RNA–Protein interactions for RNA: YDL195W

SEC31, Transcript of Component of the Sec13p-Sec31p complex of the COPII vesicle coat, yeastyeast

Gene SEC31, Length 3,822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC31YDL195W EFM5P53200 248 aaKnown RBP1.84□□□□□ -2.12
SEC31YDL195W SWC4P53201 476 aa1.84□□□□□ -2.12
SEC31YDL195W FHN1P53279 174 aa1.84□□□□□ -2.12
SEC31YDL195W YGR250CP53316 781 aaKnown RBP1.84□□□□□ -2.12
SEC31YDL195W SUN4P53616 420 aa1.84□□□□□ -2.12
SEC31YDL195W CTL1Q03220 320 aaKnown RBP1.84□□□□□ -2.12
SEC31YDL195W TAF12Q03761 539 aa1.84□□□□□ -2.12
SEC31YDL195W RPN9Q04062 393 aaKnown RBP1.84□□□□□ -2.12
SEC31YDL195W CTR3Q06686 241 aa1.84□□□□□ -2.12
SEC31YDL195W DCI1Q08558 271 aa1.84□□□□□ -2.12
SEC31YDL195W YIL046W-AQ3E7Z4 54 aa1.84□□□□□ -2.12
SEC31YDL195W MEC1P38111 2368 aa1.84□□□□□ -2.12
SEC31YDL195W CDC36P06100 191 aaPredicted RBP1.83□□□□□ -2.12
SEC31YDL195W RPL11AP0C0W9 174 aaKnown RBP1.83□□□□□ -2.12
SEC31YDL195W SEC62P21825 274 aa1.83□□□□□ -2.12
SEC31YDL195W DCC1P25559 380 aa1.83□□□□□ -2.12
SEC31YDL195W LDB16P25587 256 aa1.83□□□□□ -2.12
SEC31YDL195W YCR061WP25639 631 aa1.83□□□□□ -2.12
SEC31YDL195W NTG1P31378 399 aa1.83□□□□□ -2.12
SEC31YDL195W SPS18P32572 300 aa1.83□□□□□ -2.12
SEC31YDL195W VPS21P36017 210 aaKnown RBP1.83□□□□□ -2.12
SEC31YDL195W SDH8P38345 138 aa1.83□□□□□ -2.12
SEC31YDL195W YJL118WP47022 219 aa1.83□□□□□ -2.12
SEC31YDL195W LYS20P48570 428 aaKnown RBP1.83□□□□□ -2.12
SEC31YDL195W YGL260WP53056 76 aa1.83□□□□□ -2.12
SEC31YDL195W ROG1P53118 685 aa1.83□□□□□ -2.12
SEC31YDL195W NUP53Q03790 475 aa1.83□□□□□ -2.12
SEC31YDL195W AIM36Q03798 255 aa1.83□□□□□ -2.12
SEC31YDL195W ROY1Q04847 553 aa1.83□□□□□ -2.12
SEC31YDL195W SNT309Q06091 175 aaPredicted RBP1.83□□□□□ -2.12
SEC31YDL195W FRE3Q08905 711 aa1.83□□□□□ -2.12
SEC31YDL195W BTS1Q12051 335 aa1.83□□□□□ -2.12
SEC31YDL195W RKM5Q12367 367 aa1.83□□□□□ -2.12
SEC31YDL195W RPL11BQ3E757 174 aaPredicted RBP1.83□□□□□ -2.12
SEC31YDL195W VMA9Q3E7B6 73 aa1.83□□□□□ -2.12
SEC31YDL195W RPL43AP0CX25 92 aaKnown RBP1.83□□□□□ -2.12
SEC31YDL195W RPL43BP0CX26 92 aa1.83□□□□□ -2.12
SEC31YDL195W CDC23P16522 626 aa1.83□□□□□ -2.12
SEC31YDL195W ERD2P18414 219 aa1.83□□□□□ -2.12
SEC31YDL195W SFK1P35735 353 aa1.83□□□□□ -2.12
SEC31YDL195W GPI16P38875 610 aa1.83□□□□□ -2.12
SEC31YDL195W MNL1P38888 796 aa1.83□□□□□ -2.12
SEC31YDL195W RGI2P40188 164 aa1.83□□□□□ -2.12
SEC31YDL195W YJR141WP47172 347 aaPredicted RBP1.83□□□□□ -2.12
SEC31YDL195W HXT16P47185 567 aa1.83□□□□□ -2.12
SEC31YDL195W RAD17P48581 401 aa1.83□□□□□ -2.12
SEC31YDL195W NIF3P53081 288 aa1.83□□□□□ -2.12
SEC31YDL195W HST3P53687 447 aa1.83□□□□□ -2.12
SEC31YDL195W MRPL22P53881 309 aa1.83□□□□□ -2.12
SEC31YDL195W SLU7Q02775 382 aaKnown RBP1.83□□□□□ -2.12
SEC31YDL195W YDR444WQ04093 687 aa1.83□□□□□ -2.12
SEC31YDL195W SMA2Q04658 369 aa1.83□□□□□ -2.12
SEC31YDL195W ATG10Q07879 167 aa1.83□□□□□ -2.12
SEC31YDL195W VPS68Q12016 184 aa1.83□□□□□ -2.12
SEC31YDL195W RTR2Q12378 196 aa1.83□□□□□ -2.12
SEC31YDL195W OPI3P05375 206 aa1.83□□□□□ -2.12
SEC31YDL195W YOL162WP0CF19 215 aa1.83□□□□□ -2.12
SEC31YDL195W DSF1P0CX08 502 aa1.83□□□□□ -2.12
SEC31YDL195W YNR073CP0CX09 502 aa1.83□□□□□ -2.12
SEC31YDL195W MATALPHA1P0CY06 175 aa1.83□□□□□ -2.12
SEC31YDL195W HMLALPHA1P0CY07 175 aa1.83□□□□□ -2.12
SEC31YDL195W EPT1P22140 391 aa1.83□□□□□ -2.12
SEC31YDL195W APN1P22936 367 aa1.83□□□□□ -2.12
SEC31YDL195W PUB1P32588 453 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
SEC31YDL195W YEF1P32622 495 aa1.83□□□□□ -2.12
SEC31YDL195W NPL6P32832 435 aa1.83□□□□□ -2.12
SEC31YDL195W SPC34P36131 295 aa1.83□□□□□ -2.12
SEC31YDL195W AIM3P38266 947 aaKnown RBP1.83□□□□□ -2.12
SEC31YDL195W EHT1P38295 451 aa1.83□□□□□ -2.12
SEC31YDL195W VMA22P38784 181 aa1.83□□□□□ -2.12
SEC31YDL195W MLH1P38920 769 aa1.83□□□□□ -2.12
SEC31YDL195W NUP57P48837 541 aa1.83□□□□□ -2.12
SEC31YDL195W MTM1P53320 366 aa1.83□□□□□ -2.12
SEC31YDL195W RIM13Q03792 727 aa1.83□□□□□ -2.12
SEC31YDL195W PDR8Q06149 701 aa1.83□□□□□ -2.12
SEC31YDL195W YNG1Q08465 219 aa1.83□□□□□ -2.12
SEC31YDL195W SFM1Q12314 213 aa1.83□□□□□ -2.12
SEC31YDL195W AIM45Q12480 344 aaKnown RBP1.83□□□□□ -2.12
SEC31YDL195W SNF8Q12483 233 aa1.83□□□□□ -2.12
SEC31YDL195W GAL4P04386 881 aa1.82□□□□□ -2.12
SEC31YDL195W GPI12P23797 304 aa1.82□□□□□ -2.12
SEC31YDL195W SSE2P32590 693 aaKnown RBP1.82□□□□□ -2.12
SEC31YDL195W NRP1P32770 719 aaKnown RBP RIP-Chip data1.82□□□□□ -2.12not detected
SEC31YDL195W RPC34P32910 317 aa1.82□□□□□ -2.12
SEC31YDL195W YKL162CP36052 402 aa1.82□□□□□ -2.12
SEC31YDL195W GMH1P36125 273 aa1.82□□□□□ -2.12
SEC31YDL195W SDS24P38314 527 aa1.82□□□□□ -2.12
SEC31YDL195W DHH1P39517 506 aaKnown RBP1.82□□□□□ -2.12
SEC31YDL195W CAF16P43569 289 aa1.82□□□□□ -2.12
SEC31YDL195W CIS3P47001 227 aa1.82□□□□□ -2.12
SEC31YDL195W YGL185CP53100 379 aa1.82□□□□□ -2.12
SEC31YDL195W NRM1P53718 249 aa1.82□□□□□ -2.12
SEC31YDL195W EOS1P53938 366 aa1.82□□□□□ -2.12
SEC31YDL195W YLR224WQ05947 369 aa1.82□□□□□ -2.12
SEC31YDL195W CRN1Q06440 651 aa1.82□□□□□ -2.12
SEC31YDL195W MCH4Q08268 501 aa1.82□□□□□ -2.12
SEC31YDL195W YOR283WQ12040 230 aaKnown RBP1.82□□□□□ -2.12
SEC31YDL195W TY1A-NL1Q12391 440 aaKnown RBP1.82□□□□□ -2.12
SEC31YDL195W NOP56Q12460 504 aaKnown RBP RIP-Chip data1.82□□□□□ -2.12not detected
SEC31YDL195W FMP27Q06179 2628 aa1.82□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 21 ms