RNA–Protein interactions for RNA: SCR1

SCR1, Transcript of RNA subunit of the Signal Recognition Particle (SRP), yeastyeast

Gene SCR1, Length 522 nt, Biotype ncRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCR1SCR1 PUT3P25502 979 aaPredicted RBP12.71□□□□□ -0.37
SCR1SCR1 ECM14P38836 430 aa12.71□□□□□ -0.37
SCR1SCR1 TEX1P53851 422 aaKnown RBP12.71□□□□□ -0.37
SCR1SCR1 SED1Q01589 338 aa12.71□□□□□ -0.37
SCR1SCR1 YPL077CQ02831 240 aa12.71□□□□□ -0.37
SCR1SCR1 RKM1Q08961 583 aaPredicted RBP12.71□□□□□ -0.37
SCR1SCR1 THP3Q12049 470 aaKnown RBP12.71□□□□□ -0.37
SCR1SCR1 YGK3Q12222 375 aaPredicted RBP12.71□□□□□ -0.37
SCR1SCR1 TDH3P00359 332 aaKnown RBP RIP-Chip data12.7□□□□□ -0.38not detected
SCR1SCR1 RPL6BP05739 176 aaKnown RBP12.7□□□□□ -0.38
SCR1SCR1 MRT4P33201 236 aaKnown RBP12.7□□□□□ -0.38
SCR1SCR1 ANR2P36090 516 aaPredicted RBP12.7□□□□□ -0.38
SCR1SCR1 FRM2P37261 193 aa12.7□□□□□ -0.38
SCR1SCR1 LSM4P40070 187 aaKnown RBP12.7□□□□□ -0.38
SCR1SCR1 YIL029CP40538 142 aa12.7□□□□□ -0.38
SCR1SCR1 SBH2P52871 88 aa12.7□□□□□ -0.38
SCR1SCR1 GPI17Q04080 534 aa12.7□□□□□ -0.38
SCR1SCR1 YLR173WQ06247 608 aa12.7□□□□□ -0.38
SCR1SCR1 LUC7Q07508 261 aaPredicted RBP12.7□□□□□ -0.38
SCR1SCR1 RRS1Q08746 203 aaKnown RBP12.7□□□□□ -0.38
SCR1SCR1 GEP5Q12393 293 aa12.7□□□□□ -0.38
SCR1SCR1 PDE2P06776 526 aa12.69□□□□□ -0.38
SCR1SCR1 GLC7P32598 312 aaKnown RBP12.69□□□□□ -0.38
SCR1SCR1 MNS1P32906 549 aa12.69□□□□□ -0.38
SCR1SCR1 BAP2P38084 609 aa12.69□□□□□ -0.38
SCR1SCR1 TAT1P38085 619 aa12.69□□□□□ -0.38
SCR1SCR1 YIL012WP40551 113 aa12.69□□□□□ -0.38
SCR1SCR1 TIR3P40552 269 aa12.69□□□□□ -0.38
SCR1SCR1 YJL016WP47072 561 aa12.69□□□□□ -0.38
SCR1SCR1 GAL83Q04739 417 aa12.69□□□□□ -0.38
SCR1SCR1 FSH3Q99369 266 aa12.69□□□□□ -0.38
SCR1SCR1 PUB1P32588 453 aaKnown RBP RIP-Chip data12.68□□□□□ -0.38not detected
SCR1SCR1 TIF3P34167 436 aaKnown RBP12.68□□□□□ -0.38
SCR1SCR1 ARO9P38840 513 aaPredicted RBP12.68□□□□□ -0.38
SCR1SCR1 YER121WP40076 114 aa12.68□□□□□ -0.38
SCR1SCR1 MTL1P53214 551 aa12.68□□□□□ -0.38
SCR1SCR1 SLI1P53304 468 aa12.68□□□□□ -0.38
SCR1SCR1 MDH1P17505 334 aaKnown RBP RIP-Chip data12.67□□□□□ -0.38not detected
SCR1SCR1 PCL1P24867 279 aa12.67□□□□□ -0.38
SCR1SCR1 MTC2P34246 357 aa12.67□□□□□ -0.38
SCR1SCR1 FLX1P40464 311 aa12.67□□□□□ -0.38
SCR1SCR1 FMC1P40491 155 aa12.67□□□□□ -0.38
SCR1SCR1 GVP36P40531 326 aaKnown RBP12.67□□□□□ -0.38
SCR1SCR1 EGT2P42835 1041 aa12.67□□□□□ -0.38
SCR1SCR1 NRK1P53915 240 aa12.67□□□□□ -0.38
SCR1SCR1 YMR279CQ03263 540 aa12.67□□□□□ -0.38
SCR1SCR1 TSR2Q06672 205 aaKnown RBP12.67□□□□□ -0.38
SCR1SCR1 GAT3Q07928 141 aa12.67□□□□□ -0.38
SCR1SCR1 YOR238WQ08634 303 aa12.67□□□□□ -0.38
SCR1SCR1 FRE3Q08905 711 aa12.67□□□□□ -0.38
SCR1SCR1 USB1Q12208 290 aaKnown RBP12.67□□□□□ -0.38
SCR1SCR1 YOL114CQ12322 202 aa12.67□□□□□ -0.38
SCR1SCR1 MES1P00958 751 aaKnown RBP12.66□□□□□ -0.38
SCR1SCR1 HNM1P19807 563 aa12.66□□□□□ -0.38
SCR1SCR1 YKR015CP36111 568 aa12.66□□□□□ -0.38
SCR1SCR1 FAT1P38225 669 aa12.66□□□□□ -0.38
SCR1SCR1 CTK2P46962 323 aa12.66□□□□□ -0.38
SCR1SCR1 PPT1P53043 513 aa12.66□□□□□ -0.38
SCR1SCR1 YNR048WP53740 393 aa12.66□□□□□ -0.38
SCR1SCR1 YNL046WP53956 172 aa12.66□□□□□ -0.38
SCR1SCR1 GMC1Q04399 608 aa12.66□□□□□ -0.38
SCR1SCR1 YDR514CQ04408 483 aa12.66□□□□□ -0.38
SCR1SCR1 GSH2Q08220 491 aa12.66□□□□□ -0.38
SCR1SCR1 YML003WP0CF16 290 aa12.65□□□□□ -0.38
SCR1SCR1 ENA1P13587 1091 aa12.65□□□□□ -0.38
SCR1SCR1 THI2P38141 450 aa12.65□□□□□ -0.38
SCR1SCR1 PXR1P53335 271 aaPredicted RBP12.65□□□□□ -0.38
SCR1SCR1 PAU12P53343 120 aa12.65□□□□□ -0.38
SCR1SCR1 AAH1P53909 347 aa12.65□□□□□ -0.38
SCR1SCR1 CIK1Q01649 594 aa12.65□□□□□ -0.38
SCR1SCR1 ENA2Q01896 1091 aa12.65□□□□□ -0.38
SCR1SCR1 RBS1Q05672 457 aaKnown RBP12.65□□□□□ -0.38
SCR1SCR1 YPR1Q12458 312 aa12.65□□□□□ -0.38
SCR1SCR1 FRE6Q12473 712 aa12.65□□□□□ -0.38
SCR1SCR1 ENA5Q12691 1091 aa12.65□□□□□ -0.38
SCR1SCR1 SOD2P00447 233 aa12.64□□□□□ -0.39
SCR1SCR1 VPS17P32913 551 aa12.64□□□□□ -0.39
SCR1SCR1 MCH2P36032 473 aa12.64□□□□□ -0.39
SCR1SCR1 SHM2P37291 469 aaKnown RBP12.64□□□□□ -0.39
SCR1SCR1 DLS1P40366 167 aa12.64□□□□□ -0.39
SCR1SCR1 HHT1P61830 136 aa12.64□□□□□ -0.39
SCR1SCR1 YLR152CP54072 576 aa12.63□□□□□ -0.39
SCR1SCR1 YDC1Q02896 317 aa12.63□□□□□ -0.39
SCR1SCR1 NEJ1Q06148 342 aa12.63□□□□□ -0.39
SCR1SCR1 COX9P07255 59 aa12.62□□□□□ -0.39
SCR1SCR1 DEG1P31115 442 aaKnown RBP12.62□□□□□ -0.39
SCR1SCR1 FUN26P31381 517 aa12.62□□□□□ -0.39
SCR1SCR1 PEX32P38292 413 aa12.62□□□□□ -0.39
SCR1SCR1 ARC40P38328 384 aaKnown RBP12.62□□□□□ -0.39
SCR1SCR1 NVJ1P38881 321 aa12.62□□□□□ -0.39
SCR1SCR1 PMT6P42934 759 aa12.62□□□□□ -0.39
SCR1SCR1 ISA2Q12425 185 aa12.62□□□□□ -0.39
SCR1SCR1 MET17P06106 444 aa12.61□□□□□ -0.39
SCR1SCR1 RPL30P14120 105 aaKnown RBP12.61□□□□□ -0.39
SCR1SCR1 OST1P41543 476 aaKnown RBP12.61□□□□□ -0.39
SCR1SCR1 YPR098CQ06089 161 aa12.61□□□□□ -0.39
SCR1SCR1 ERP4Q12450 207 aa12.61□□□□□ -0.39
SCR1SCR1 REP1P03871 373 aa12.6□□□□□ -0.39
SCR1SCR1 MRP1P10662 321 aaKnown RBP12.6□□□□□ -0.39
SCR1SCR1 AHC2P25649 128 aa12.6□□□□□ -0.39
Retrieved 100 of 5,963 RNA–protein pairs in 98.7 ms