RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeastyeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFG2YLR397C HOM6P31116 359 aaKnown RBP6.81□□□□□ -1.32
AFG2YLR397C CDC5P32562 705 aa6.81□□□□□ -1.32
AFG2YLR397C RCR1P38212 213 aa6.81□□□□□ -1.32
AFG2YLR397C YHR210CP38893 341 aa6.81□□□□□ -1.32
AFG2YLR397C IBA57P47158 497 aa6.81□□□□□ -1.32
AFG2YLR397C FMP41P53889 259 aaKnown RBP6.81□□□□□ -1.32
AFG2YLR397C OAZ1Q02803 292 aa6.81□□□□□ -1.32
AFG2YLR397C TMN2Q04562 672 aa6.81□□□□□ -1.32
AFG2YLR397C NUS1Q12063 375 aa6.81□□□□□ -1.32
AFG2YLR397C TPO4Q12256 659 aa6.81□□□□□ -1.32
AFG2YLR397C AHA1Q12449 350 aaKnown RBP6.81□□□□□ -1.32
AFG2YLR397C RMD5Q12508 421 aa6.81□□□□□ -1.32
AFG2YLR397C YPL247CQ12523 523 aa6.81□□□□□ -1.32
AFG2YLR397C RPS25AQ3E792 108 aaPredicted RBP6.81□□□□□ -1.32
AFG2YLR397C YEL009C-AA0A023PZF2 135 aa6.81□□□□□ -1.32
AFG2YLR397C YOR304C-AO14468 76 aa6.81□□□□□ -1.32
AFG2YLR397C MDH1P17505 334 aaKnown RBP RIP-Chip data6.81□□□□□ -1.32not detected
AFG2YLR397C SEC22P22214 214 aa6.81□□□□□ -1.32
AFG2YLR397C YCR015CP25616 317 aa6.81□□□□□ -1.32
AFG2YLR397C YPC1P38298 316 aa6.81□□□□□ -1.32
AFG2YLR397C CHA4P43634 648 aa6.81□□□□□ -1.32
AFG2YLR397C NCS6P53088 359 aa6.81□□□□□ -1.32
AFG2YLR397C GPI15P53961 229 aa6.81□□□□□ -1.32
AFG2YLR397C LSM3P57743 89 aaKnown RBP6.81□□□□□ -1.32
AFG2YLR397C EKI1Q03764 534 aa6.81□□□□□ -1.32
AFG2YLR397C SPC19Q03954 165 aa6.81□□□□□ -1.32
AFG2YLR397C SPR28Q04921 423 aa6.81□□□□□ -1.32
AFG2YLR397C YML053CQ04978 212 aa6.81□□□□□ -1.32
AFG2YLR397C THP1Q08231 455 aa6.81□□□□□ -1.32
AFG2YLR397C SLO1Q3E784 85 aa6.81□□□□□ -1.32
AFG2YLR397C CAN1P04817 590 aa6.8□□□□□ -1.32
AFG2YLR397C GCY1P14065 312 aaKnown RBP RIP-Chip data6.8□□□□□ -1.32not detected
AFG2YLR397C SAM2P19358 384 aaKnown RBP6.8□□□□□ -1.32
AFG2YLR397C URA10P30402 227 aa6.8□□□□□ -1.32
AFG2YLR397C FLR1P38124 548 aa6.8□□□□□ -1.32
AFG2YLR397C ARP1P38696 384 aa6.8□□□□□ -1.32
AFG2YLR397C YER158CP40095 573 aa6.8□□□□□ -1.32
AFG2YLR397C YJR149WP47177 404 aa6.8□□□□□ -1.32
AFG2YLR397C OST3P48439 350 aa6.8□□□□□ -1.32
AFG2YLR397C TRM9P49957 279 aa6.8□□□□□ -1.32
AFG2YLR397C DIA3P52290 468 aa6.8□□□□□ -1.32
AFG2YLR397C SDT1P53078 280 aa6.8□□□□□ -1.32
AFG2YLR397C DUS1P53759 423 aaKnown RBP6.8□□□□□ -1.32
AFG2YLR397C YNL181WP53878 407 aa6.8□□□□□ -1.32
AFG2YLR397C YNL018CP53976 612 aa6.8□□□□□ -1.32
AFG2YLR397C YDR415CQ04033 374 aaPredicted RBP6.8□□□□□ -1.32
AFG2YLR397C YOL131WQ08270 108 aa6.8□□□□□ -1.32
AFG2YLR397C BSC6Q08280 497 aa6.8□□□□□ -1.32
AFG2YLR397C NBP2Q12163 236 aa6.8□□□□□ -1.32
AFG2YLR397C SGA1P08019 549 aa6.79□□□□□ -1.32
AFG2YLR397C HOG1P32485 435 aa6.79□□□□□ -1.32
AFG2YLR397C UTR2P32623 467 aa6.79□□□□□ -1.32
AFG2YLR397C YUH1P35127 236 aa6.79□□□□□ -1.32
AFG2YLR397C LSM2P38203 95 aaKnown RBP6.79□□□□□ -1.32
AFG2YLR397C TRS20P38334 175 aa6.79□□□□□ -1.32
AFG2YLR397C FLX1P40464 311 aa6.79□□□□□ -1.32
AFG2YLR397C RIB4P50861 169 aaPredicted RBP6.79□□□□□ -1.32
AFG2YLR397C BRE5P53741 515 aaKnown RBP6.79□□□□□ -1.32
AFG2YLR397C TIM8P57744 87 aa6.79□□□□□ -1.32
AFG2YLR397C YML096WQ04489 525 aa6.79□□□□□ -1.32
AFG2YLR397C PUS5Q06244 254 aa6.79□□□□□ -1.32
AFG2YLR397C WTM1Q12363 437 aaKnown RBP6.79□□□□□ -1.32
AFG2YLR397C MHF2Q3E829 80 aa6.79□□□□□ -1.32
AFG2YLR397C COX5BP00425 151 aa6.79□□□□□ -1.32
AFG2YLR397C ATP5P09457 212 aa6.79□□□□□ -1.32
AFG2YLR397C UGX2P32772 223 aa6.79□□□□□ -1.32
AFG2YLR397C YPT53P36019 220 aa6.79□□□□□ -1.32
AFG2YLR397C RPF1P38805 295 aaKnown RBP6.79□□□□□ -1.32
AFG2YLR397C GCV3P39726 170 aaPredicted RBP6.79□□□□□ -1.32
AFG2YLR397C IME4P41833 600 aa6.79□□□□□ -1.32
AFG2YLR397C HMS2P47175 358 aa6.79□□□□□ -1.32
AFG2YLR397C ACT1P60010 375 aaKnown RBP6.79□□□□□ -1.32
AFG2YLR397C SPP2Q02521 185 aa6.79□□□□□ -1.32
AFG2YLR397C CSM4Q08955 156 aa6.79□□□□□ -1.32
AFG2YLR397C GRE1Q08969 168 aa6.79□□□□□ -1.32
AFG2YLR397C YDL085C-AQ3E7B7 68 aaKnown RBP6.79□□□□□ -1.32
AFG2YLR397C HAP3P13434 144 aa6.78□□□□□ -1.32
AFG2YLR397C AMD1P15274 810 aaKnown RBP6.78□□□□□ -1.32
AFG2YLR397C ASC1P38011 319 aaKnown RBP6.78□□□□□ -1.32
AFG2YLR397C TAT1P38085 619 aa6.78□□□□□ -1.32
AFG2YLR397C VPS52P39904 641 aa6.78□□□□□ -1.32
AFG2YLR397C SYS1P41544 203 aa6.78□□□□□ -1.32
AFG2YLR397C GDS1P41913 522 aa6.78□□□□□ -1.32
AFG2YLR397C ULI1P43604 169 aa6.78□□□□□ -1.32
AFG2YLR397C SKO1Q02100 647 aa6.78□□□□□ -1.32
AFG2YLR397C CSM3Q04659 317 aa6.78□□□□□ -1.32
AFG2YLR397C CRF1Q04930 467 aa6.78□□□□□ -1.32
AFG2YLR397C RRP45Q05636 305 aaKnown RBP6.78□□□□□ -1.32
AFG2YLR397C THI7Q05998 598 aa6.78□□□□□ -1.32
AFG2YLR397C GPB1Q08886 897 aa6.78□□□□□ -1.32
AFG2YLR397C STF1P01098 86 aa6.78□□□□□ -1.32
AFG2YLR397C CDC4P07834 779 aa6.78□□□□□ -1.32
AFG2YLR397C TIP1P27654 210 aaPredicted RBP6.78□□□□□ -1.32
AFG2YLR397C CWP1P28319 239 aa6.78□□□□□ -1.32
AFG2YLR397C STE14P32584 239 aa6.78□□□□□ -1.32
AFG2YLR397C GLC7P32598 312 aaKnown RBP6.78□□□□□ -1.32
AFG2YLR397C SHE2P36068 246 aaKnown RBP RIP-Chip data6.78□□□□□ -1.32not detected
AFG2YLR397C YJL163CP46996 555 aa6.78□□□□□ -1.32
AFG2YLR397C BUD9P53226 547 aa6.78□□□□□ -1.32
AFG2YLR397C IRC15Q02733 499 aa6.78□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 45 ms