RNA–Protein interactions for RNA: YJR001W

AVT1, Transcript of Vacuolar transporter, yeast

Gene AVT1, Length 1,809 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AVT1	YJR001W	PRP11	Q07350	266 aa	Predicted RBP	4.05	□□□□□ -1.76
AVT1	YJR001W	SYC1	Q08553	188 aa	Predicted RBP	4.05	□□□□□ -1.76
AVT1	YJR001W	THI72	Q08579	599 aa		4.05	□□□□□ -1.76
AVT1	YJR001W	RKM5	Q12367	367 aa		4.05	□□□□□ -1.76
AVT1	YJR001W	PPR1	P07272	904 aa	Predicted RBP	4.05	□□□□□ -1.76
AVT1	YJR001W	CUP2	P15315	225 aa		4.05	□□□□□ -1.76
AVT1	YJR001W	YMR31	P19955	123 aa		4.05	□□□□□ -1.76
AVT1	YJR001W	AEP1	P32493	518 aa		4.05	□□□□□ -1.76
AVT1	YJR001W	UGX2	P32772	223 aa		4.05	□□□□□ -1.76
AVT1	YJR001W	SOR1	P35497	357 aa	Known RBP	4.05	□□□□□ -1.76
AVT1	YJR001W	PHD1	P36093	366 aa		4.05	□□□□□ -1.76
AVT1	YJR001W	INM1	P38710	295 aa		4.05	□□□□□ -1.76
AVT1	YJR001W	LAS21	P40367	830 aa		4.05	□□□□□ -1.76
AVT1	YJR001W	PMT5	P52867	743 aa		4.05	□□□□□ -1.76
AVT1	YJR001W	ERV14	P53173	138 aa		4.05	□□□□□ -1.76
AVT1	YJR001W	FMP48	P53233	369 aa		4.05	□□□□□ -1.76
AVT1	YJR001W	ACT1	P60010	375 aa	Known RBP	4.05	□□□□□ -1.76
AVT1	YJR001W	NUP49	Q02199	472 aa		4.05	□□□□□ -1.76
AVT1	YJR001W	GPI17	Q04080	534 aa		4.05	□□□□□ -1.76
AVT1	YJR001W	TVP18	Q04767	167 aa		4.05	□□□□□ -1.76
AVT1	YJR001W	ATG39	Q06159	398 aa		4.05	□□□□□ -1.76
AVT1	YJR001W	BER1	Q06688	274 aa	Known RBP	4.05	□□□□□ -1.76
AVT1	YJR001W	YDL242W	Q07746	117 aa		4.05	□□□□□ -1.76
AVT1	YJR001W	SOR2	Q07786	357 aa		4.05	□□□□□ -1.76
AVT1	YJR001W	SIA1	Q12212	622 aa		4.05	□□□□□ -1.76
AVT1	YJR001W	YLR046C	Q12253	270 aa		4.05	□□□□□ -1.76
AVT1	YJR001W	TPO4	Q12256	659 aa		4.05	□□□□□ -1.76
AVT1	YJR001W	RNH203	Q12338	110 aa		4.05	□□□□□ -1.76
AVT1	YJR001W	IMA3	P0CW40	589 aa		4.04	□□□□□ -1.76
AVT1	YJR001W	IMA4	P0CW41	589 aa		4.04	□□□□□ -1.76
AVT1	YJR001W	MRPL44	P19956	98 aa		4.04	□□□□□ -1.76
AVT1	YJR001W	CDC50	P25656	391 aa		4.04	□□□□□ -1.76
AVT1	YJR001W	CTS1	P29029	562 aa		4.04	□□□□□ -1.76
AVT1	YJR001W	PEX4	P29340	183 aa		4.04	□□□□□ -1.76
AVT1	YJR001W	OCH1	P31755	480 aa		4.04	□□□□□ -1.76
AVT1	YJR001W	CYS4	P32582	507 aa	Known RBP	4.04	□□□□□ -1.76
AVT1	YJR001W	RRP4	P38792	359 aa	Known RBP	4.04	□□□□□ -1.76
AVT1	YJR001W	CHL4	P38907	458 aa		4.04	□□□□□ -1.76
AVT1	YJR001W	COG3	P40094	801 aa		4.04	□□□□□ -1.76
AVT1	YJR001W	COA1	P40452	197 aa		4.04	□□□□□ -1.76
AVT1	YJR001W	YIR016W	P40572	265 aa		4.04	□□□□□ -1.76
AVT1	YJR001W	RPL10	P41805	221 aa	Known RBP	4.04	□□□□□ -1.76
AVT1	YJR001W	YJR011C	P47086	261 aa	Predicted RBP	4.04	□□□□□ -1.76
AVT1	YJR001W	ERG26	P53199	349 aa	Known RBP	4.04	□□□□□ -1.76
AVT1	YJR001W	BIO4	P53630	237 aa		4.04	□□□□□ -1.76
AVT1	YJR001W	CUZ1	P53899	274 aa		4.04	□□□□□ -1.76
AVT1	YJR001W	DLT1	Q04216	342 aa		4.04	□□□□□ -1.76
AVT1	YJR001W	GMC1	Q04399	608 aa		4.04	□□□□□ -1.76
AVT1	YJR001W	IZH3	Q07959	543 aa		4.04	□□□□□ -1.76
AVT1	YJR001W	IMA2	Q08295	589 aa		4.04	□□□□□ -1.76
