RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W DOA4P32571 926 aa3.95□□□□□ -1.78
DEG1YFL001W PFS1P38872 237 aa3.95□□□□□ -1.78
DEG1YFL001W UTP18P40362 594 aaPredicted RBP3.95□□□□□ -1.78
DEG1YFL001W MSS2P40990 351 aa3.95□□□□□ -1.78
DEG1YFL001W OTU1P43558 301 aa3.95□□□□□ -1.78
DEG1YFL001W YNL040WP53960 456 aaPredicted RBP3.95□□□□□ -1.78
DEG1YFL001W GMC1Q04399 608 aa3.95□□□□□ -1.78
DEG1YFL001W MSH5Q12175 901 aa3.95□□□□□ -1.78
DEG1YFL001W YPL245WQ12179 454 aaKnown RBP3.95□□□□□ -1.78
DEG1YFL001W LAG2Q92325 660 aa3.95□□□□□ -1.78
DEG1YFL001W TDH2P00358 332 aaKnown RBP3.95□□□□□ -1.78
DEG1YFL001W PHO2P07269 559 aa3.95□□□□□ -1.78
DEG1YFL001W PRB1P09232 635 aa3.95□□□□□ -1.78
DEG1YFL001W ZRC1P20107 442 aa3.95□□□□□ -1.78
DEG1YFL001W CMK2P22517 447 aa3.95□□□□□ -1.78
DEG1YFL001W SRB4P32569 687 aa3.95□□□□□ -1.78
DEG1YFL001W CYM1P32898 989 aa3.95□□□□□ -1.78
DEG1YFL001W SOL2P37262 315 aa3.95□□□□□ -1.78
DEG1YFL001W SDS24P38314 527 aa3.95□□□□□ -1.78
DEG1YFL001W PRS2P38620 318 aaKnown RBP3.95□□□□□ -1.78
DEG1YFL001W GAB1P41733 394 aa3.95□□□□□ -1.78
DEG1YFL001W MRPL50P53724 139 aa3.95□□□□□ -1.78
DEG1YFL001W TRM44Q02648 567 aaKnown RBP3.95□□□□□ -1.78
DEG1YFL001W PEX30Q06169 523 aa3.95□□□□□ -1.78
DEG1YFL001W MIM1Q08176 113 aa3.95□□□□□ -1.78
DEG1YFL001W RRG7Q08774 242 aaPredicted RBP3.95□□□□□ -1.78
DEG1YFL001W YOR376WQ08900 122 aa3.95□□□□□ -1.78
DEG1YFL001W TFC7Q12415 435 aa3.95□□□□□ -1.78
DEG1YFL001W ADF1Q2V2Q1 113 aa3.95□□□□□ -1.78
DEG1YFL001W YKL187CP34231 750 aa3.94□□□□□ -1.78
DEG1YFL001W SWD3P38123 315 aa3.94□□□□□ -1.78
DEG1YFL001W YBR241CP38142 488 aa3.94□□□□□ -1.78
DEG1YFL001W MRX3P38172 270 aa3.94□□□□□ -1.78
DEG1YFL001W VAB2P40003 282 aa3.94□□□□□ -1.78
DEG1YFL001W IBA57P47158 497 aa3.94□□□□□ -1.78
DEG1YFL001W TPN1P53099 579 aa3.94□□□□□ -1.78
DEG1YFL001W SDS23P53172 527 aa3.94□□□□□ -1.78
DEG1YFL001W NRM1P53718 249 aa3.94□□□□□ -1.78
DEG1YFL001W YNR066CP53752 436 aa3.94□□□□□ -1.78
DEG1YFL001W RNH201P53942 307 aa3.94□□□□□ -1.78
DEG1YFL001W TPS1Q00764 495 aaKnown RBP3.94□□□□□ -1.78
DEG1YFL001W ADD37Q03233 198 aa3.94□□□□□ -1.78
DEG1YFL001W MYO5Q04439 1219 aaKnown RBP3.94□□□□□ -1.78
DEG1YFL001W DPP1Q05521 289 aa3.94□□□□□ -1.78
DEG1YFL001W SFH1Q06168 426 aa3.94□□□□□ -1.78
DEG1YFL001W YOR114WQ12219 294 aa3.94□□□□□ -1.78
DEG1YFL001W ARG80P07249 177 aa3.93□□□□□ -1.78
DEG1YFL001W ISY1P21374 235 aaPredicted RBP3.93□□□□□ -1.78
DEG1YFL001W RPS5P26783 225 aaKnown RBP3.93□□□□□ -1.78
DEG1YFL001W AEP1P32493 518 aa3.93□□□□□ -1.78
DEG1YFL001W IES6P32617 166 aa3.93□□□□□ -1.78
