RNA–Protein interactions for RNA: YJL176C

SWI3, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI3, Length 2,478 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI3YJL176C RTN2Q12443 393 aa4.07□□□□□ -1.76
SWI3YJL176C RPS13P05756 151 aaKnown RBP4.07□□□□□ -1.76
SWI3YJL176C MET17P06106 444 aa4.07□□□□□ -1.76
SWI3YJL176C MDH1P17505 334 aaKnown RBP RIP-Chip data4.07□□□□□ -1.76not detected
SWI3YJL176C STE18P18852 110 aa4.07□□□□□ -1.76
SWI3YJL176C YPK3P38070 525 aa4.07□□□□□ -1.76
SWI3YJL176C BAP2P38084 609 aa4.07□□□□□ -1.76
SWI3YJL176C DTR1P38125 572 aa4.07□□□□□ -1.76
SWI3YJL176C YGP1P38616 354 aaKnown RBP4.07□□□□□ -1.76
SWI3YJL176C AVT6P40074 448 aa4.07□□□□□ -1.76
SWI3YJL176C NIT3P49954 291 aa4.07□□□□□ -1.76
SWI3YJL176C MRX8Q05473 314 aa4.07□□□□□ -1.76
SWI3YJL176C MRL1Q06815 381 aa4.07□□□□□ -1.76
SWI3YJL176C YOR378WQ08902 515 aa4.07□□□□□ -1.76
SWI3YJL176C SPS100P13130 326 aa4.06□□□□□ -1.76
SWI3YJL176C ENA1P13587 1091 aa4.06□□□□□ -1.76
SWI3YJL176C MRPS5P33759 307 aa4.06□□□□□ -1.76
SWI3YJL176C GOS1P38736 223 aa4.06□□□□□ -1.76
SWI3YJL176C PFS2P42841 465 aaKnown RBP4.06□□□□□ -1.76
SWI3YJL176C YFL051CP43552 160 aa4.06□□□□□ -1.76
SWI3YJL176C TMA20P89886 181 aaPredicted RBP4.06□□□□□ -1.76
SWI3YJL176C ENA2Q01896 1091 aa4.06□□□□□ -1.76
SWI3YJL176C SPO19Q03029 223 aa4.06□□□□□ -1.76
SWI3YJL176C AIM36Q03798 255 aa4.06□□□□□ -1.76
SWI3YJL176C API2Q04413 109 aa4.06□□□□□ -1.76
SWI3YJL176C YLR173WQ06247 608 aa4.06□□□□□ -1.76
SWI3YJL176C THP3Q12049 470 aaKnown RBP4.06□□□□□ -1.76
SWI3YJL176C TY1A-BLQ12266 440 aa4.06□□□□□ -1.76
SWI3YJL176C IZH2Q12442 317 aa4.06□□□□□ -1.76
SWI3YJL176C ENA5Q12691 1091 aa4.06□□□□□ -1.76
SWI3YJL176C SCEIP03882 235 aa4.06□□□□□ -1.76
SWI3YJL176C MTR2P34232 184 aaKnown RBP4.06□□□□□ -1.76
SWI3YJL176C SDS22P36047 338 aa4.06□□□□□ -1.76
SWI3YJL176C PRS3P38689 320 aaKnown RBP4.06□□□□□ -1.76
SWI3YJL176C YER084WP40057 128 aa4.06□□□□□ -1.76
SWI3YJL176C FMC1P40491 155 aa4.06□□□□□ -1.76
SWI3YJL176C SIP18P50263 79 aa4.06□□□□□ -1.76
SWI3YJL176C RMD9P53140 646 aaKnown RBP4.06□□□□□ -1.76
SWI3YJL176C SAY1P53324 424 aa4.06□□□□□ -1.76
SWI3YJL176C ASI3P53983 676 aa4.06□□□□□ -1.76
SWI3YJL176C NEJ1Q06148 342 aa4.06□□□□□ -1.76
SWI3YJL176C ATG17Q06410 417 aa4.06□□□□□ -1.76
SWI3YJL176C MCT1Q12283 360 aa4.06□□□□□ -1.76
SWI3YJL176C RPA135P22138 1203 aaKnown RBP4.05□□□□□ -1.76
SWI3YJL176C DBF2P22204 572 aa4.05□□□□□ -1.76
SWI3YJL176C MEK1P24719 497 aaPredicted RBP4.05□□□□□ -1.76
SWI3YJL176C ERG4P25340 473 aa4.05□□□□□ -1.76
SWI3YJL176C PUT3P25502 979 aaPredicted RBP4.05□□□□□ -1.76
SWI3YJL176C VMA6P32366 345 aaKnown RBP4.05□□□□□ -1.76
