RNA–Protein interactions for RNA: YGL056C

SDS23, Transcript of Protein involved in cell separation during budding, yeast

Gene SDS23, Length 1,584 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDS23	YGL056C	TLG2	Q08144	397 aa		3.18	□□□□□ -1.9
SDS23	YGL056C	PPT2	Q12036	173 aa		3.18	□□□□□ -1.9
SDS23	YGL056C	POM33	Q12164	279 aa		3.18	□□□□□ -1.9
SDS23	YGL056C	YBL111C	Q3E7Y5	667 aa		3.18	□□□□□ -1.9
SDS23	YGL056C	IZH4	Q99393	312 aa		3.18	□□□□□ -1.9
SDS23	YGL056C	TUS1	Q06412	1307 aa		3.18	□□□□□ -1.9
SDS23	YGL056C	MET16	P18408	261 aa	Predicted RBP	3.17	□□□□□ -1.9
SDS23	YGL056C	RPB4	P20433	221 aa	Predicted RBP	3.17	□□□□□ -1.9
SDS23	YGL056C	MIR1	P23641	311 aa	Known RBP	3.17	□□□□□ -1.9
SDS23	YGL056C	YCR016W	P25617	290 aa	Known RBP	3.17	□□□□□ -1.9
SDS23	YGL056C	CPR3	P25719	182 aa		3.17	□□□□□ -1.9
SDS23	YGL056C	PDC2	P32896	925 aa		3.17	□□□□□ -1.9
SDS23	YGL056C	YKL063C	P35725	167 aa		3.17	□□□□□ -1.9
SDS23	YGL056C	MCH2	P36032	473 aa		3.17	□□□□□ -1.9
SDS23	YGL056C	MSS2	P40990	351 aa		3.17	□□□□□ -1.9
SDS23	YGL056C	BNS1	P50084	137 aa		3.17	□□□□□ -1.9
SDS23	YGL056C	CDC14	Q00684	551 aa		3.17	□□□□□ -1.9
SDS23	YGL056C	YMR010W	Q03687	405 aa		3.17	□□□□□ -1.9
SDS23	YGL056C	INP2	Q03824	705 aa		3.17	□□□□□ -1.9
SDS23	YGL056C	VBA1	Q04301	562 aa		3.17	□□□□□ -1.9
SDS23	YGL056C	PBA1	Q05778	276 aa		3.17	□□□□□ -1.9
SDS23	YGL056C	SDO1	Q07953	250 aa	Known RBP	3.17	□□□□□ -1.9
SDS23	YGL056C	ADF1	Q2V2Q1	113 aa		3.17	□□□□□ -1.9
SDS23	YGL056C	YBR298C-A	Q8TGK4	73 aa		3.17	□□□□□ -1.9
SDS23	YGL056C	VPS1	P21576	704 aa	Known RBP	3.17	□□□□□ -1.9
SDS23	YGL056C	RPL16B	P26785	198 aa	Known RBP	3.17	□□□□□ -1.9
SDS23	YGL056C	KRE6	P32486	720 aa		3.17	□□□□□ -1.9
SDS23	YGL056C	PRS4	P38063	326 aa	Predicted RBP	3.17	□□□□□ -1.9
SDS23	YGL056C	RFS1	P38234	210 aa	Known RBP	3.17	□□□□□ -1.9
SDS23	YGL056C	SOP4	P39543	234 aa	Predicted RBP	3.17	□□□□□ -1.9
SDS23	YGL056C	UBC13	P52490	153 aa		3.17	□□□□□ -1.9
SDS23	YGL056C	SWC4	P53201	476 aa		3.17	□□□□□ -1.9
SDS23	YGL056C	EBS1	Q03466	884 aa	Known RBP	3.17	□□□□□ -1.9
SDS23	YGL056C	OST6	Q03723	332 aa		3.17	□□□□□ -1.9
SDS23	YGL056C	ADH6	Q04894	360 aa	Known RBP	3.17	□□□□□ -1.9
SDS23	YGL056C	SML1	Q04964	104 aa		3.17	□□□□□ -1.9
SDS23	YGL056C	SMD2	Q06217	110 aa	Known RBP	3.17	□□□□□ -1.9
SDS23	YGL056C	ATP16	Q12165	160 aa		3.17	□□□□□ -1.9
SDS23	YGL056C	UTP23	Q12339	254 aa	Known RBP	3.17	□□□□□ -1.9
SDS23	YGL056C	GIS3	Q12418	502 aa		3.17	□□□□□ -1.9
SDS23	YGL056C	CTA1	P15202	515 aa		3.16	□□□□□ -1.9
SDS23	YGL056C	RPB5	P20434	215 aa		3.16	□□□□□ -1.9
SDS23	YGL056C	RPO26	P20435	155 aa		3.16	□□□□□ -1.9
SDS23	YGL056C	DAL82	P21705	255 aa		3.16	□□□□□ -1.9
SDS23	YGL056C	MRPL6	P32904	214 aa		3.16	□□□□□ -1.9
SDS23	YGL056C	YET1	P35723	206 aa		3.16	□□□□□ -1.9
SDS23	YGL056C	TDA11	P38854	504 aa		3.16	□□□□□ -1.9
SDS23	YGL056C	PTH1	P38876	190 aa	Known RBP	3.16	□□□□□ -1.9
SDS23	YGL056C	KRE9	P39005	276 aa		3.16	□□□□□ -1.9
SDS23	YGL056C	PEX22	P39718	180 aa		3.16	□□□□□ -1.9
SDS23	YGL056C	OTU1	P43558	301 aa		3.16	□□□□□ -1.9
SDS23	YGL056C	MOB2	P43563	287 aa		3.16	□□□□□ -1.9
SDS23	YGL056C	ATG18	P43601	500 aa		3.16	□□□□□ -1.9
SDS23	YGL056C	VHT1	P53241	593 aa		3.16	□□□□□ -1.9
SDS23	YGL056C	CLD1	P53264	445 aa		3.16	□□□□□ -1.9
SDS23	YGL056C	CRH1	P53301	507 aa		3.16	□□□□□ -1.9
SDS23	YGL056C	ELP3	Q02908	557 aa	Known RBP	3.16	□□□□□ -1.9
SDS23	YGL056C	YMR317W	Q04893	1140 aa		3.16	□□□□□ -1.9
SDS23	YGL056C	TAZ1	Q06510	381 aa		3.16	□□□□□ -1.9
SDS23	YGL056C	TDH2	P00358	332 aa	Known RBP	3.15	□□□□□ -1.91
SDS23	YGL056C	CDC8	P00572	216 aa		3.15	□□□□□ -1.91
SDS23	YGL056C	ILV1	P00927	576 aa	Known RBP	3.15	□□□□□ -1.91
SDS23	YGL056C	MATALPHA1	P0CY06	175 aa		3.15	□□□□□ -1.91
SDS23	YGL056C	HMLALPHA1	P0CY07	175 aa		3.15	□□□□□ -1.91
SDS23	YGL056C	CBS2	P14905	389 aa		3.15	□□□□□ -1.91
SDS23	YGL056C	PRR1	P28708	518 aa		3.15	□□□□□ -1.91
SDS23	YGL056C	NUP2	P32499	720 aa		3.15	□□□□□ -1.91
SDS23	YGL056C	UBC6	P33296	250 aa	Predicted RBP	3.15	□□□□□ -1.91
SDS23	YGL056C	YKL071W	P36086	256 aa		3.15	□□□□□ -1.91
SDS23	YGL056C	LSM12	P38828	187 aa	Known RBP	3.15	□□□□□ -1.91
SDS23	YGL056C	CHL4	P38907	458 aa		3.15	□□□□□ -1.91
SDS23	YGL056C	PET8	P38921	284 aa		3.15	□□□□□ -1.91
SDS23	YGL056C	SHC1	P39000	512 aa		3.15	□□□□□ -1.91
SDS23	YGL056C	AIM23	P47015	356 aa		3.15	□□□□□ -1.91
SDS23	YGL056C	CDH1	P53197	566 aa		3.15	□□□□□ -1.91
SDS23	YGL056C	TPC1	P53257	314 aa		3.15	□□□□□ -1.91
SDS23	YGL056C	CPD1	P53314	239 aa		3.15	□□□□□ -1.91
SDS23	YGL056C	VAC7	P53950	1165 aa		3.15	□□□□□ -1.91
SDS23	YGL056C	ALG11	P53954	548 aa	Known RBP	3.15	□□□□□ -1.91
SDS23	YGL056C	KTR6	P54070	446 aa		3.15	□□□□□ -1.91
SDS23	YGL056C	SCS7	Q03529	384 aa		3.15	□□□□□ -1.91
SDS23	YGL056C	FUS2	Q05670	677 aa		3.15	□□□□□ -1.91
SDS23	YGL056C	MRX9	Q07349	420 aa	Known RBP	3.15	□□□□□ -1.91
SDS23	YGL056C	PAM18	Q07914	168 aa		3.15	□□□□□ -1.91
SDS23	YGL056C	FDH1	Q08911	376 aa		3.15	□□□□□ -1.91
SDS23	YGL056C	DAS2	Q12084	232 aa		3.15	□□□□□ -1.91
SDS23	YGL056C	MSH5	Q12175	901 aa		3.15	□□□□□ -1.91
SDS23	YGL056C	RIO1	Q12196	484 aa	Known RBP	3.15	□□□□□ -1.91
SDS23	YGL056C	IZH2	Q12442	317 aa		3.15	□□□□□ -1.91
SDS23	YGL056C	PRM4	Q12498	284 aa		3.15	□□□□□ -1.91
SDS23	YGL056C	ERD1	P16151	362 aa		3.14	□□□□□ -1.91
SDS23	YGL056C	ZIP1	P31111	875 aa		3.14	□□□□□ -1.91
SDS23	YGL056C	KTI12	P34253	313 aa	Known RBP	3.14	□□□□□ -1.91
SDS23	YGL056C	RCK1	P38622	512 aa		3.14	□□□□□ -1.91
SDS23	YGL056C	YNL208W	P40159	199 aa	Known RBP	3.14	□□□□□ -1.91
SDS23	YGL056C	PAN6	P40459	309 aa		3.14	□□□□□ -1.91
SDS23	YGL056C	YIA6	P40556	373 aa		3.14	□□□□□ -1.91
SDS23	YGL056C	REE1	P40893	198 aa		3.14	□□□□□ -1.91
SDS23	YGL056C	YFR057W	P43625	151 aa		3.14	□□□□□ -1.91
SDS23	YGL056C	BIR1	P47134	954 aa		3.14	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms