RNA–Protein interactions for RNA: YEL048C

TCA17, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TCA17, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCA17YEL048C YNL095CP53932 642 aa2.53□□□□□ -2
TCA17YEL048C OSH6Q02201 448 aa2.53□□□□□ -2
TCA17YEL048C YDR209CQ03480 137 aa2.53□□□□□ -2
TCA17YEL048C NNT1Q05874 261 aa2.53□□□□□ -2
TCA17YEL048C YAL063C-AQ3E791 96 aa2.53□□□□□ -2
TCA17YEL048C RPL4AP10664 362 aaKnown RBP2.52□□□□□ -2.01
TCA17YEL048C PHO80P20052 293 aa2.52□□□□□ -2.01
TCA17YEL048C YCR016WP25617 290 aaKnown RBP2.52□□□□□ -2.01
TCA17YEL048C MED6P38782 295 aa2.52□□□□□ -2.01
TCA17YEL048C SEN34P39707 275 aa2.52□□□□□ -2.01
TCA17YEL048C SYS1P41544 203 aa2.52□□□□□ -2.01
TCA17YEL048C RPL4BP49626 362 aaKnown RBP2.52□□□□□ -2.01
TCA17YEL048C MIG2P53035 382 aa2.52□□□□□ -2.01
TCA17YEL048C MAL13P53338 473 aa2.52□□□□□ -2.01
TCA17YEL048C ARV1Q06541 321 aa2.52□□□□□ -2.01
TCA17YEL048C TY3A-GQ12173 290 aa2.52□□□□□ -2.01
TCA17YEL048C MSH5Q12175 901 aa2.52□□□□□ -2.01
TCA17YEL048C TY3A-IQ99219 290 aa2.52□□□□□ -2.01
TCA17YEL048C RPP0P05317 312 aaKnown RBP2.51□□□□□ -2.01
TCA17YEL048C CAT2P32796 670 aaKnown RBP2.51□□□□□ -2.01
TCA17YEL048C SKI2P35207 1287 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
TCA17YEL048C YBR062CP38239 180 aa2.51□□□□□ -2.01
TCA17YEL048C FZO1P38297 855 aa2.51□□□□□ -2.01
TCA17YEL048C BFR1P38934 470 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
TCA17YEL048C NBP35P52920 328 aa2.51□□□□□ -2.01
TCA17YEL048C SLX9P53251 210 aaPredicted RBP2.51□□□□□ -2.01
TCA17YEL048C ALG9P53868 555 aaKnown RBP2.51□□□□□ -2.01
TCA17YEL048C SWS2P53937 143 aa2.51□□□□□ -2.01
TCA17YEL048C SDC1Q03323 175 aa2.51□□□□□ -2.01
TCA17YEL048C PRR2Q12310 699 aa2.51□□□□□ -2.01
TCA17YEL048C AI5_BETAQ9ZZX0 354 aa2.51□□□□□ -2.01
TCA17YEL048C MSN4P33749 630 aa2.5□□□□□ -2.01
TCA17YEL048C PHO89P38361 574 aa2.5□□□□□ -2.01
TCA17YEL048C AVT7P40501 490 aa2.5□□□□□ -2.01
TCA17YEL048C MNN5P46982 586 aa2.5□□□□□ -2.01
TCA17YEL048C CDC14Q00684 551 aa2.5□□□□□ -2.01
TCA17YEL048C MRS2Q01926 470 aa2.5□□□□□ -2.01
TCA17YEL048C ATG17Q06410 417 aa2.5□□□□□ -2.01
TCA17YEL048C YOR029WQ12243 111 aa2.5□□□□□ -2.01
TCA17YEL048C ATG15P25641 520 aa2.49□□□□□ -2.01
TCA17YEL048C HOM6P31116 359 aaKnown RBP2.49□□□□□ -2.01
TCA17YEL048C QRI5P32344 111 aa2.49□□□□□ -2.01
TCA17YEL048C ERG2P32352 222 aa2.49□□□□□ -2.01
TCA17YEL048C BMH2P34730 273 aaKnown RBP2.49□□□□□ -2.01
TCA17YEL048C POP8P38208 133 aa2.49□□□□□ -2.01
TCA17YEL048C SER33P40510 469 aa2.49□□□□□ -2.01
TCA17YEL048C USE1P53146 245 aa2.49□□□□□ -2.01
TCA17YEL048C ASI3P53983 676 aa2.49□□□□□ -2.01
TCA17YEL048C EBS1Q03466 884 aaKnown RBP2.49□□□□□ -2.01
TCA17YEL048C SNU23Q12368 194 aaPredicted RBP2.49□□□□□ -2.01
TCA17YEL048C POX1P13711 748 aa2.48□□□□□ -2.01
TCA17YEL048C RPB4P20433 221 aaPredicted RBP2.48□□□□□ -2.01
TCA17YEL048C RPL24BP24000 155 aaKnown RBP2.48□□□□□ -2.01
TCA17YEL048C YCR025CP25352 136 aa2.48□□□□□ -2.01
TCA17YEL048C SMB1P40018 196 aaKnown RBP2.48□□□□□ -2.01
TCA17YEL048C THO1P40040 218 aaKnown RBP2.48□□□□□ -2.01
TCA17YEL048C RTR1P40084 226 aaPredicted RBP2.48□□□□□ -2.01
TCA17YEL048C OTU1P43558 301 aa2.48□□□□□ -2.01
TCA17YEL048C AAH1P53909 347 aa2.48□□□□□ -2.01
TCA17YEL048C TVP15Q03860 143 aa2.48□□□□□ -2.01
TCA17YEL048C PEX10Q05568 337 aa2.48□□□□□ -2.01
TCA17YEL048C YCT1Q12235 531 aa2.48□□□□□ -2.01
TCA17YEL048C YPL119C-AQ3E751 87 aa2.48□□□□□ -2.01
TCA17YEL048C MRPL25P23369 157 aa2.47□□□□□ -2.01
TCA17YEL048C TRM7P38238 310 aaKnown RBP2.47□□□□□ -2.01
TCA17YEL048C MSS2P40990 351 aa2.47□□□□□ -2.01
TCA17YEL048C RPE1P46969 238 aa2.47□□□□□ -2.01
TCA17YEL048C GLG2P47011 380 aa2.47□□□□□ -2.01
TCA17YEL048C SWT21P53873 357 aaPredicted RBP2.47□□□□□ -2.01
TCA17YEL048C YPR098CQ06089 161 aa2.47□□□□□ -2.01
TCA17YEL048C SPO77Q06134 477 aa2.47□□□□□ -2.01
TCA17YEL048C LOA1Q06508 300 aa2.47□□□□□ -2.01
TCA17YEL048C NCB2Q92317 146 aa2.47□□□□□ -2.01
TCA17YEL048C RPO26P20435 155 aa2.46□□□□□ -2.02
TCA17YEL048C RPS5P26783 225 aaKnown RBP2.46□□□□□ -2.02
TCA17YEL048C BMH1P29311 267 aaKnown RBP2.46□□□□□ -2.02
TCA17YEL048C JEN1P36035 616 aa2.46□□□□□ -2.02
TCA17YEL048C HMT1P38074 348 aa2.46□□□□□ -2.02
TCA17YEL048C HEK2P38199 381 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
TCA17YEL048C LDB7P38210 180 aa2.46□□□□□ -2.02
TCA17YEL048C YRB1P41920 201 aaKnown RBP2.46□□□□□ -2.02
TCA17YEL048C HOC1P47124 396 aa2.46□□□□□ -2.02
TCA17YEL048C FMP41P53889 259 aaKnown RBP2.46□□□□□ -2.02
TCA17YEL048C PGA2P53903 129 aa2.46□□□□□ -2.02
TCA17YEL048C MYO5Q04439 1219 aaKnown RBP2.46□□□□□ -2.02
TCA17YEL048C RRS1Q08746 203 aaKnown RBP2.46□□□□□ -2.02
TCA17YEL048C YPL150WQ12152 901 aa2.46□□□□□ -2.02
TCA17YEL048C SMT3Q12306 101 aaKnown RBP2.46□□□□□ -2.02
TCA17YEL048C YEL009C-AA0A023PZF2 135 aa2.45□□□□□ -2.02
TCA17YEL048C HIS3P06633 220 aa2.45□□□□□ -2.02
TCA17YEL048C ZWF1P11412 505 aaKnown RBP2.45□□□□□ -2.02
TCA17YEL048C DPB2P24482 689 aaPredicted RBP2.45□□□□□ -2.02
TCA17YEL048C PPA2P28239 310 aa2.45□□□□□ -2.02
TCA17YEL048C CSG2P35206 410 aa2.45□□□□□ -2.02
TCA17YEL048C CUE1P38428 203 aa2.45□□□□□ -2.02
TCA17YEL048C COX15P40086 486 aa2.45□□□□□ -2.02
TCA17YEL048C PRE6P40303 254 aaKnown RBP2.45□□□□□ -2.02
TCA17YEL048C RPC17P47076 161 aa2.45□□□□□ -2.02
TCA17YEL048C YJR079WP47126 109 aa2.45□□□□□ -2.02
TCA17YEL048C NBP1P52919 319 aaPredicted RBP2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms