RNA–Protein interactions for RNA: YBR170C

NPL4, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene NPL4, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NPL4YBR170C IES6P32617 166 aa3.67□□□□□ -1.82
NPL4YBR170C PRS2P38620 318 aaKnown RBP3.67□□□□□ -1.82
NPL4YBR170C YAT2P40017 923 aa3.67□□□□□ -1.82
NPL4YBR170C PAN6P40459 309 aa3.67□□□□□ -1.82
NPL4YBR170C REE1P40893 198 aa3.67□□□□□ -1.82
NPL4YBR170C YPT32P51996 222 aaKnown RBP3.67□□□□□ -1.82
NPL4YBR170C TPC1P53257 314 aa3.67□□□□□ -1.82
NPL4YBR170C SCS7Q03529 384 aa3.67□□□□□ -1.82
NPL4YBR170C KRE28Q04431 385 aa3.67□□□□□ -1.82
NPL4YBR170C YMR317WQ04893 1140 aa3.67□□□□□ -1.82
NPL4YBR170C YLR446WQ06204 433 aa3.67□□□□□ -1.82
NPL4YBR170C DTD1Q07648 150 aaKnown RBP3.67□□□□□ -1.82
NPL4YBR170C FDH1Q08911 376 aa3.67□□□□□ -1.82
NPL4YBR170C IZH2Q12442 317 aa3.67□□□□□ -1.82
NPL4YBR170C HHF1P02309 103 aaKnown RBP3.66□□□□□ -1.82
NPL4YBR170C MRPL25P23369 157 aa3.66□□□□□ -1.82
NPL4YBR170C GIT1P25346 518 aa3.66□□□□□ -1.82
NPL4YBR170C YBL059WP34224 193 aa3.66□□□□□ -1.82
NPL4YBR170C RFS1P38234 210 aaKnown RBP3.66□□□□□ -1.82
NPL4YBR170C BIR1P47134 954 aa3.66□□□□□ -1.82
NPL4YBR170C SLT2Q00772 484 aa3.66□□□□□ -1.82
NPL4YBR170C HRI1Q05905 244 aaKnown RBP3.66□□□□□ -1.82
NPL4YBR170C YOS9Q99220 542 aa3.66□□□□□ -1.82
NPL4YBR170C RPP0P05317 312 aaKnown RBP3.65□□□□□ -1.82
NPL4YBR170C REV1P12689 985 aa3.65□□□□□ -1.82
NPL4YBR170C SPT15P13393 240 aaKnown RBP3.65□□□□□ -1.82
NPL4YBR170C URA10P30402 227 aa3.65□□□□□ -1.82
NPL4YBR170C MRX3P38172 270 aa3.65□□□□□ -1.82
NPL4YBR170C SDS24P38314 527 aa3.65□□□□□ -1.82
NPL4YBR170C PFS1P38872 237 aa3.65□□□□□ -1.82
NPL4YBR170C HIT1P46973 164 aa3.65□□□□□ -1.82
NPL4YBR170C NBP1P52919 319 aaPredicted RBP3.65□□□□□ -1.82
NPL4YBR170C PRP38Q00723 242 aaPredicted RBP3.65□□□□□ -1.82
NPL4YBR170C MHP1P43638 1398 aa3.65□□□□□ -1.83
NPL4YBR170C RHO1P06780 209 aaKnown RBP3.64□□□□□ -1.83
NPL4YBR170C PPA2P28239 310 aa3.64□□□□□ -1.83
NPL4YBR170C YKL187CP34231 750 aa3.64□□□□□ -1.83
NPL4YBR170C KRE9P39005 276 aa3.64□□□□□ -1.83
NPL4YBR170C YER186CP40101 306 aa3.64□□□□□ -1.83
NPL4YBR170C RPL10P41805 221 aaKnown RBP3.64□□□□□ -1.83
NPL4YBR170C SKI8Q02793 397 aaPredicted RBP3.64□□□□□ -1.83
NPL4YBR170C MRPS17Q03246 237 aaPredicted RBP3.64□□□□□ -1.83
NPL4YBR170C GMC1Q04399 608 aa3.64□□□□□ -1.83
NPL4YBR170C SFH1Q06168 426 aa3.64□□□□□ -1.83
NPL4YBR170C PEX30Q06169 523 aa3.64□□□□□ -1.83
NPL4YBR170C IRC25Q07951 179 aa3.64□□□□□ -1.83
NPL4YBR170C RPN8Q08723 338 aaKnown RBP3.64□□□□□ -1.83
NPL4YBR170C NDD1Q08887 554 aa3.64□□□□□ -1.83
NPL4YBR170C SNF8Q12483 233 aa3.64□□□□□ -1.83
NPL4YBR170C RPO26P20435 155 aa3.64□□□□□ -1.83
NPL4YBR170C PBN1P25580 416 aa3.64□□□□□ -1.83
NPL4YBR170C ASG7P46993 209 aa3.64□□□□□ -1.83
NPL4YBR170C GLG2P47011 380 aa3.64□□□□□ -1.83
NPL4YBR170C YJR054WP47114 497 aa3.64□□□□□ -1.83
NPL4YBR170C TPN1P53099 579 aa3.64□□□□□ -1.83
NPL4YBR170C PEX31P53203 462 aa3.64□□□□□ -1.83
NPL4YBR170C GIM3P53900 129 aa3.64□□□□□ -1.83
NPL4YBR170C SSQ1Q05931 657 aaPredicted RBP3.64□□□□□ -1.83
NPL4YBR170C SPO77Q06134 477 aa3.64□□□□□ -1.83
NPL4YBR170C YPR172WQ06608 200 aa3.64□□□□□ -1.83
NPL4YBR170C CTR3Q06686 241 aa3.64□□□□□ -1.83
NPL4YBR170C MIM1Q08176 113 aa3.64□□□□□ -1.83
NPL4YBR170C PLP2Q12017 286 aa3.64□□□□□ -1.83
NPL4YBR170C BI3Q9ZZW7 517 aa3.64□□□□□ -1.83
NPL4YBR170C MRPL20P22354 195 aaPredicted RBP3.63□□□□□ -1.83
NPL4YBR170C RPL24BP24000 155 aaKnown RBP3.63□□□□□ -1.83
NPL4YBR170C NAM9P27929 486 aa3.63□□□□□ -1.83
NPL4YBR170C ARO2P28777 376 aaKnown RBP3.63□□□□□ -1.83
NPL4YBR170C YER184CP39961 794 aa3.63□□□□□ -1.83
NPL4YBR170C HOC1P47124 396 aa3.63□□□□□ -1.83
NPL4YBR170C IBA57P47158 497 aa3.63□□□□□ -1.83
NPL4YBR170C TRM44Q02648 567 aaKnown RBP3.63□□□□□ -1.83
NPL4YBR170C DPP1Q05521 289 aa3.63□□□□□ -1.83
NPL4YBR170C CSM4Q08955 156 aa3.63□□□□□ -1.83
NPL4YBR170C PER33Q12144 273 aa3.63□□□□□ -1.83
NPL4YBR170C YOR114WQ12219 294 aa3.63□□□□□ -1.83
NPL4YBR170C TFC7Q12415 435 aa3.63□□□□□ -1.83
NPL4YBR170C LAG2Q92325 660 aa3.63□□□□□ -1.83
NPL4YBR170C QCR6P00127 147 aa3.62□□□□□ -1.83
NPL4YBR170C NHP6BP11633 99 aaKnown RBP3.62□□□□□ -1.83
NPL4YBR170C TCP1P12612 559 aaKnown RBP3.62□□□□□ -1.83
NPL4YBR170C MER1P16523 270 aa3.62□□□□□ -1.83
NPL4YBR170C COQ1P18900 473 aa3.62□□□□□ -1.83
NPL4YBR170C ZRC1P20107 442 aa3.62□□□□□ -1.83
NPL4YBR170C YBR062CP38239 180 aa3.62□□□□□ -1.83
NPL4YBR170C ATG12P38316 186 aa3.62□□□□□ -1.83
NPL4YBR170C VAB2P40003 282 aa3.62□□□□□ -1.83
NPL4YBR170C YJR012CP47087 207 aa3.62□□□□□ -1.83
NPL4YBR170C MAL13P53338 473 aa3.62□□□□□ -1.83
NPL4YBR170C YDR209CQ03480 137 aa3.62□□□□□ -1.83
NPL4YBR170C BNA7Q04066 261 aa3.62□□□□□ -1.83
NPL4YBR170C YLR177WQ06251 628 aa3.62□□□□□ -1.83
NPL4YBR170C SME1Q12330 94 aaPredicted RBP3.62□□□□□ -1.83
NPL4YBR170C RPS3P05750 240 aaKnown RBP3.61□□□□□ -1.83
NPL4YBR170C PHO2P07269 559 aa3.61□□□□□ -1.83
NPL4YBR170C DAL81P21657 970 aa3.61□□□□□ -1.83
NPL4YBR170C IFM1P25038 676 aa3.61□□□□□ -1.83
NPL4YBR170C RNA15P25299 296 aaPredicted RBP3.61□□□□□ -1.83
NPL4YBR170C MGM101P32787 269 aaKnown RBP3.61□□□□□ -1.83
NPL4YBR170C FMP46P36141 133 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms