SWI4YER111C SCS7Q03529 384 aa1.02□□□□□ -2.25
SWI4YER111C HKR1P41809 1802 aa1.02□□□□□ -2.25
SWI4YER111C STE18P18852 110 aa1.02□□□□□ -2.25
SWI4YER111C ZIP1P31111 875 aa1.02□□□□□ -2.25
SWI4YER111C YKL187CP34231 750 aa1.02□□□□□ -2.25
SWI4YER111C CUE1P38428 203 aa1.02□□□□□ -2.25
SWI4YER111C COX15P40086 486 aa1.02□□□□□ -2.25
SWI4YER111C GCN20P43535 752 aaKnown RBP1.02□□□□□ -2.25
SWI4YER111C YAR1P46683 200 aa1.02□□□□□ -2.25
SWI4YER111C TPN1P53099 579 aa1.02□□□□□ -2.25
SWI4YER111C YGR018CP53211 109 aa1.02□□□□□ -2.25
SWI4YER111C SWT21P53873 357 aaPredicted RBP1.02□□□□□ -2.25
SWI4YER111C TPS1Q00764 495 aaKnown RBP1.02□□□□□ -2.25
SWI4YER111C SEC13Q04491 297 aaKnown RBP1.02□□□□□ -2.25
SWI4YER111C NNT1Q05874 261 aa1.02□□□□□ -2.25
SWI4YER111C YPR098CQ06089 161 aa1.02□□□□□ -2.25
SWI4YER111C YPR147CQ06522 304 aaKnown RBP1.02□□□□□ -2.25
SWI4YER111C RLP24Q07915 199 aaKnown RBP1.02□□□□□ -2.25
SWI4YER111C ADF1Q2V2Q1 113 aa1.02□□□□□ -2.25
SWI4YER111C YOS9Q99220 542 aa1.02□□□□□ -2.25
SWI4YER111C AEP1P32493 518 aa1.01□□□□□ -2.25
SWI4YER111C CAT2P32796 670 aaKnown RBP1.01□□□□□ -2.25
SWI4YER111C MRPL3P36516 390 aa1.01□□□□□ -2.25
SWI4YER111C MRPL39P36533 70 aa1.01□□□□□ -2.25
SWI4YER111C EFM1P38732 585 aa1.01□□□□□ -2.25
SWI4YER111C EDC2P40023 145 aaPredicted RBP1.01□□□□□ -2.25
SWI4YER111C MSS2P40990 351 aa1.01□□□□□ -2.25
SWI4YER111C YFL064CP43540 174 aa1.01□□□□□ -2.25
SWI4YER111C OTU1P43558 301 aa1.01□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms