Protein–RNA interactions for Protein: P38203

LSM2, U6 snRNA-associated Sm-like protein LSm2, yeastyeast

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM2P38203 NSR1YGR159C 1245 nt16.02■□□□□ 0.16
LSM2P38203 YML009W-BYML009W-B 477 nt15.83■□□□□ 0.12
LSM2P38203 NOP1YDL014W 984 nt15.25■□□□□ 0.03
LSM2P38203 MDJ1YFL016C 1536 nt14.52□□□□□ -0.08
LSM2P38203 YKL036CYKL036C 393 nt13.8□□□□□ -0.2
LSM2P38203 SRX1YKL086W 384 nt13.36□□□□□ -0.27
LSM2P38203 YJL027CYJL027C 417 nt13.35□□□□□ -0.27
LSM2P38203 Q0297Q0297 156 nt13.29□□□□□ -0.28
LSM2P38203 DBP2YNL112W 1641 nt12.77□□□□□ -0.37
LSM2P38203 SSA3YBL075C 1950 nt12.72□□□□□ -0.37
LSM2P38203 YCR051WYCR051W 669 nt12.62□□□□□ -0.39
LSM2P38203 YBR190WYBR190W 312 nt12.46□□□□□ -0.41
LSM2P38203 SCS3YGL126W 1143 nt12.42□□□□□ -0.42
LSM2P38203 TRN1tP(UGG)A 72 nt12.28□□□□□ -0.44
LSM2P38203 SUF9tP(UGG)F 72 nt12.28□□□□□ -0.44
LSM2P38203 SUF8tP(UGG)H 72 nt12.28□□□□□ -0.44
LSM2P38203 tP(UGG)LtP(UGG)L 72 nt12.28□□□□□ -0.44
LSM2P38203 SUF7tP(UGG)M 72 nt12.28□□□□□ -0.44
LSM2P38203 tP(UGG)N1tP(UGG)N1 72 nt12.28□□□□□ -0.44
LSM2P38203 tP(UGG)N2tP(UGG)N2 72 nt12.28□□□□□ -0.44
LSM2P38203 tP(UGG)O1tP(UGG)O1 72 nt12.28□□□□□ -0.44
LSM2P38203 SUF11tP(UGG)O2 72 nt12.28□□□□□ -0.44
LSM2P38203 RTC3YHR087W 336 nt12.13□□□□□ -0.47
LSM2P38203 CCC1YLR220W 969 nt12.1□□□□□ -0.47
LSM2P38203 YOL085CYOL085C 342 nt11.98□□□□□ -0.49
LSM2P38203 RPP1BYDL130W 321 nt11.91□□□□□ -0.5
LSM2P38203 RVS167YDR388W 1449 nt11.86□□□□□ -0.51
LSM2P38203 PKP1YIL042C 1185 nt11.82□□□□□ -0.52
LSM2P38203 SCJ1YMR214W 1134 nt11.8□□□□□ -0.52
LSM2P38203 PUT4YOR348C 1884 nt11.58□□□□□ -0.56
LSM2P38203 tP(UGG)O3tP(UGG)O3 72 nt11.5□□□□□ -0.57
LSM2P38203 PET122YER153C 765 nt11.42□□□□□ -0.58
LSM2P38203 SHR5YOL110W 714 nt11.4□□□□□ -0.58
LSM2P38203 ARE1YCR048W 1833 nt11.28□□□□□ -0.6
LSM2P38203 URN1YPR152C 1398 nt11.27□□□□□ -0.61
LSM2P38203 OPI9YLR338W 858 nt11.19□□□□□ -0.62
LSM2P38203 SAH1YER043C 1350 nt11.18□□□□□ -0.62
LSM2P38203 SCR1SCR1 522 nt11.18□□□□□ -0.62
LSM2P38203 DEP1YAL013W 1218 nt11.16□□□□□ -0.62
LSM2P38203 POA1YBR022W 534 nt11.16□□□□□ -0.62
LSM2P38203 YDJ1YNL064C 1230 nt11.13□□□□□ -0.63
LSM2P38203 YHR049C-AYHR049C-A 297 nt11.11□□□□□ -0.63
LSM2P38203 RRN5YLR141W 1092 nt11.05□□□□□ -0.64
LSM2P38203 RPN10YHR200W 807 nt11.01□□□□□ -0.65
LSM2P38203 ATS1YAL020C 1002 nt11.01□□□□□ -0.65
LSM2P38203 BSC6YOL137W 1494 nt11□□□□□ -0.65
LSM2P38203 YNL208WYNL208W 600 nt10.96□□□□□ -0.65
LSM2P38203 GAR1YHR089C 618 nt10.91□□□□□ -0.66
LSM2P38203 SSA4YER103W 1929 nt10.84□□□□□ -0.67
LSM2P38203 YER088W-BYER088W-B 147 nt10.84□□□□□ -0.67
LSM2P38203 PUN1YLR414C 792 nt10.84□□□□□ -0.67
LSM2P38203 BUD23YCR047C 828 nt10.8□□□□□ -0.68
LSM2P38203 SPT5YML010W 3192 nt10.8□□□□□ -0.68
LSM2P38203 PTC2YER089C 1395 nt10.76□□□□□ -0.69
LSM2P38203 YJR018WYJR018W 363 nt10.73□□□□□ -0.69
LSM2P38203 PAC11YDR488C 1602 nt10.73□□□□□ -0.69
LSM2P38203 RSB1YOR049C 1065 nt10.71□□□□□ -0.69
LSM2P38203 NVJ2YPR091C 2313 nt10.68□□□□□ -0.7
LSM2P38203 NAB2YGL122C 1578 nt10.67□□□□□ -0.7
LSM2P38203 BDF1YLR399C 2061 nt10.61□□□□□ -0.71
LSM2P38203 TIR1YER011W 765 nt10.57□□□□□ -0.72
LSM2P38203 YJR120WYJR120W 351 nt10.55□□□□□ -0.72
LSM2P38203 SSA1YAL005C 1929 nt10.52□□□□□ -0.72
LSM2P38203 FIS1YIL065C 468 nt10.52□□□□□ -0.73
LSM2P38203 DAL1YIR027C 1383 nt10.48□□□□□ -0.73
LSM2P38203 TAT1YBR069C 1860 nt10.44□□□□□ -0.74
LSM2P38203 RPP2BYDR382W 333 nt10.4□□□□□ -0.74
LSM2P38203 FPR4YLR449W 1179 nt10.39□□□□□ -0.75
LSM2P38203 YJL225CYJL225C 5277 nt10.39□□□□□ -0.75
LSM2P38203 INM2YDR287W 879 nt10.38□□□□□ -0.75
LSM2P38203 PHO4YFR034C 939 nt10.38□□□□□ -0.75
LSM2P38203 MEP2YNL142W 1500 nt10.36□□□□□ -0.75
LSM2P38203 FPS1YLL043W 2010 nt10.34□□□□□ -0.75
LSM2P38203 SRB2YHR041C 633 nt10.32□□□□□ -0.76
LSM2P38203 YPS1YLR120C 1710 nt10.3□□□□□ -0.76
LSM2P38203 PST2YDR032C 597 nt10.27□□□□□ -0.77
LSM2P38203 YBL100CYBL100C 315 nt10.23□□□□□ -0.77
LSM2P38203 DCW1YKL046C 1350 nt10.19□□□□□ -0.78
LSM2P38203 YDR095CYDR095C 411 nt10.19□□□□□ -0.78
LSM2P38203 BDH2YAL061W 1254 nt10.18□□□□□ -0.78
LSM2P38203 RDN37-1RDN37-1 5354 nt10.17□□□□□ -0.78
LSM2P38203 RDN37-2RDN37-2 5354 nt10.17□□□□□ -0.78
LSM2P38203 YHR165W-AYHR165W-A 312 nt10.16□□□□□ -0.78
LSM2P38203 FUN26YAL022C 1554 nt10.11□□□□□ -0.79
LSM2P38203 WWM1YFL010C 636 nt10.05□□□□□ -0.8
LSM2P38203 EMI2YDR516C 1503 nt10.05□□□□□ -0.8
LSM2P38203 PTP1YDL230W 1008 nt10.01□□□□□ -0.81
LSM2P38203 TRM9YML014W 840 nt10.01□□□□□ -0.81
LSM2P38203 LSM3YLR438C-A 270 nt9.99□□□□□ -0.81
LSM2P38203 ALF1YNL148C 765 nt9.99□□□□□ -0.81
LSM2P38203 RPP2AYOL039W 321 nt9.98□□□□□ -0.81
LSM2P38203 YBR220CYBR220C 1683 nt9.97□□□□□ -0.81
LSM2P38203 CAC2YML102W 1407 nt9.97□□□□□ -0.81
LSM2P38203 CCT6YDR188W 1641 nt9.96□□□□□ -0.81
LSM2P38203 YMR090WYMR090W 684 nt9.96□□□□□ -0.82
LSM2P38203 YDL221WYDL221W 552 nt9.95□□□□□ -0.82
LSM2P38203 SHU1YHL006C 453 nt9.92□□□□□ -0.82
LSM2P38203 YFL021C-AYFL021C-A 855 nt9.9□□□□□ -0.82
LSM2P38203 SIS1YNL007C 1059 nt9.9□□□□□ -0.82
LSM2P38203 SDH1YKL148C 1923 nt9.9□□□□□ -0.83
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms