RNA–Protein interactions for RNA: YLR197W

NOP56, Transcript of Essential evolutionarily-conserved nucleolar protein, yeastyeast

Gene NOP56, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NOP56YLR197W BI3Q9ZZW7 517 aa2.49□□□□□ -2.01
NOP56YLR197W TDH3P00359 332 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
NOP56YLR197W RPL24AP04449 155 aaKnown RBP2.48□□□□□ -2.01
NOP56YLR197W MRPL20P22354 195 aaPredicted RBP2.48□□□□□ -2.01
NOP56YLR197W YSR3P23501 404 aa2.48□□□□□ -2.01
NOP56YLR197W IFM1P25038 676 aa2.48□□□□□ -2.01
NOP56YLR197W YKL187CP34231 750 aa2.48□□□□□ -2.01
NOP56YLR197W RPC37P36121 282 aa2.48□□□□□ -2.01
NOP56YLR197W TAE1P38340 232 aa2.48□□□□□ -2.01
NOP56YLR197W ECM34P38728 170 aa2.48□□□□□ -2.01
NOP56YLR197W PET8P38921 284 aa2.48□□□□□ -2.01
NOP56YLR197W RCY1P39531 840 aa2.48□□□□□ -2.01
NOP56YLR197W SLM1P40485 686 aa2.48□□□□□ -2.01
NOP56YLR197W YIA6P40556 373 aa2.48□□□□□ -2.01
NOP56YLR197W FMP33P46998 180 aa2.48□□□□□ -2.01
NOP56YLR197W NUP84P52891 726 aa2.48□□□□□ -2.01
NOP56YLR197W SDS23P53172 527 aa2.48□□□□□ -2.01
NOP56YLR197W YGR067CP53243 804 aa2.48□□□□□ -2.01
NOP56YLR197W APJ1P53940 528 aa2.48□□□□□ -2.01
NOP56YLR197W SPP2Q02521 185 aa2.48□□□□□ -2.01
NOP56YLR197W YLR446WQ06204 433 aa2.48□□□□□ -2.01
NOP56YLR197W TFC7Q12415 435 aa2.48□□□□□ -2.01
NOP56YLR197W YPR064WQ12492 139 aa2.48□□□□□ -2.01
NOP56YLR197W ILV1P00927 576 aaKnown RBP2.47□□□□□ -2.01
NOP56YLR197W TIP20P33891 701 aa2.47□□□□□ -2.01
NOP56YLR197W YPC1P38298 316 aa2.47□□□□□ -2.01
NOP56YLR197W RRT13P40042 185 aa2.47□□□□□ -2.01
NOP56YLR197W SHQ1P40486 507 aaPredicted RBP2.47□□□□□ -2.01
NOP56YLR197W GDS1P41913 522 aa2.47□□□□□ -2.01
NOP56YLR197W API2Q04413 109 aa2.47□□□□□ -2.01
NOP56YLR197W POM33Q12164 279 aa2.47□□□□□ -2.01
NOP56YLR197W LAG2Q92325 660 aa2.47□□□□□ -2.01
NOP56YLR197W CCH1P50077 2039 aa2.47□□□□□ -2.01
NOP56YLR197W RPS19AP07280 144 aaKnown RBP2.47□□□□□ -2.01
NOP56YLR197W RPS19BP07281 144 aaPredicted RBP2.47□□□□□ -2.01
NOP56YLR197W GCG1P32656 232 aaKnown RBP2.47□□□□□ -2.01
NOP56YLR197W SKG6P32900 734 aaPredicted RBP2.47□□□□□ -2.01
NOP56YLR197W YNR066CP53752 436 aa2.47□□□□□ -2.01
NOP56YLR197W INP2Q03824 705 aa2.47□□□□□ -2.01
NOP56YLR197W ATC1Q04005 294 aa2.47□□□□□ -2.01
NOP56YLR197W GMC1Q04399 608 aa2.47□□□□□ -2.01
NOP56YLR197W RNH1Q04740 348 aa2.47□□□□□ -2.01
NOP56YLR197W YLL007CQ07799 665 aa2.47□□□□□ -2.01
NOP56YLR197W MIM1Q08176 113 aa2.47□□□□□ -2.01
NOP56YLR197W RRT8Q08219 342 aa2.47□□□□□ -2.01
NOP56YLR197W VIK1Q12045 647 aa2.47□□□□□ -2.01
NOP56YLR197W SSK22P25390 1331 aaPredicted RBP2.46□□□□□ -2.02
NOP56YLR197W FAB1P34756 2278 aa2.46□□□□□ -2.02
NOP56YLR197W CYM1P32898 989 aa2.46□□□□□ -2.02
NOP56YLR197W IMP3P32899 183 aaPredicted RBP2.46□□□□□ -2.02
NOP56YLR197W RFT1P38206 574 aaPredicted RBP2.46□□□□□ -2.02
NOP56YLR197W AGX1P43567 385 aa2.46□□□□□ -2.02
NOP56YLR197W GMC2Q06201 188 aa2.46□□□□□ -2.02
NOP56YLR197W TDH1P00360 332 aaKnown RBP2.45□□□□□ -2.02
NOP56YLR197W TFS1P14306 219 aa2.45□□□□□ -2.02
NOP56YLR197W COQ5P49017 307 aa2.45□□□□□ -2.02
NOP56YLR197W YPT32P51996 222 aaKnown RBP2.45□□□□□ -2.02
NOP56YLR197W KAP114P53067 1004 aa2.45□□□□□ -2.02
NOP56YLR197W FMP48P53233 369 aa2.45□□□□□ -2.02
NOP56YLR197W CPD1P53314 239 aa2.45□□□□□ -2.02
NOP56YLR197W INP1Q03694 420 aa2.45□□□□□ -2.02
NOP56YLR197W UTP15Q04305 513 aaKnown RBP2.45□□□□□ -2.02
NOP56YLR197W YOL029CQ08187 201 aa2.45□□□□□ -2.02
NOP56YLR197W YDR018CQ12185 396 aa2.45□□□□□ -2.02
NOP56YLR197W YAL067W-AQ8TGK6 75 aa2.45□□□□□ -2.02
NOP56YLR197W VPS1P21576 704 aaKnown RBP2.44□□□□□ -2.02
NOP56YLR197W FMT1P32785 401 aa2.44□□□□□ -2.02
NOP56YLR197W COT1P32798 439 aa2.44□□□□□ -2.02
NOP56YLR197W TPO5P36029 618 aa2.44□□□□□ -2.02
NOP56YLR197W DBP7P36120 742 aaKnown RBP2.44□□□□□ -2.02
NOP56YLR197W SCC4P40090 624 aa2.44□□□□□ -2.02
NOP56YLR197W MIC19P43594 170 aa2.44□□□□□ -2.02
NOP56YLR197W LIA1P47120 325 aaKnown RBP2.44□□□□□ -2.02
NOP56YLR197W YMR209CQ03648 457 aa2.44□□□□□ -2.02
NOP56YLR197W GRX3Q03835 250 aa2.44□□□□□ -2.02
NOP56YLR197W PEX30Q06169 523 aa2.44□□□□□ -2.02
NOP56YLR197W TAZ1Q06510 381 aa2.44□□□□□ -2.02
NOP56YLR197W YOR292CQ08743 309 aa2.44□□□□□ -2.02
NOP56YLR197W RUD3Q12234 484 aaKnown RBP2.44□□□□□ -2.02
NOP56YLR197W CDC13P32797 924 aaKnown RBP2.43□□□□□ -2.02
NOP56YLR197W MRPL6P32904 214 aa2.43□□□□□ -2.02
NOP56YLR197W SPT4P32914 102 aaPredicted RBP2.43□□□□□ -2.02
NOP56YLR197W COY1P34237 679 aa2.43□□□□□ -2.02
NOP56YLR197W BFR1P38934 470 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02 RIP-Chip
NOP56YLR197W LSB1P53281 241 aa2.43□□□□□ -2.02
NOP56YLR197W CWC21Q03375 135 aaKnown RBP2.43□□□□□ -2.02
NOP56YLR197W SEC13Q04491 297 aaKnown RBP2.43□□□□□ -2.02
NOP56YLR197W SGT2Q12118 346 aaKnown RBP2.43□□□□□ -2.02
NOP56YLR197W RSR1P13856 272 aa2.42□□□□□ -2.02
NOP56YLR197W MET16P18408 261 aaPredicted RBP2.42□□□□□ -2.02
NOP56YLR197W ZIP1P31111 875 aa2.42□□□□□ -2.02
NOP56YLR197W GPX1P36014 167 aa2.42□□□□□ -2.02
NOP56YLR197W VAB2P40003 282 aa2.42□□□□□ -2.02
NOP56YLR197W RRG9P40156 214 aa2.42□□□□□ -2.02
NOP56YLR197W YIL054WP40524 105 aa2.42□□□□□ -2.02
NOP56YLR197W YMR244WQ04018 355 aa2.42□□□□□ -2.02
NOP56YLR197W VBA1Q04301 562 aa2.42□□□□□ -2.02
NOP56YLR197W DPP1Q05521 289 aa2.42□□□□□ -2.02
NOP56YLR197W MED4Q12343 284 aa2.42□□□□□ -2.02
NOP56YLR197W TRM10Q12400 293 aa2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 43.9 ms