AVT1	YJR001W	NCE102	Q12207	173 aa	RIP-Chip data	4.04	□□□□□ -1.76	not detected
AVT1	YJR001W	USB1	Q12208	290 aa	Known RBP	4.04	□□□□□ -1.76
AVT1	YJR001W	PMD1	P32634	1753 aa		4.03	□□□□□ -1.76
AVT1	YJR001W	YDR157W	A0A023PZE8	133 aa		4.03	□□□□□ -1.76
AVT1	YJR001W	NUP1	P20676	1076 aa		4.03	□□□□□ -1.76
AVT1	YJR001W	SPO11	P23179	398 aa		4.03	□□□□□ -1.76
AVT1	YJR001W	EHD3	P28817	500 aa		4.03	□□□□□ -1.76
AVT1	YJR001W	VMA5	P31412	392 aa	Known RBP	4.03	□□□□□ -1.76
AVT1	YJR001W	YPT53	P36019	220 aa		4.03	□□□□□ -1.76
AVT1	YJR001W	SOL2	P37262	315 aa		4.03	□□□□□ -1.76
AVT1	YJR001W	RCK1	P38622	512 aa		4.03	□□□□□ -1.76
AVT1	YJR001W	RPP1	P38786	293 aa		4.03	□□□□□ -1.76
AVT1	YJR001W	RPF1	P38805	295 aa	Known RBP	4.03	□□□□□ -1.76
AVT1	YJR001W	PHM8	P40025	321 aa		4.03	□□□□□ -1.76
AVT1	YJR001W	RRG9	P40156	214 aa		4.03	□□□□□ -1.76
AVT1	YJR001W	BTT1	P40314	149 aa	Predicted RBP	4.03	□□□□□ -1.76
AVT1	YJR001W	YGR210C	P42942	411 aa		4.03	□□□□□ -1.76
AVT1	YJR001W	LSB3	P43603	459 aa	Known RBP	4.03	□□□□□ -1.76
AVT1	YJR001W	YGR168C	P53293	376 aa		4.03	□□□□□ -1.76
AVT1	YJR001W	YPL014W	Q02606	381 aa		4.03	□□□□□ -1.76
AVT1	YJR001W	LGE1	Q02796	332 aa	Known RBP	4.03	□□□□□ -1.76
AVT1	YJR001W	YPL077C	Q02831	240 aa		4.03	□□□□□ -1.76
AVT1	YJR001W	NRG1	Q03125	231 aa		4.03	□□□□□ -1.76
AVT1	YJR001W	AIM34	Q03673	198 aa		4.03	□□□□□ -1.76
AVT1	YJR001W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
AVT1	YJR001W	RPS10A	Q08745	105 aa	Predicted RBP	4.03	□□□□□ -1.76
AVT1	YJR001W	FEX2	Q08991	375 aa		4.03	□□□□□ -1.76
AVT1	YJR001W	TY1A-NL1	Q12391	440 aa	Known RBP	4.03	□□□□□ -1.76
AVT1	YJR001W	YBR298C-A	Q8TGK4	73 aa		4.03	□□□□□ -1.76
AVT1	YJR001W	PEP4	P07267	405 aa	Known RBP	4.02	□□□□□ -1.77
AVT1	YJR001W	PHO2	P07269	559 aa		4.02	□□□□□ -1.77
AVT1	YJR001W	POX1	P13711	748 aa		4.02	□□□□□ -1.77
AVT1	YJR001W	RFA3	P26755	122 aa	Known RBP	4.02	□□□□□ -1.77
AVT1	YJR001W	AIM26	P32858	118 aa		4.02	□□□□□ -1.77
AVT1	YJR001W	UTP30	P36144	274 aa	Known RBP	4.02	□□□□□ -1.77
AVT1	YJR001W	MRPL24	P36525	258 aa	Predicted RBP	4.02	□□□□□ -1.77
AVT1	YJR001W	LSM4	P40070	187 aa	Known RBP	4.02	□□□□□ -1.77
AVT1	YJR001W	GNA1	P43577	159 aa	Predicted RBP	4.02	□□□□□ -1.77
AVT1	YJR001W	YFR057W	P43625	151 aa		4.02	□□□□□ -1.77
AVT1	YJR001W	AIF1	P52923	378 aa		4.02	□□□□□ -1.77
AVT1	YJR001W	HCH1	P53834	153 aa		4.02	□□□□□ -1.77
AVT1	YJR001W	YNL184C	P53876	108 aa		4.02	□□□□□ -1.77
AVT1	YJR001W	YNL092W	P53934	400 aa		4.02	□□□□□ -1.77
AVT1	YJR001W	UBC7	Q02159	165 aa		4.02	□□□□□ -1.77
AVT1	YJR001W	TMN2	Q04562	672 aa		4.02	□□□□□ -1.77
AVT1	YJR001W	SNT309	Q06091	175 aa	Predicted RBP	4.02	□□□□□ -1.77
AVT1	YJR001W	YLR179C	Q06252	201 aa	Known RBP	4.02	□□□□□ -1.77
AVT1	YJR001W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
AVT1	YJR001W	SCP1	Q08873	200 aa		4.02	□□□□□ -1.77
AVT1	YJR001W	SAM4	Q08985	325 aa	Known RBP	4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms