RNA–Protein interactions for RNA: YOR322C

LDB19, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene LDB19, Length 2,457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB19YOR322C TY1A-JR1P0CX74 440 aa5.52□□□□□ -1.53
LDB19YOR322C TY1A-LR3P0CX75 440 aa5.52□□□□□ -1.53
LDB19YOR322C TY1A-ML2P0CX76 440 aa5.52□□□□□ -1.53
LDB19YOR322C VBA2P38358 474 aaKnown RBP5.52□□□□□ -1.53
LDB19YOR322C YHL044WP38727 235 aa5.52□□□□□ -1.53
LDB19YOR322C HYR1P40581 163 aaKnown RBP5.52□□□□□ -1.53
LDB19YOR322C DPB11P47027 764 aaPredicted RBP5.52□□□□□ -1.53
LDB19YOR322C YJL045WP47052 634 aa5.52□□□□□ -1.53
LDB19YOR322C YPL067CQ02754 198 aa5.52□□□□□ -1.53
LDB19YOR322C SHH3Q04487 196 aa5.52□□□□□ -1.53
LDB19YOR322C GAS2Q06135 555 aa5.52□□□□□ -1.53
LDB19YOR322C ECM30Q06673 1274 aa5.52□□□□□ -1.53
LDB19YOR322C YFH1Q07540 174 aa5.52□□□□□ -1.53
LDB19YOR322C TY1A-GR1Q12085 440 aa5.52□□□□□ -1.53
LDB19YOR322C RMD5Q12508 421 aa5.52□□□□□ -1.53
LDB19YOR322C TY1A-PR3Q6Q5H1 440 aaKnown RBP5.52□□□□□ -1.53
LDB19YOR322C TY1A-OLQ92392 440 aaKnown RBP5.52□□□□□ -1.53
LDB19YOR322C PDR5P33302 1511 aaKnown RBP5.51□□□□□ -1.53
LDB19YOR322C ILV5P06168 395 aaKnown RBP5.51□□□□□ -1.53
LDB19YOR322C RPP1BP10622 106 aaKnown RBP5.51□□□□□ -1.53
LDB19YOR322C YCR023CP25351 611 aa5.51□□□□□ -1.53
LDB19YOR322C GAC1P28006 793 aa5.51□□□□□ -1.53
LDB19YOR322C TRR1P29509 319 aaKnown RBP5.51□□□□□ -1.53
LDB19YOR322C RAD23P32628 398 aaKnown RBP5.51□□□□□ -1.53
LDB19YOR322C YPC1P38298 316 aa5.51□□□□□ -1.53
LDB19YOR322C NSE4P43124 402 aa5.51□□□□□ -1.53
LDB19YOR322C LSB3P43603 459 aaKnown RBP5.51□□□□□ -1.53
LDB19YOR322C MNN10P50108 393 aaKnown RBP5.51□□□□□ -1.53
LDB19YOR322C INN1P53901 409 aa5.51□□□□□ -1.53
LDB19YOR322C YDR366CP87287 132 aa5.51□□□□□ -1.53
LDB19YOR322C STP1Q00947 519 aa5.51□□□□□ -1.53
LDB19YOR322C BTS1Q12051 335 aa5.51□□□□□ -1.53
LDB19YOR322C GRE2Q12068 342 aaKnown RBP5.51□□□□□ -1.53
LDB19YOR322C UPC2Q12151 913 aa5.51□□□□□ -1.53
LDB19YOR322C YOR111WQ99210 232 aa5.51□□□□□ -1.53
LDB19YOR322C PPH21P23594 369 aa5.51□□□□□ -1.53
LDB19YOR322C SUA7P29055 345 aaPredicted RBP5.51□□□□□ -1.53
LDB19YOR322C SSS1P35179 80 aa5.51□□□□□ -1.53
LDB19YOR322C YHR127WP38833 243 aaKnown RBP5.51□□□□□ -1.53
LDB19YOR322C SED5Q01590 340 aa5.51□□□□□ -1.53
LDB19YOR322C YMR253CQ04835 414 aa5.51□□□□□ -1.53
LDB19YOR322C DAL4Q04895 635 aa5.51□□□□□ -1.53
LDB19YOR322C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.51□□□□□ -1.53not detected
LDB19YOR322C YOR283WQ12040 230 aaKnown RBP5.51□□□□□ -1.53
LDB19YOR322C SPC3Q12133 184 aa5.51□□□□□ -1.53
LDB19YOR322C YIR021W-AQ3E739 70 aa5.51□□□□□ -1.53
LDB19YOR322C RPS21BQ3E754 87 aaKnown RBP5.51□□□□□ -1.53
LDB19YOR322C YBR126W-AQ8TGU7 68 aa5.51□□□□□ -1.53
LDB19YOR322C AI5_ALPHAQ9ZZX1 630 aa5.51□□□□□ -1.53
LDB19YOR322C SPO12P17123 173 aa5.5□□□□□ -1.53
LDB19YOR322C MBR1P23493 339 aa5.5□□□□□ -1.53
LDB19YOR322C COQ3P27680 312 aa5.5□□□□□ -1.53
LDB19YOR322C MRP20P32387 263 aa5.5□□□□□ -1.53
LDB19YOR322C REC104P33323 182 aa5.5□□□□□ -1.53
LDB19YOR322C MTC4P38335 694 aaKnown RBP5.5□□□□□ -1.53
LDB19YOR322C ARN1P38731 627 aa5.5□□□□□ -1.53
LDB19YOR322C YIL060WP40519 144 aa5.5□□□□□ -1.53
LDB19YOR322C IKS1P47042 667 aa5.5□□□□□ -1.53
LDB19YOR322C SNN1P48232 102 aa5.5□□□□□ -1.53
LDB19YOR322C TRM9P49957 279 aa5.5□□□□□ -1.53
LDB19YOR322C PHO23P50947 330 aa5.5□□□□□ -1.53
LDB19YOR322C BIO5P53744 561 aaKnown RBP5.5□□□□□ -1.53
LDB19YOR322C ADH6Q04894 360 aaKnown RBP5.5□□□□□ -1.53
LDB19YOR322C IPK1Q06667 281 aa5.5□□□□□ -1.53
LDB19YOR322C GPB1Q08886 897 aa5.5□□□□□ -1.53
LDB19YOR322C YPL260WQ08977 551 aa5.5□□□□□ -1.53
LDB19YOR322C NBP2Q12163 236 aa5.5□□□□□ -1.53
LDB19YOR322C DAL82P21705 255 aa5.5□□□□□ -1.53
LDB19YOR322C CDC50P25656 391 aa5.5□□□□□ -1.53
LDB19YOR322C RML2P32611 393 aa5.5□□□□□ -1.53
LDB19YOR322C SHE2P36068 246 aaKnown RBP RIP-Chip data5.5□□□□□ -1.53not detected
LDB19YOR322C YKL075CP36083 450 aa5.5□□□□□ -1.53
LDB19YOR322C GMH1P36125 273 aa5.5□□□□□ -1.53
LDB19YOR322C CHL4P38907 458 aa5.5□□□□□ -1.53
LDB19YOR322C EXO1P39875 702 aa5.5□□□□□ -1.53
LDB19YOR322C RRG9P40156 214 aa5.5□□□□□ -1.53
LDB19YOR322C GLR1P41921 483 aaKnown RBP5.5□□□□□ -1.53
LDB19YOR322C TAH11P47112 604 aa5.5□□□□□ -1.53
LDB19YOR322C COS10P52924 374 aa5.5□□□□□ -1.53
LDB19YOR322C YGL114WP53134 725 aa5.5□□□□□ -1.53
LDB19YOR322C IZH1Q03419 316 aa5.5□□□□□ -1.53
LDB19YOR322C RPC11Q04307 110 aaPredicted RBP5.5□□□□□ -1.53
LDB19YOR322C HOF1Q05080 669 aa5.5□□□□□ -1.53
LDB19YOR322C AIM6Q07716 390 aa5.5□□□□□ -1.53
LDB19YOR322C ENT4Q07872 247 aa5.5□□□□□ -1.53
LDB19YOR322C RDI1Q12434 202 aa5.5□□□□□ -1.53
LDB19YOR322C VAR1P02381 398 aa5.49□□□□□ -1.53
LDB19YOR322C RPS28BP0C0X0 67 aaKnown RBP5.49□□□□□ -1.53
LDB19YOR322C CPR1P14832 162 aaKnown RBP5.49□□□□□ -1.53
LDB19YOR322C PCL1P24867 279 aa5.49□□□□□ -1.53
LDB19YOR322C SYN8P31377 255 aa5.49□□□□□ -1.53
LDB19YOR322C FRE1P32791 686 aa5.49□□□□□ -1.53
LDB19YOR322C KTI12P34253 313 aaKnown RBP5.49□□□□□ -1.53
LDB19YOR322C YKR041WP36134 250 aa5.49□□□□□ -1.53
LDB19YOR322C ECM21P38167 1117 aaKnown RBP5.49□□□□□ -1.53
LDB19YOR322C TRS20P38334 175 aa5.49□□□□□ -1.53
LDB19YOR322C IKI1P38874 309 aa5.49□□□□□ -1.53
LDB19YOR322C SNU13P39990 126 aaKnown RBP5.49□□□□□ -1.53
LDB19YOR322C PSF2P40359 213 aa5.49□□□□□ -1.53
LDB19YOR322C MOB1P40484 314 aa5.49□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 50.6 ms