RNA–Protein interactions for RNA: YDR301W

CFT1, Transcript of RNA-binding subunit of the mRNA cleavage and polyadenylation factor, yeastyeast

Gene CFT1, Length 4,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT1YDR301W SMB1P40018 196 aaKnown RBP1.51□□□□□ -2.17
CFT1YDR301W SLZ1P40167 298 aa1.51□□□□□ -2.17
CFT1YDR301W RFC4P40339 323 aaKnown RBP1.51□□□□□ -2.17
CFT1YDR301W XBP1P40489 647 aa1.51□□□□□ -2.17
CFT1YDR301W SNO3P43544 222 aa1.51□□□□□ -2.17
CFT1YDR301W PRY1P47032 299 aa1.51□□□□□ -2.17
CFT1YDR301W PMT5P52867 743 aa1.51□□□□□ -2.17
CFT1YDR301W RMD9P53140 646 aaKnown RBP1.51□□□□□ -2.17
CFT1YDR301W CPR8P53728 308 aa1.51□□□□□ -2.17
CFT1YDR301W NUP116Q02630 1113 aa1.51□□□□□ -2.17
CFT1YDR301W YPL108WQ02872 168 aaPredicted RBP1.51□□□□□ -2.17
CFT1YDR301W PRP3Q03338 469 aaPredicted RBP1.51□□□□□ -2.17
CFT1YDR301W BNA7Q04066 261 aa1.51□□□□□ -2.17
CFT1YDR301W TAZ1Q06510 381 aa1.51□□□□□ -2.17
CFT1YDR301W CYK3Q07533 885 aa1.51□□□□□ -2.17
CFT1YDR301W YOR352WQ08816 343 aa1.51□□□□□ -2.17
CFT1YDR301W RPL7BQ12213 244 aaKnown RBP1.51□□□□□ -2.17
CFT1YDR301W TY1A-BLQ12266 440 aa1.51□□□□□ -2.17
CFT1YDR301W YLR126CQ12288 251 aa1.51□□□□□ -2.17
CFT1YDR301W SWM1Q12379 170 aa1.51□□□□□ -2.17
CFT1YDR301W URE2P23202 354 aaKnown RBP1.5□□□□□ -2.17
CFT1YDR301W EXG1P23776 448 aaKnown RBP1.5□□□□□ -2.17
CFT1YDR301W HYM1P32464 399 aa1.5□□□□□ -2.17
CFT1YDR301W KRE6P32486 720 aa1.5□□□□□ -2.17
CFT1YDR301W AFR1P33304 620 aa1.5□□□□□ -2.17
CFT1YDR301W YBR063CP38083 404 aa1.5□□□□□ -2.17
CFT1YDR301W DTR1P38125 572 aa1.5□□□□□ -2.17
CFT1YDR301W GPX2P38143 162 aa1.5□□□□□ -2.17
CFT1YDR301W OM14P38325 134 aa1.5□□□□□ -2.17
CFT1YDR301W SBE22P38814 852 aa1.5□□□□□ -2.17
CFT1YDR301W JLP2P40206 208 aa1.5□□□□□ -2.17
CFT1YDR301W LSM1P47017 172 aaKnown RBP1.5□□□□□ -2.17
CFT1YDR301W SYF2P53277 215 aaPredicted RBP1.5□□□□□ -2.17
CFT1YDR301W SAM50P53969 484 aa1.5□□□□□ -2.17
CFT1YDR301W RPL6AQ02326 176 aaKnown RBP1.5□□□□□ -2.17
CFT1YDR301W MRPS16Q02608 121 aa1.5□□□□□ -2.17
CFT1YDR301W SDC1Q03323 175 aa1.5□□□□□ -2.17
CFT1YDR301W SWA2Q06677 668 aa1.5□□□□□ -2.17
CFT1YDR301W MDM36Q06820 579 aa1.5□□□□□ -2.17
CFT1YDR301W MIM1Q08176 113 aa1.5□□□□□ -2.17
CFT1YDR301W MED2Q12124 431 aa1.5□□□□□ -2.17
CFT1YDR301W NPC2Q12408 173 aa1.5□□□□□ -2.17
CFT1YDR301W ACC1Q00955 2233 aaKnown RBP1.5□□□□□ -2.17
CFT1YDR301W SIR2P06700 562 aa1.5□□□□□ -2.17
CFT1YDR301W DFR1P07807 211 aaKnown RBP RIP-Chip data1.5□□□□□ -2.17not detected
CFT1YDR301W CKA1P15790 372 aa1.5□□□□□ -2.17
CFT1YDR301W RPS5P26783 225 aaKnown RBP1.5□□□□□ -2.17
CFT1YDR301W SPT14P32363 452 aa1.5□□□□□ -2.17
CFT1YDR301W ECM4P36156 370 aa1.5□□□□□ -2.17
CFT1YDR301W APD1P38281 316 aa1.5□□□□□ -2.17
CFT1YDR301W SDS24P38314 527 aa1.5□□□□□ -2.17
CFT1YDR301W YHR180WP38868 163 aa1.5□□□□□ -2.17
CFT1YDR301W GPI16P38875 610 aa1.5□□□□□ -2.17
CFT1YDR301W PTH1P38876 190 aaKnown RBP1.5□□□□□ -2.17
CFT1YDR301W PHM8P40025 321 aa1.5□□□□□ -2.17
CFT1YDR301W SDP1P40479 209 aa1.5□□□□□ -2.17
CFT1YDR301W DIE2P50076 525 aa1.5□□□□□ -2.17
CFT1YDR301W YIP5P53108 310 aa1.5□□□□□ -2.17
CFT1YDR301W NCE103P53615 221 aa1.5□□□□□ -2.17
CFT1YDR301W PGA1P53896 198 aa1.5□□□□□ -2.17
CFT1YDR301W NUP49Q02199 472 aa1.5□□□□□ -2.17
CFT1YDR301W GPI17Q04080 534 aa1.5□□□□□ -2.17
CFT1YDR301W COX20Q04935 205 aa1.5□□□□□ -2.17
CFT1YDR301W NGL1Q08213 363 aaKnown RBP1.5□□□□□ -2.17
CFT1YDR301W MDM32Q12171 622 aa1.5□□□□□ -2.17
CFT1YDR301W PRP46Q12417 451 aaPredicted RBP1.5□□□□□ -2.17
CFT1YDR301W PRB1P09232 635 aa1.5□□□□□ -2.17
CFT1YDR301W SPS4P09937 338 aa1.5□□□□□ -2.17
CFT1YDR301W NAM2P11325 894 aa1.5□□□□□ -2.17
CFT1YDR301W YCK1P23291 538 aa1.5□□□□□ -2.17
CFT1YDR301W PUT3P25502 979 aaPredicted RBP1.5□□□□□ -2.17
CFT1YDR301W TRR1P29509 319 aaKnown RBP1.5□□□□□ -2.17
CFT1YDR301W PRE2P30656 287 aaKnown RBP1.5□□□□□ -2.17
CFT1YDR301W MDH3P32419 343 aaKnown RBP RIP-Chip data1.5□□□□□ -2.17not detected
CFT1YDR301W NDC1P32500 655 aa1.5□□□□□ -2.17
CFT1YDR301W SRP102P36057 244 aaPredicted RBP1.5□□□□□ -2.17
CFT1YDR301W YJL055WP47044 245 aa1.5□□□□□ -2.17
CFT1YDR301W YGR126WP53274 230 aa1.5□□□□□ -2.17
CFT1YDR301W EOS1P53938 366 aa1.5□□□□□ -2.17
CFT1YDR301W YLR152CP54072 576 aa1.5□□□□□ -2.17
CFT1YDR301W INP1Q03694 420 aa1.5□□□□□ -2.17
CFT1YDR301W RGC1Q06108 1083 aaKnown RBP1.5□□□□□ -2.17
CFT1YDR301W PHO92Q06390 306 aa1.5□□□□□ -2.17
CFT1YDR301W BRE4Q07660 1125 aa1.5□□□□□ -2.17
CFT1YDR301W RFU1Q08003 200 aa1.5□□□□□ -2.17
CFT1YDR301W GSH2Q08220 491 aa1.5□□□□□ -2.17
CFT1YDR301W RBD2Q12270 262 aa1.5□□□□□ -2.17
CFT1YDR301W CYC1P00044 109 aaPredicted RBP1.5□□□□□ -2.17
CFT1YDR301W SOD2P00447 233 aa1.5□□□□□ -2.17
CFT1YDR301W GPM1P00950 247 aaKnown RBP1.5□□□□□ -2.17
CFT1YDR301W MET17P06106 444 aa1.5□□□□□ -2.17
CFT1YDR301W STF2P16965 84 aa1.5□□□□□ -2.17
CFT1YDR301W RPB8P20436 146 aa1.5□□□□□ -2.17
CFT1YDR301W GAS1P22146 559 aaKnown RBP1.5□□□□□ -2.17
CFT1YDR301W DBF2P22204 572 aa1.5□□□□□ -2.17
CFT1YDR301W IFM1P25038 676 aa1.5□□□□□ -2.17
CFT1YDR301W RAD51P25454 400 aa1.5□□□□□ -2.17
CFT1YDR301W PEX4P29340 183 aa1.5□□□□□ -2.17
CFT1YDR301W SPS18P32572 300 aa1.5□□□□□ -2.17
CFT1YDR301W REC114P32841 428 aa1.5□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms