RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C FRM2P37261 193 aa6.92□□□□□ -1.3
LSP1YPL004C APL3P38065 1025 aa6.92□□□□□ -1.3
LSP1YPL004C PRE3P38624 215 aa6.92□□□□□ -1.3
LSP1YPL004C NVJ1P38881 321 aa6.92□□□□□ -1.3
LSP1YPL004C DDI1P40087 428 aa6.92□□□□□ -1.3
LSP1YPL004C PIG2P40187 538 aa6.92□□□□□ -1.3
LSP1YPL004C GAT2P40209 560 aa6.92□□□□□ -1.3
LSP1YPL004C FMC1P40491 155 aa6.92□□□□□ -1.3
LSP1YPL004C AAD14P42884 376 aa6.92□□□□□ -1.3
LSP1YPL004C YJL055WP47044 245 aa6.92□□□□□ -1.3
LSP1YPL004C SAM50P53969 484 aa6.92□□□□□ -1.3
LSP1YPL004C HHT1P61830 136 aa6.92□□□□□ -1.3
LSP1YPL004C DIG2Q03373 323 aaKnown RBP6.92□□□□□ -1.3
LSP1YPL004C LUC7Q07508 261 aaPredicted RBP6.92□□□□□ -1.3
LSP1YPL004C FRE3Q08905 711 aa6.92□□□□□ -1.3
LSP1YPL004C FRE5Q08908 694 aa6.92□□□□□ -1.3
LSP1YPL004C TGS1Q12052 315 aa6.92□□□□□ -1.3
LSP1YPL004C NOP56Q12460 504 aaKnown RBP RIP-Chip data6.92□□□□□ -1.3not detected
LSP1YPL004C URA2P07259 2214 aaKnown RBP6.92□□□□□ -1.3
LSP1YPL004C NAM2P11325 894 aa6.91□□□□□ -1.3
LSP1YPL004C PRE7P23724 241 aaKnown RBP6.91□□□□□ -1.3
LSP1YPL004C YCL042WP25572 119 aa6.91□□□□□ -1.3
LSP1YPL004C FUN26P31381 517 aa6.91□□□□□ -1.3
LSP1YPL004C VPS17P32913 551 aa6.91□□□□□ -1.3
LSP1YPL004C SPT10P35208 640 aa6.91□□□□□ -1.3
LSP1YPL004C PAU24P38155 120 aa6.91□□□□□ -1.3
LSP1YPL004C PEX32P38292 413 aa6.91□□□□□ -1.3
LSP1YPL004C YGL204CP53089 101 aa6.91□□□□□ -1.3
LSP1YPL004C SPO19Q03029 223 aa6.91□□□□□ -1.3
LSP1YPL004C RSM28Q03430 361 aa6.91□□□□□ -1.3
LSP1YPL004C GAL83Q04739 417 aa6.91□□□□□ -1.3
LSP1YPL004C RBS1Q05672 457 aaKnown RBP6.91□□□□□ -1.3
LSP1YPL004C ATG17Q06410 417 aa6.91□□□□□ -1.3
LSP1YPL004C TSR2Q06672 205 aaKnown RBP6.91□□□□□ -1.3
LSP1YPL004C ISU2Q12056 156 aa6.91□□□□□ -1.3
LSP1YPL004C RBD2Q12270 262 aa6.91□□□□□ -1.3
LSP1YPL004C YPR1Q12458 312 aa6.91□□□□□ -1.3
LSP1YPL004C SOD2P00447 233 aa6.9□□□□□ -1.3
LSP1YPL004C DSF1P0CX08 502 aa6.9□□□□□ -1.3
LSP1YPL004C YNR073CP0CX09 502 aa6.9□□□□□ -1.3
LSP1YPL004C MRP1P10662 321 aaKnown RBP6.9□□□□□ -1.3
LSP1YPL004C DOA4P32571 926 aa6.9□□□□□ -1.3
LSP1YPL004C TIR3P40552 269 aa6.9□□□□□ -1.3
LSP1YPL004C SLS1P42900 643 aa6.9□□□□□ -1.3
LSP1YPL004C CRZ1P53968 678 aa6.9□□□□□ -1.3
LSP1YPL004C YDR179W-AQ03983 463 aa6.9□□□□□ -1.3
LSP1YPL004C YDR514CQ04408 483 aa6.9□□□□□ -1.3
LSP1YPL004C HLR1Q04429 423 aa6.9□□□□□ -1.3
LSP1YPL004C MRX10Q05648 414 aa6.9□□□□□ -1.3
LSP1YPL004C RSC58Q07979 502 aa6.9□□□□□ -1.3
LSP1YPL004C RNH203Q12338 110 aa6.9□□□□□ -1.3
LSP1YPL004C ISA2Q12425 185 aa6.9□□□□□ -1.3
