RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeastyeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUB1YNL016W UFE1P41834 346 aa3.55□□□□□ -1.84
PUB1YNL016W YGR210CP42942 411 aa3.55□□□□□ -1.84
PUB1YNL016W RTT101P47050 842 aa3.55□□□□□ -1.84
PUB1YNL016W HOC1P47124 396 aa3.55□□□□□ -1.84
PUB1YNL016W HMS2P47175 358 aa3.55□□□□□ -1.84
PUB1YNL016W COQ5P49017 307 aa3.55□□□□□ -1.84
PUB1YNL016W PCP1P53259 346 aa3.55□□□□□ -1.84
PUB1YNL016W GPI1P53306 609 aa3.55□□□□□ -1.84
PUB1YNL016W NOP19P53317 196 aaPredicted RBP3.55□□□□□ -1.84
PUB1YNL016W YNL181WP53878 407 aa3.55□□□□□ -1.84
PUB1YNL016W TIM8P57744 87 aa3.55□□□□□ -1.84
PUB1YNL016W SED5Q01590 340 aa3.55□□□□□ -1.84
PUB1YNL016W RNT1Q02555 471 aa3.55□□□□□ -1.84
PUB1YNL016W PIR3Q03180 325 aa3.55□□□□□ -1.84
PUB1YNL016W OST6Q03723 332 aa3.55□□□□□ -1.84
PUB1YNL016W MSS11Q03825 758 aa3.55□□□□□ -1.84
PUB1YNL016W ATG17Q06410 417 aa3.55□□□□□ -1.84
PUB1YNL016W DDC1Q08949 612 aa3.55□□□□□ -1.84
PUB1YNL016W CSM4Q08955 156 aa3.55□□□□□ -1.84
PUB1YNL016W SNF8Q12483 233 aa3.55□□□□□ -1.84
PUB1YNL016W YOR338WQ99326 363 aa3.55□□□□□ -1.84
PUB1YNL016W AI5_BETAQ9ZZX0 354 aa3.55□□□□□ -1.84
PUB1YNL016W HFA1P32874 2273 aa3.55□□□□□ -1.84
PUB1YNL016W QCR7P00128 127 aa3.54□□□□□ -1.84
PUB1YNL016W GAL4P04386 881 aa3.54□□□□□ -1.84
PUB1YNL016W SPO12P17123 173 aa3.54□□□□□ -1.84
PUB1YNL016W IES6P32617 166 aa3.54□□□□□ -1.84
PUB1YNL016W SGE1P33335 543 aa3.54□□□□□ -1.84
PUB1YNL016W RSM22P36056 628 aa3.54□□□□□ -1.84
PUB1YNL016W SWD2P36104 329 aaPredicted RBP3.54□□□□□ -1.84
PUB1YNL016W ECM13P38195 257 aa3.54□□□□□ -1.84
PUB1YNL016W PRS2P38620 318 aaKnown RBP3.54□□□□□ -1.84
PUB1YNL016W RCK2P38623 610 aa3.54□□□□□ -1.84
PUB1YNL016W YNL194CP40169 301 aa3.54□□□□□ -1.84
PUB1YNL016W TMA22P47089 198 aaPredicted RBP3.54□□□□□ -1.84
PUB1YNL016W TIS11P47977 285 aa3.54□□□□□ -1.84
PUB1YNL016W YPT11P48559 417 aa3.54□□□□□ -1.84
PUB1YNL016W LSG1P53145 640 aaKnown RBP3.54□□□□□ -1.84
PUB1YNL016W GET1P53192 235 aa3.54□□□□□ -1.84
PUB1YNL016W LST7P53237 242 aa3.54□□□□□ -1.84
PUB1YNL016W MZM1Q03429 123 aaPredicted RBP3.54□□□□□ -1.84
PUB1YNL016W FAR8Q05040 523 aa3.54□□□□□ -1.84
PUB1YNL016W SGT1Q08446 395 aa3.54□□□□□ -1.84
PUB1YNL016W PNS1Q12412 539 aa3.54□□□□□ -1.84
PUB1YNL016W YIL046W-AQ3E7Z4 54 aa3.54□□□□□ -1.84
PUB1YNL016W HIS1P00498 297 aaKnown RBP3.53□□□□□ -1.84
PUB1YNL016W SNF6P18888 332 aa3.53□□□□□ -1.84
PUB1YNL016W YMR31P19955 123 aa3.53□□□□□ -1.84
PUB1YNL016W LSB5P25369 354 aa3.53□□□□□ -1.84
PUB1YNL016W NDC1P32500 655 aa3.53□□□□□ -1.84
PUB1YNL016W SPS19P32573 292 aaKnown RBP3.53□□□□□ -1.84
PUB1YNL016W COX13P32799 129 aa3.53□□□□□ -1.84
PUB1YNL016W AST1P35183 429 aa3.53□□□□□ -1.84
PUB1YNL016W FLO10P36170 1169 aa3.53□□□□□ -1.84
PUB1YNL016W DTR1P38125 572 aa3.53□□□□□ -1.84
PUB1YNL016W RIM2P38127 377 aa3.53□□□□□ -1.84
PUB1YNL016W ARN1P38731 627 aa3.53□□□□□ -1.84
PUB1YNL016W LYS1P38998 373 aaRIP-Chip data3.53□□□□□ -1.84not detected
PUB1YNL016W EXO1P39875 702 aa3.53□□□□□ -1.84
PUB1YNL016W ISC1P40015 477 aaKnown RBP3.53□□□□□ -1.84
PUB1YNL016W THO1P40040 218 aaKnown RBP3.53□□□□□ -1.84
PUB1YNL016W IMD3P50095 523 aaKnown RBP3.53□□□□□ -1.84
PUB1YNL016W SSU72P53538 206 aaPredicted RBP3.53□□□□□ -1.84
PUB1YNL016W NRM1P53718 249 aa3.53□□□□□ -1.84
PUB1YNL016W YPL077CQ02831 240 aa3.53□□□□□ -1.84
PUB1YNL016W VBA1Q04301 562 aa3.53□□□□□ -1.84
PUB1YNL016W SWF1Q04629 336 aa3.53□□□□□ -1.84
PUB1YNL016W VPS74Q06385 345 aa3.53□□□□□ -1.84
PUB1YNL016W PBP4Q07362 185 aaKnown RBP3.53□□□□□ -1.84
PUB1YNL016W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
PUB1YNL016W YBR056W-AI2HB52 66 aa3.52□□□□□ -1.85
PUB1YNL016W HTB1P02293 131 aaKnown RBP3.52□□□□□ -1.85
PUB1YNL016W HTB2P02294 131 aa3.52□□□□□ -1.85
PUB1YNL016W PAB1P04147 577 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85not detected
PUB1YNL016W DPB2P24482 689 aaPredicted RBP3.52□□□□□ -1.85
PUB1YNL016W SSO1P32867 290 aa3.52□□□□□ -1.85
PUB1YNL016W MRPL6P32904 214 aa3.52□□□□□ -1.85
PUB1YNL016W PPZ2P33329 710 aa3.52□□□□□ -1.85
PUB1YNL016W SPO23P33757 523 aa3.52□□□□□ -1.85
PUB1YNL016W FES1P38260 290 aa3.52□□□□□ -1.85
PUB1YNL016W YCH1P42937 148 aa3.52□□□□□ -1.85
PUB1YNL016W PHB2P50085 310 aa3.52□□□□□ -1.85
PUB1YNL016W YIP1P53039 248 aa3.52□□□□□ -1.85
PUB1YNL016W SUN4P53616 420 aa3.52□□□□□ -1.85
PUB1YNL016W ZRG17P53735 605 aa3.52□□□□□ -1.85
PUB1YNL016W YPL080CQ02826 108 aa3.52□□□□□ -1.85
PUB1YNL016W YMR206WQ03695 313 aa3.52□□□□□ -1.85
PUB1YNL016W ARP10Q04549 284 aa3.52□□□□□ -1.85
PUB1YNL016W SSK1Q07084 712 aa3.52□□□□□ -1.85
PUB1YNL016W NDE2Q07500 545 aa3.52□□□□□ -1.85
PUB1YNL016W NDD1Q08887 554 aa3.52□□□□□ -1.85
PUB1YNL016W YOR389WQ08912 624 aa3.52□□□□□ -1.85
PUB1YNL016W GRE1Q08969 168 aa3.52□□□□□ -1.85
PUB1YNL016W RGT2Q12300 763 aa3.52□□□□□ -1.85
PUB1YNL016W YOP1Q12402 180 aa3.52□□□□□ -1.85
PUB1YNL016W YDR157WA0A023PZE8 133 aa3.51□□□□□ -1.85
PUB1YNL016W NAM2P11325 894 aa3.51□□□□□ -1.85
PUB1YNL016W FBA1P14540 359 aaKnown RBP3.51□□□□□ -1.85
PUB1YNL016W CMK2P22517 447 aa3.51□□□□□ -1.85
PUB1YNL016W RNA15P25299 296 aaPredicted RBP3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms