RNA–Protein interactions for RNA: YMR200W

ROT1, Transcript of Molecular chaperone involved in protein folding in ER, yeastyeast

Gene ROT1, Length 771 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT1YMR200W RPL20BP0CX24 172 aaPredicted RBP4.27□□□□□ -1.73
ROT1YMR200W CAP2P13517 287 aa4.27□□□□□ -1.73
ROT1YMR200W MTF1P14908 341 aaKnown RBP4.27□□□□□ -1.73
ROT1YMR200W EXG1P23776 448 aaKnown RBP4.27□□□□□ -1.73
ROT1YMR200W CDC10P25342 322 aaKnown RBP4.27□□□□□ -1.73
ROT1YMR200W EHD3P28817 500 aa4.27□□□□□ -1.73
ROT1YMR200W QRI5P32344 111 aa4.27□□□□□ -1.73
ROT1YMR200W KAR9P32526 644 aa4.27□□□□□ -1.73
ROT1YMR200W SRP102P36057 244 aaPredicted RBP4.27□□□□□ -1.73
ROT1YMR200W DRE2P36152 348 aa4.27□□□□□ -1.73
ROT1YMR200W RIB5P38145 238 aa4.27□□□□□ -1.73
ROT1YMR200W MET30P39014 640 aa4.27□□□□□ -1.73
ROT1YMR200W SOK1P40317 901 aa4.27□□□□□ -1.73
ROT1YMR200W YIL169CP40442 995 aa4.27□□□□□ -1.73
ROT1YMR200W ICE2P40499 491 aa4.27□□□□□ -1.73
ROT1YMR200W WWM1P43582 211 aaKnown RBP4.27□□□□□ -1.73
ROT1YMR200W MIC26P50087 233 aa4.27□□□□□ -1.73
ROT1YMR200W CDH1P53197 566 aa4.27□□□□□ -1.73
ROT1YMR200W YNL140CP53910 189 aa4.27□□□□□ -1.73
ROT1YMR200W ASI3P53983 676 aa4.27□□□□□ -1.73
ROT1YMR200W MHR1Q06630 226 aa4.27□□□□□ -1.73
ROT1YMR200W PFA4Q12006 378 aa4.27□□□□□ -1.73
ROT1YMR200W RIO1Q12196 484 aaKnown RBP4.27□□□□□ -1.73
ROT1YMR200W RRP42Q12277 265 aaPredicted RBP4.27□□□□□ -1.73
ROT1YMR200W UTP23Q12339 254 aaKnown RBP4.27□□□□□ -1.73
ROT1YMR200W WTM1Q12363 437 aaKnown RBP4.27□□□□□ -1.73
ROT1YMR200W DCN1Q12395 269 aa4.27□□□□□ -1.73
ROT1YMR200W TFS1P14306 219 aa4.26□□□□□ -1.73
ROT1YMR200W GIT1P25346 518 aa4.26□□□□□ -1.73
ROT1YMR200W CHA1P25379 360 aaKnown RBP4.26□□□□□ -1.73
ROT1YMR200W CPR3P25719 182 aa4.26□□□□□ -1.73
ROT1YMR200W TIP1P27654 210 aaPredicted RBP4.26□□□□□ -1.73
ROT1YMR200W DEP1P31385 405 aa4.26□□□□□ -1.73
ROT1YMR200W VPH2P32341 215 aa4.26□□□□□ -1.73
ROT1YMR200W ECM8P38246 354 aa4.26□□□□□ -1.73
ROT1YMR200W SDS24P38314 527 aa4.26□□□□□ -1.73
ROT1YMR200W GIM4P40005 111 aaKnown RBP4.26□□□□□ -1.73
ROT1YMR200W CSM2P40465 213 aa4.26□□□□□ -1.73
ROT1YMR200W DFG10P40526 253 aa4.26□□□□□ -1.73
ROT1YMR200W AGE2P40529 298 aa4.26□□□□□ -1.73
ROT1YMR200W MEP2P41948 499 aa4.26□□□□□ -1.73
ROT1YMR200W IRC7P43623 340 aa4.26□□□□□ -1.73
ROT1YMR200W CIN2P46670 268 aa4.26□□□□□ -1.73
ROT1YMR200W YJR141WP47172 347 aaPredicted RBP4.26□□□□□ -1.73
ROT1YMR200W ALG13P53178 202 aa4.26□□□□□ -1.73
ROT1YMR200W MAL13P53338 473 aa4.26□□□□□ -1.73
ROT1YMR200W CCE1Q03702 353 aa4.26□□□□□ -1.73
ROT1YMR200W YMR114CQ04471 368 aaKnown RBP4.26□□□□□ -1.73
ROT1YMR200W SFH1Q06168 426 aa4.26□□□□□ -1.73
ROT1YMR200W TIM18Q08749 192 aa4.26□□□□□ -1.73
ROT1YMR200W YOR114WQ12219 294 aa4.26□□□□□ -1.73
ROT1YMR200W YCT1Q12235 531 aa4.26□□□□□ -1.73
ROT1YMR200W HOM6P31116 359 aaKnown RBP4.25□□□□□ -1.73
ROT1YMR200W RAD5P32849 1169 aaPredicted RBP4.25□□□□□ -1.73
ROT1YMR200W CHK1P38147 527 aa4.25□□□□□ -1.73
ROT1YMR200W YPC1P38298 316 aa4.25□□□□□ -1.73
ROT1YMR200W DHH1P39517 506 aaKnown RBP4.25□□□□□ -1.73
ROT1YMR200W TES1P41903 349 aaKnown RBP4.25□□□□□ -1.73
ROT1YMR200W PMT4P46971 762 aa4.25□□□□□ -1.73
ROT1YMR200W PRP24P49960 444 aaKnown RBP4.25□□□□□ -1.73
ROT1YMR200W PEX31P53203 462 aa4.25□□□□□ -1.73
ROT1YMR200W YNL234WP53857 426 aa4.25□□□□□ -1.73
ROT1YMR200W IBD2P53892 351 aa4.25□□□□□ -1.73
ROT1YMR200W PRP38Q00723 242 aaPredicted RBP4.25□□□□□ -1.73
ROT1YMR200W IRC15Q02733 499 aa4.25□□□□□ -1.73
ROT1YMR200W ODC1Q03028 310 aa4.25□□□□□ -1.73
ROT1YMR200W BNA5Q05979 453 aa4.25□□□□□ -1.73
ROT1YMR200W MRPL51Q06090 140 aaPredicted RBP4.25□□□□□ -1.73
ROT1YMR200W HEM25Q07534 307 aa4.25□□□□□ -1.73
ROT1YMR200W YLR012CQ07927 99 aa4.25□□□□□ -1.73
ROT1YMR200W THI20Q08224 551 aa4.25□□□□□ -1.73
ROT1YMR200W MUM3Q08750 479 aa4.25□□□□□ -1.73
ROT1YMR200W DDC1Q08949 612 aa4.25□□□□□ -1.73
ROT1YMR200W YDL009CQ12210 107 aa4.25□□□□□ -1.73
ROT1YMR200W SNU23Q12368 194 aaPredicted RBP4.25□□□□□ -1.73
ROT1YMR200W YPR064WQ12492 139 aa4.25□□□□□ -1.73
ROT1YMR200W ARP6Q12509 438 aa4.25□□□□□ -1.73
ROT1YMR200W PET494P07390 489 aaPredicted RBP4.24□□□□□ -1.73
ROT1YMR200W ZWF1P11412 505 aaKnown RBP4.24□□□□□ -1.73
ROT1YMR200W SEN2P16658 377 aa4.24□□□□□ -1.73
ROT1YMR200W SLY1P22213 666 aa4.24□□□□□ -1.73
ROT1YMR200W COQ3P27680 312 aa4.24□□□□□ -1.73
ROT1YMR200W TRR1P29509 319 aaKnown RBP4.24□□□□□ -1.73
ROT1YMR200W SPT4P32914 102 aaPredicted RBP4.24□□□□□ -1.73
ROT1YMR200W SHG1P38337 142 aa4.24□□□□□ -1.73
ROT1YMR200W NDT80P38830 627 aa4.24□□□□□ -1.73
ROT1YMR200W JLP2P40206 208 aa4.24□□□□□ -1.73
ROT1YMR200W YNL320WP42840 284 aa4.24□□□□□ -1.73
ROT1YMR200W SFH5P47008 294 aa4.24□□□□□ -1.73
ROT1YMR200W GTR2P53290 341 aa4.24□□□□□ -1.73
ROT1YMR200W YNL040WP53960 456 aaPredicted RBP4.24□□□□□ -1.73
ROT1YMR200W YLR460CP54007 376 aa4.24□□□□□ -1.73
ROT1YMR200W DIG1Q03063 452 aaKnown RBP4.24□□□□□ -1.73
ROT1YMR200W SNO1Q03144 224 aa4.24□□□□□ -1.73
ROT1YMR200W YPL150WQ12152 901 aa4.24□□□□□ -1.73
ROT1YMR200W SME1Q12330 94 aaPredicted RBP4.24□□□□□ -1.73
ROT1YMR200W PET20Q99373 253 aa4.24□□□□□ -1.73
ROT1YMR200W SIR4P11978 1358 aa4.24□□□□□ -1.73
ROT1YMR200W SPS100P13130 326 aa4.23□□□□□ -1.73
ROT1YMR200W URA6P15700 204 aa4.23□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 28.2 ms