LSP1YPL004C TDH3P00359 332 aaKnown RBP RIP-Chip data6.89□□□□□ -1.31not detected
LSP1YPL004C MES1P00958 751 aaKnown RBP6.89□□□□□ -1.31
LSP1YPL004C AHC2P25649 128 aa6.89□□□□□ -1.31
LSP1YPL004C DBF20P32328 564 aa6.89□□□□□ -1.31
LSP1YPL004C CTK2P46962 323 aa6.89□□□□□ -1.31
LSP1YPL004C YAE1P47118 141 aaPredicted RBP6.89□□□□□ -1.31
LSP1YPL004C UBC13P52490 153 aa6.89□□□□□ -1.31
LSP1YPL004C SLI1P53304 468 aa6.89□□□□□ -1.31
LSP1YPL004C YLR152CP54072 576 aa6.89□□□□□ -1.31
LSP1YPL004C TIM10P87108 93 aa6.89□□□□□ -1.31
LSP1YPL004C SKO1Q02100 647 aa6.89□□□□□ -1.31
LSP1YPL004C GRX3Q03835 250 aa6.89□□□□□ -1.31
LSP1YPL004C YTH1Q06102 208 aaPredicted RBP6.89□□□□□ -1.31
LSP1YPL004C RRS1Q08746 203 aaKnown RBP6.89□□□□□ -1.31
LSP1YPL004C TY1A-NL1Q12391 440 aaKnown RBP6.89□□□□□ -1.31
LSP1YPL004C MET3P08536 511 aa6.88□□□□□ -1.31
LSP1YPL004C DAL80P26343 269 aa6.88□□□□□ -1.31
LSP1YPL004C NAB2P32505 525 aaKnown RBP RIP-Chip data6.88□□□□□ -1.31not detected
LSP1YPL004C SDS24P38314 527 aa6.88□□□□□ -1.31
LSP1YPL004C PCL6P40038 420 aa6.88□□□□□ -1.31
LSP1YPL004C RIO2P40160 425 aaKnown RBP6.88□□□□□ -1.31
LSP1YPL004C EFM3P47163 339 aa6.88□□□□□ -1.31
LSP1YPL004C RBL2P48606 106 aaKnown RBP6.88□□□□□ -1.31
LSP1YPL004C PMT5P52867 743 aa6.88□□□□□ -1.31
LSP1YPL004C SCW11P53189 542 aa6.88□□□□□ -1.31
LSP1YPL004C AAH1P53909 347 aa6.88□□□□□ -1.31
LSP1YPL004C YPL077CQ02831 240 aa6.88□□□□□ -1.31
LSP1YPL004C MAK3Q03503 176 aa6.88□□□□□ -1.31
LSP1YPL004C YMR252CQ04814 134 aa6.88□□□□□ -1.31
LSP1YPL004C YPR196WQ06595 470 aa6.88□□□□□ -1.31
LSP1YPL004C GAT3Q07928 141 aa6.88□□□□□ -1.31
LSP1YPL004C NKP1Q12493 238 aa6.88□□□□□ -1.31
LSP1YPL004C YEL009C-AA0A023PZF2 135 aa6.87□□□□□ -1.31
LSP1YPL004C QCR7P00128 127 aa6.87□□□□□ -1.31
LSP1YPL004C ARO3P14843 370 aaKnown RBP6.87□□□□□ -1.31
LSP1YPL004C GLC7P32598 312 aaKnown RBP6.87□□□□□ -1.31
LSP1YPL004C MIA40P36046 403 aa6.87□□□□□ -1.31
LSP1YPL004C FMP23P38231 175 aa6.87□□□□□ -1.31
LSP1YPL004C DLS1P40366 167 aa6.87□□□□□ -1.31
LSP1YPL004C YIL029CP40538 142 aa6.87□□□□□ -1.31
LSP1YPL004C OST1P41543 476 aaKnown RBP6.87□□□□□ -1.31
LSP1YPL004C GDS1P41913 522 aa6.87□□□□□ -1.31
LSP1YPL004C QRI1P43123 477 aaKnown RBP6.87□□□□□ -1.31
LSP1YPL004C NRK1P53915 240 aa6.87□□□□□ -1.31
LSP1YPL004C PRP3Q03338 469 aaPredicted RBP6.87□□□□□ -1.31
LSP1YPL004C RCF1Q03713 159 aa6.87□□□□□ -1.31
LSP1YPL004C RRP17Q04031 235 aaPredicted RBP6.87□□□□□ -1.31
LSP1YPL004C USB1Q12208 290 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms