RNA–Protein interactions for RNA: YDR097C

MSH6, Transcript of Protein required for mismatch repair in mitosis and meiosis, yeastyeast

Gene MSH6, Length 3,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH6YDR097C SDH3P33421 198 aa1.53□□□□□ -2.16
MSH6YDR097C RCN1P36054 211 aa1.53□□□□□ -2.16
MSH6YDR097C DTR1P38125 572 aa1.53□□□□□ -2.16
MSH6YDR097C MAL32P38158 584 aa1.53□□□□□ -2.16
MSH6YDR097C RRP3P38712 501 aaKnown RBP1.53□□□□□ -2.16
MSH6YDR097C YHL049CP38722 271 aa1.53□□□□□ -2.16
MSH6YDR097C RTC3P38804 111 aaPredicted RBP1.53□□□□□ -2.16
MSH6YDR097C FRT2P39734 528 aa1.53□□□□□ -2.16
MSH6YDR097C AST2P39945 430 aaKnown RBP1.53□□□□□ -2.16
MSH6YDR097C YEL075CP39972 122 aa1.53□□□□□ -2.16
MSH6YDR097C YER189WP40104 122 aa1.53□□□□□ -2.16
MSH6YDR097C YFL064CP43540 174 aa1.53□□□□□ -2.16
MSH6YDR097C AGP3P43548 558 aa1.53□□□□□ -2.16
MSH6YDR097C MDV1P47025 714 aa1.53□□□□□ -2.16
MSH6YDR097C LIF1P53150 421 aa1.53□□□□□ -2.16
MSH6YDR097C MST27P53176 234 aa1.53□□□□□ -2.16
MSH6YDR097C MAL12P53341 584 aa1.53□□□□□ -2.16
MSH6YDR097C WSC2P53832 503 aa1.53□□□□□ -2.16
MSH6YDR097C ERG13P54839 491 aaKnown RBP1.53□□□□□ -2.16
MSH6YDR097C FMN1Q03778 218 aa1.53□□□□□ -2.16
MSH6YDR097C INM2Q05533 292 aa1.53□□□□□ -2.16
MSH6YDR097C RDL2Q08742 149 aaKnown RBP1.53□□□□□ -2.16
MSH6YDR097C TIP41Q12199 356 aa1.53□□□□□ -2.16
MSH6YDR097C YCL021W-AQ96VH3 125 aa1.53□□□□□ -2.16
MSH6YDR097C HEM4P06174 275 aa1.53□□□□□ -2.17
MSH6YDR097C SPT15P13393 240 aaKnown RBP1.53□□□□□ -2.17
MSH6YDR097C RPB4P20433 221 aaPredicted RBP1.53□□□□□ -2.17
MSH6YDR097C TPS2P31688 896 aaKnown RBP1.53□□□□□ -2.17
MSH6YDR097C SWD2P36104 329 aaPredicted RBP1.53□□□□□ -2.17
MSH6YDR097C YHL044WP38727 235 aa1.53□□□□□ -2.17
MSH6YDR097C VMA22P38784 181 aa1.53□□□□□ -2.17
MSH6YDR097C TRM5P38793 499 aa1.53□□□□□ -2.17
MSH6YDR097C AVT6P40074 448 aa1.53□□□□□ -2.17
MSH6YDR097C ALG8P40351 577 aa1.53□□□□□ -2.17
MSH6YDR097C DFG10P40526 253 aa1.53□□□□□ -2.17
MSH6YDR097C ATG18P43601 500 aa1.53□□□□□ -2.17
MSH6YDR097C TPS1Q00764 495 aaKnown RBP1.53□□□□□ -2.17
MSH6YDR097C PIR3Q03180 325 aa1.53□□□□□ -2.17
MSH6YDR097C HER2Q03557 464 aa1.53□□□□□ -2.17
MSH6YDR097C CCE1Q03702 353 aa1.53□□□□□ -2.17
MSH6YDR097C CTS2Q06350 511 aa1.53□□□□□ -2.17
MSH6YDR097C NDD1Q08887 554 aa1.53□□□□□ -2.17
MSH6YDR097C IES3Q12345 250 aa1.53□□□□□ -2.17
MSH6YDR097C HTZ1Q12692 134 aaKnown RBP1.53□□□□□ -2.17
MSH6YDR097C UBR1P19812 1950 aa1.52□□□□□ -2.17
MSH6YDR097C RPS8AP0CX39 200 aaKnown RBP1.52□□□□□ -2.17
MSH6YDR097C RPS8BP0CX40 200 aaKnown RBP1.52□□□□□ -2.17
MSH6YDR097C ERD2P18414 219 aa1.52□□□□□ -2.17
MSH6YDR097C MRPL25P23369 157 aa1.52□□□□□ -2.17
MSH6YDR097C VMA5P31412 392 aaKnown RBP1.52□□□□□ -2.17
MSH6YDR097C SKG6P32900 734 aaPredicted RBP1.52□□□□□ -2.17
MSH6YDR097C YER186CP40101 306 aa1.52□□□□□ -2.17
MSH6YDR097C YIL169CP40442 995 aa1.52□□□□□ -2.17
MSH6YDR097C MAM33P40513 266 aa1.52□□□□□ -2.17
MSH6YDR097C YMR209CQ03648 457 aa1.52□□□□□ -2.17
MSH6YDR097C ENT5Q03769 411 aaKnown RBP1.52□□□□□ -2.17
MSH6YDR097C TRM82Q03774 444 aa1.52□□□□□ -2.17
MSH6YDR097C GPI17Q04080 534 aa1.52□□□□□ -2.17
MSH6YDR097C COX20Q04935 205 aa1.52□□□□□ -2.17
MSH6YDR097C TSR1Q07381 788 aaKnown RBP1.52□□□□□ -2.17
MSH6YDR097C SHS1Q07657 551 aa1.52□□□□□ -2.17
MSH6YDR097C SNX3Q08826 162 aaKnown RBP1.52□□□□□ -2.17
MSH6YDR097C YPR202WQ08993 238 aa1.52□□□□□ -2.17
MSH6YDR097C MED4Q12343 284 aa1.52□□□□□ -2.17
MSH6YDR097C YMR230W-AQ3E7B5 62 aa1.52□□□□□ -2.17
MSH6YDR097C YCL012CQ8J0M4 134 aa1.52□□□□□ -2.17
MSH6YDR097C TDH2P00358 332 aaKnown RBP1.52□□□□□ -2.17
MSH6YDR097C RAD10P06838 210 aa1.52□□□□□ -2.17
MSH6YDR097C MIR1P23641 311 aaKnown RBP1.52□□□□□ -2.17
MSH6YDR097C PEX3P28795 441 aa1.52□□□□□ -2.17
MSH6YDR097C PMT2P31382 759 aa1.52□□□□□ -2.17
MSH6YDR097C ZRT1P32804 376 aa1.52□□□□□ -2.17
MSH6YDR097C SMF2P38778 549 aa1.52□□□□□ -2.17
MSH6YDR097C NBP1P52919 319 aaPredicted RBP1.52□□□□□ -2.17
MSH6YDR097C MIG2P53035 382 aa1.52□□□□□ -2.17
MSH6YDR097C HOP2P53187 214 aa1.52□□□□□ -2.17
MSH6YDR097C CGR1P53188 120 aa1.52□□□□□ -2.17
MSH6YDR097C POP6P53218 158 aa1.52□□□□□ -2.17
MSH6YDR097C RTC4P53850 401 aa1.52□□□□□ -2.17
MSH6YDR097C REX2P54964 269 aaKnown RBP1.52□□□□□ -2.17
MSH6YDR097C TDA1Q03533 586 aa1.52□□□□□ -2.17
MSH6YDR097C GPN3Q06543 272 aa1.52□□□□□ -2.17
MSH6YDR097C JID1Q12350 301 aa1.52□□□□□ -2.17
MSH6YDR097C UBA3Q99344 299 aa1.52□□□□□ -2.17
MSH6YDR097C CMD1P06787 147 aaKnown RBP1.52□□□□□ -2.17
MSH6YDR097C REV1P12689 985 aa1.52□□□□□ -2.17
MSH6YDR097C ERD1P16151 362 aa1.52□□□□□ -2.17
MSH6YDR097C CWP1P28319 239 aa1.52□□□□□ -2.17
MSH6YDR097C MRPL6P32904 214 aa1.52□□□□□ -2.17
MSH6YDR097C EFM1P38732 585 aa1.52□□□□□ -2.17
MSH6YDR097C MDM31P38880 579 aa1.52□□□□□ -2.17
MSH6YDR097C MET30P39014 640 aa1.52□□□□□ -2.17
MSH6YDR097C DDI1P40087 428 aa1.52□□□□□ -2.17
MSH6YDR097C XBP1P40489 647 aa1.52□□□□□ -2.17
MSH6YDR097C YFL067WP43537 175 aa1.52□□□□□ -2.17
MSH6YDR097C PGA2P53903 129 aa1.52□□□□□ -2.17
MSH6YDR097C ELP3Q02908 557 aaKnown RBP1.52□□□□□ -2.17
MSH6YDR097C YDR476CQ03362 224 aa1.52□□□□□ -2.17
MSH6YDR097C YET2Q04210 160 aa1.52□□□□□ -2.17
MSH6YDR097C FMP42Q04991 504 aa1.52□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 238.2 ms