DEG1YFL001W SHE3P38272 425 aaKnown RBP3.93□□□□□ -1.78
DEG1YFL001W BMT2P38278 337 aa3.93□□□□□ -1.78
DEG1YFL001W WSC4P38739 605 aa3.93□□□□□ -1.78
DEG1YFL001W STB1P42845 420 aa3.93□□□□□ -1.78
DEG1YFL001W ASG7P46993 209 aa3.93□□□□□ -1.78
DEG1YFL001W PGA2P53903 129 aa3.93□□□□□ -1.78
DEG1YFL001W KRE28Q04431 385 aa3.93□□□□□ -1.78
DEG1YFL001W HRT3Q12347 344 aa3.93□□□□□ -1.78
DEG1YFL001W RPL21BQ12672 160 aaKnown RBP3.93□□□□□ -1.78
DEG1YFL001W BGL2P15703 313 aaKnown RBP3.92□□□□□ -1.78
DEG1YFL001W VPS3P23643 1011 aa3.92□□□□□ -1.78
DEG1YFL001W AIM29P36154 155 aa3.92□□□□□ -1.78
DEG1YFL001W LDB7P38210 180 aa3.92□□□□□ -1.78
DEG1YFL001W YBR062CP38239 180 aa3.92□□□□□ -1.78
DEG1YFL001W EFM1P38732 585 aa3.92□□□□□ -1.78
DEG1YFL001W RPL10P41805 221 aaKnown RBP3.92□□□□□ -1.78
DEG1YFL001W MEP2P41948 499 aa3.92□□□□□ -1.78
DEG1YFL001W PEX31P53203 462 aa3.92□□□□□ -1.78
DEG1YFL001W RNY1Q02933 434 aaKnown RBP3.92□□□□□ -1.78
DEG1YFL001W INP2Q03824 705 aa3.92□□□□□ -1.78
DEG1YFL001W TAF9Q05027 157 aa3.92□□□□□ -1.78
DEG1YFL001W LIP2Q06005 328 aa3.92□□□□□ -1.78
DEG1YFL001W CTR3Q06686 241 aa3.92□□□□□ -1.78
DEG1YFL001W PER33Q12144 273 aa3.92□□□□□ -1.78
DEG1YFL001W SME1Q12330 94 aaPredicted RBP3.92□□□□□ -1.78
DEG1YFL001W RPS3P05750 240 aaKnown RBP3.91□□□□□ -1.78
DEG1YFL001W PET494P07390 489 aaPredicted RBP3.91□□□□□ -1.78
DEG1YFL001W MATALPHA1P0CY06 175 aa3.91□□□□□ -1.78
DEG1YFL001W HMLALPHA1P0CY07 175 aa3.91□□□□□ -1.78
DEG1YFL001W REV1P12689 985 aa3.91□□□□□ -1.78
DEG1YFL001W GPX1P36014 167 aa3.91□□□□□ -1.78
DEG1YFL001W SHC1P39000 512 aa3.91□□□□□ -1.78
DEG1YFL001W IGD1P43598 195 aa3.91□□□□□ -1.78
DEG1YFL001W NBP1P52919 319 aaPredicted RBP3.91□□□□□ -1.78
DEG1YFL001W RMI1Q02685 241 aa3.91□□□□□ -1.78
DEG1YFL001W YML018CQ03730 393 aa3.91□□□□□ -1.78
DEG1YFL001W YDR115WQ04598 105 aa3.91□□□□□ -1.78
DEG1YFL001W YTH1Q06102 208 aaPredicted RBP3.91□□□□□ -1.78
DEG1YFL001W DIB1Q06819 143 aaPredicted RBP3.91□□□□□ -1.78
DEG1YFL001W CSM4Q08955 156 aa3.91□□□□□ -1.78
DEG1YFL001W MMT2Q08970 484 aa3.91□□□□□ -1.78
DEG1YFL001W WTM1Q12363 437 aaKnown RBP3.91□□□□□ -1.78
DEG1YFL001W DAL81P21657 970 aa3.9□□□□□ -1.79
DEG1YFL001W ATG12P38316 186 aa3.9□□□□□ -1.79
DEG1YFL001W MAL13P53338 473 aa3.9□□□□□ -1.79
DEG1YFL001W NOP13P53883 403 aaKnown RBP RIP-Chip data3.9□□□□□ -1.79not detected
DEG1YFL001W SEC10Q06245 871 aa3.9□□□□□ -1.79
DEG1YFL001W YPR172WQ06608 200 aa3.9□□□□□ -1.79
DEG1YFL001W YOR292CQ08743 309 aa3.9□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 46.7 ms