SWI3YJL176C YBR220CP38318 560 aa4.05□□□□□ -1.76
SWI3YJL176C YJL055WP47044 245 aa4.05□□□□□ -1.76
SWI3YJL176C PPT1P53043 513 aa4.05□□□□□ -1.76
SWI3YJL176C TNA1P53322 534 aa4.05□□□□□ -1.76
SWI3YJL176C DIG2Q03373 323 aaKnown RBP4.05□□□□□ -1.76
SWI3YJL176C YOL114CQ12322 202 aa4.05□□□□□ -1.76
SWI3YJL176C NOP56Q12460 504 aaKnown RBP RIP-Chip data4.05□□□□□ -1.76not detected
SWI3YJL176C CLB2P24869 491 aa4.05□□□□□ -1.76
SWI3YJL176C PUB1P32588 453 aaKnown RBP RIP-Chip data4.05□□□□□ -1.76 RIP-Chip
SWI3YJL176C MTC2P34246 357 aa4.05□□□□□ -1.76
SWI3YJL176C SPT10P35208 640 aa4.05□□□□□ -1.76
SWI3YJL176C THI2P38141 450 aa4.05□□□□□ -1.76
SWI3YJL176C PIG2P40187 538 aa4.05□□□□□ -1.76
SWI3YJL176C LOH1P47055 219 aa4.05□□□□□ -1.76
SWI3YJL176C CCC1P47818 322 aa4.05□□□□□ -1.76
SWI3YJL176C SAM50P53969 484 aa4.05□□□□□ -1.76
SWI3YJL176C THI72Q08579 599 aa4.05□□□□□ -1.76
SWI3YJL176C YOR238WQ08634 303 aa4.05□□□□□ -1.76
SWI3YJL176C RBD2Q12270 262 aa4.05□□□□□ -1.76
SWI3YJL176C NKP1Q12493 238 aa4.05□□□□□ -1.76
SWI3YJL176C CLG1P35190 452 aa4.04□□□□□ -1.76
SWI3YJL176C APL3P38065 1025 aa4.04□□□□□ -1.76
SWI3YJL176C NVJ1P38881 321 aa4.04□□□□□ -1.76
SWI3YJL176C QDR1P40475 563 aa4.04□□□□□ -1.76
SWI3YJL176C TIR3P40552 269 aa4.04□□□□□ -1.76
SWI3YJL176C AAD14P42884 376 aa4.04□□□□□ -1.76
SWI3YJL176C PAU12P53343 120 aa4.04□□□□□ -1.76
SWI3YJL176C RSM23Q01163 450 aa4.04□□□□□ -1.76
SWI3YJL176C RBS1Q05672 457 aaKnown RBP4.04□□□□□ -1.76
SWI3YJL176C FIT3Q08907 204 aa4.04□□□□□ -1.76
SWI3YJL176C PDE2P06776 526 aa4.04□□□□□ -1.76
SWI3YJL176C NAM2P11325 894 aa4.04□□□□□ -1.76
SWI3YJL176C BOS1P25385 244 aa4.04□□□□□ -1.76
SWI3YJL176C VPS17P32913 551 aa4.04□□□□□ -1.76
SWI3YJL176C CLB6P32943 380 aa4.04□□□□□ -1.76
SWI3YJL176C ANR2P36090 516 aaPredicted RBP4.04□□□□□ -1.76
SWI3YJL176C PMT6P42934 759 aa4.04□□□□□ -1.76
SWI3YJL176C RBL2P48606 106 aaKnown RBP4.04□□□□□ -1.76
SWI3YJL176C PRP3Q03338 469 aaPredicted RBP4.04□□□□□ -1.76
SWI3YJL176C YDR514CQ04408 483 aa4.04□□□□□ -1.76
SWI3YJL176C MRX10Q05648 414 aa4.04□□□□□ -1.76
SWI3YJL176C TSR2Q06672 205 aaKnown RBP4.04□□□□□ -1.76
SWI3YJL176C LUC7Q07508 261 aaPredicted RBP4.04□□□□□ -1.76
SWI3YJL176C FRE5Q08908 694 aa4.04□□□□□ -1.76
SWI3YJL176C NCE102Q12207 173 aaRIP-Chip data4.04□□□□□ -1.76not detected
SWI3YJL176C YPR1Q12458 312 aa4.04□□□□□ -1.76
SWI3YJL176C FRE6Q12473 712 aa4.04□□□□□ -1.76
SWI3YJL176C FUN26P31381 517 aa4.03□□□□□ -1.76
SWI3YJL176C YKR015CP36111 568 aa4.03□□□□□ -1.76
SWI3YJL176C DDI1P40087 428 aa4.03□□□□□ -1.76
SWI3YJL176C RIO2P40160 425 aaKnown RBP4.03□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms