RNA–Protein interactions for RNA: YHR012W

VPS29, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS29, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS29YHR012W YNR073CP0CX09 502 aa4.15□□□□□ -1.75
VPS29YHR012W PHO80P20052 293 aa4.15□□□□□ -1.75
VPS29YHR012W GLC7P32598 312 aaKnown RBP4.15□□□□□ -1.75
VPS29YHR012W AST1P35183 429 aa4.15□□□□□ -1.75
VPS29YHR012W SBE22P38814 852 aa4.15□□□□□ -1.75
VPS29YHR012W CHL4P38907 458 aa4.15□□□□□ -1.75
VPS29YHR012W SPO73P40031 143 aa4.15□□□□□ -1.75
VPS29YHR012W GVP36P40531 326 aaKnown RBP4.15□□□□□ -1.75
VPS29YHR012W HIS6P40545 261 aa4.15□□□□□ -1.75
VPS29YHR012W NAS2P40555 220 aa4.15□□□□□ -1.75
VPS29YHR012W GLR1P41921 483 aaKnown RBP4.15□□□□□ -1.75
VPS29YHR012W SFH5P47008 294 aa4.15□□□□□ -1.75
VPS29YHR012W COS10P52924 374 aa4.15□□□□□ -1.75
VPS29YHR012W SUT1P53032 299 aaKnown RBP4.15□□□□□ -1.75
VPS29YHR012W PRM8P53174 237 aa4.15□□□□□ -1.75
VPS29YHR012W NQM1P53228 333 aaPredicted RBP4.15□□□□□ -1.75
VPS29YHR012W PEF1P53238 335 aa4.15□□□□□ -1.75
VPS29YHR012W YMR279CQ03263 540 aa4.15□□□□□ -1.75
VPS29YHR012W YDR239CQ03780 787 aa4.15□□□□□ -1.75
VPS29YHR012W AIM36Q03798 255 aa4.15□□□□□ -1.75
VPS29YHR012W GAT3Q07928 141 aa4.15□□□□□ -1.75
VPS29YHR012W MEU1Q07938 337 aaKnown RBP RIP-Chip data4.15□□□□□ -1.75not detected
VPS29YHR012W RKM1Q08961 583 aaPredicted RBP4.15□□□□□ -1.75
VPS29YHR012W FRE8Q12209 686 aa4.15□□□□□ -1.75
VPS29YHR012W TAF3Q12297 353 aa4.15□□□□□ -1.75
VPS29YHR012W TDH2P00358 332 aaKnown RBP4.14□□□□□ -1.75
VPS29YHR012W TDH3P00359 332 aaKnown RBP RIP-Chip data4.14□□□□□ -1.75not detected
VPS29YHR012W OPI3P05375 206 aa4.14□□□□□ -1.75
VPS29YHR012W MRPS28P21771 286 aa4.14□□□□□ -1.75
VPS29YHR012W CDC3P32457 520 aaKnown RBP4.14□□□□□ -1.75
VPS29YHR012W DPH5P32469 300 aaPredicted RBP4.14□□□□□ -1.75
VPS29YHR012W MRPL6P32904 214 aa4.14□□□□□ -1.75
VPS29YHR012W YAR028WP39548 234 aa4.14□□□□□ -1.75
VPS29YHR012W THO1P40040 218 aaKnown RBP4.14□□□□□ -1.75
VPS29YHR012W PPT1P53043 513 aa4.14□□□□□ -1.75
VPS29YHR012W GEP7P53171 287 aa4.14□□□□□ -1.75
VPS29YHR012W YNR064CP53750 290 aa4.14□□□□□ -1.75
VPS29YHR012W YDC1Q02896 317 aa4.14□□□□□ -1.75
VPS29YHR012W RIM9Q04734 239 aa4.14□□□□□ -1.75
VPS29YHR012W SWA2Q06677 668 aa4.14□□□□□ -1.75
VPS29YHR012W YOR289WQ12012 251 aaPredicted RBP4.14□□□□□ -1.75
VPS29YHR012W TGS1Q12052 315 aa4.14□□□□□ -1.75
VPS29YHR012W USB1Q12208 290 aaKnown RBP4.14□□□□□ -1.75
VPS29YHR012W RIB3Q99258 208 aa4.14□□□□□ -1.75
VPS29YHR012W COX5BP00425 151 aa4.13□□□□□ -1.75
VPS29YHR012W SIR3P06701 978 aa4.13□□□□□ -1.75
VPS29YHR012W DBF2P22204 572 aa4.13□□□□□ -1.75
VPS29YHR012W CPR2P23285 205 aa4.13□□□□□ -1.75
VPS29YHR012W MEK1P24719 497 aaPredicted RBP4.13□□□□□ -1.75
VPS29YHR012W BOS1P25385 244 aa4.13□□□□□ -1.75
VPS29YHR012W VMA11P32842 164 aa4.13□□□□□ -1.75
VPS29YHR012W RPC34P32910 317 aa4.13□□□□□ -1.75
VPS29YHR012W PDX3P38075 228 aaKnown RBP4.13□□□□□ -1.75
VPS29YHR012W FLX1P40464 311 aa4.13□□□□□ -1.75
VPS29YHR012W AGP3P43548 558 aa4.13□□□□□ -1.75
VPS29YHR012W NUP49Q02199 472 aa4.13□□□□□ -1.75
VPS29YHR012W YMR315WQ04869 349 aaKnown RBP4.13□□□□□ -1.75
VPS29YHR012W YMR226CQ05016 267 aaKnown RBP4.13□□□□□ -1.75
VPS29YHR012W PRP11Q07350 266 aaPredicted RBP4.13□□□□□ -1.75
VPS29YHR012W SNA4Q07549 140 aa4.13□□□□□ -1.75
VPS29YHR012W IRC25Q07951 179 aa4.13□□□□□ -1.75
VPS29YHR012W MSA1Q08471 629 aa4.13□□□□□ -1.75
VPS29YHR012W NOP56Q12460 504 aaKnown RBP RIP-Chip data4.13□□□□□ -1.75not detected
VPS29YHR012W YBL113CQ7M4S9 792 aa4.13□□□□□ -1.75
VPS29YHR012W RPS13P05756 151 aaKnown RBP4.12□□□□□ -1.75
VPS29YHR012W FBA1P14540 359 aaKnown RBP4.12□□□□□ -1.75
VPS29YHR012W STE18P18852 110 aa4.12□□□□□ -1.75
VPS29YHR012W MCH2P36032 473 aa4.12□□□□□ -1.75
VPS29YHR012W YPK3P38070 525 aa4.12□□□□□ -1.75
VPS29YHR012W YBR063CP38083 404 aa4.12□□□□□ -1.75
VPS29YHR012W RPS0BP46654 252 aaKnown RBP4.12□□□□□ -1.75
VPS29YHR012W YJL016WP47072 561 aa4.12□□□□□ -1.75
VPS29YHR012W VMA10P48836 114 aaKnown RBP4.12□□□□□ -1.75
VPS29YHR012W RMR1P53060 241 aa4.12□□□□□ -1.75
VPS29YHR012W MTL1P53214 551 aa4.12□□□□□ -1.75
VPS29YHR012W ARG5,6Q01217 863 aa4.12□□□□□ -1.75
VPS29YHR012W YPR098CQ06089 161 aa4.12□□□□□ -1.75
VPS29YHR012W AIM6Q07716 390 aa4.12□□□□□ -1.75
VPS29YHR012W YLR126CQ12288 251 aa4.12□□□□□ -1.75
VPS29YHR012W PCL9Q12477 304 aa4.12□□□□□ -1.75
VPS29YHR012W YCL048W-AQ2V2Q2 79 aa4.12□□□□□ -1.75
VPS29YHR012W RPC40P07703 335 aaKnown RBP4.11□□□□□ -1.75
VPS29YHR012W SPS4P09937 338 aa4.11□□□□□ -1.75
VPS29YHR012W DAL3P32459 195 aa4.11□□□□□ -1.75
VPS29YHR012W IES6P32617 166 aa4.11□□□□□ -1.75
VPS29YHR012W GPI18P38211 433 aa4.11□□□□□ -1.75
VPS29YHR012W SLM4P38247 162 aa4.11□□□□□ -1.75
VPS29YHR012W BOL3P39724 118 aa4.11□□□□□ -1.75
VPS29YHR012W PUG1P40100 303 aa4.11□□□□□ -1.75
VPS29YHR012W BNA2P47125 453 aa4.11□□□□□ -1.75
VPS29YHR012W SLI1P53304 468 aa4.11□□□□□ -1.75
VPS29YHR012W YNR048WP53740 393 aa4.11□□□□□ -1.75
VPS29YHR012W ASI2P53895 289 aa4.11□□□□□ -1.75
VPS29YHR012W SPO19Q03029 223 aa4.11□□□□□ -1.75
VPS29YHR012W OST6Q03723 332 aa4.11□□□□□ -1.75
VPS29YHR012W MSS11Q03825 758 aa4.11□□□□□ -1.75
VPS29YHR012W ELP6Q04868 273 aa4.11□□□□□ -1.75
VPS29YHR012W MRX8Q05473 314 aa4.11□□□□□ -1.75
VPS29YHR012W FRE3Q08905 711 aa4.11□□□□□ -1.75
VPS29YHR012W NKP1Q12493 238 aa4.11□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms