RNA–Protein interactions for RNA: YPR057W

BRR1, Transcript of snRNP protein component of spliceosomal snRNPs, yeastyeast

Gene BRR1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRR1YPR057W TAD3Q9URQ3 322 aa8.51□□□□□ -1.05
BRR1YPR057W TOR2P32600 2474 aaKnown RBP8.51□□□□□ -1.05
BRR1YPR057W CAN1P04817 590 aa8.5□□□□□ -1.05
BRR1YPR057W DAL82P21705 255 aa8.5□□□□□ -1.05
BRR1YPR057W RPA135P22138 1203 aaKnown RBP8.5□□□□□ -1.05
BRR1YPR057W EXG1P23776 448 aaKnown RBP8.5□□□□□ -1.05
BRR1YPR057W RAD51P25454 400 aa8.5□□□□□ -1.05
BRR1YPR057W CWH43P25618 953 aa8.5□□□□□ -1.05
BRR1YPR057W FUN19P28003 413 aaPredicted RBP8.5□□□□□ -1.05
BRR1YPR057W FUN26P31381 517 aa8.5□□□□□ -1.05
BRR1YPR057W THI2P38141 450 aa8.5□□□□□ -1.05
BRR1YPR057W SDP1P40479 209 aa8.5□□□□□ -1.05
BRR1YPR057W BAP3P41815 604 aa8.5□□□□□ -1.05
BRR1YPR057W YFR054CP43622 192 aa8.5□□□□□ -1.05
BRR1YPR057W SFH5P47008 294 aa8.5□□□□□ -1.05
BRR1YPR057W OGG1P53397 376 aaPredicted RBP8.5□□□□□ -1.05
BRR1YPR057W TDA1Q03533 586 aa8.5□□□□□ -1.05
BRR1YPR057W COQ10Q08058 207 aa8.5□□□□□ -1.05
BRR1YPR057W RRG7Q08774 242 aaPredicted RBP8.5□□□□□ -1.05
BRR1YPR057W SFG1Q12507 346 aa8.5□□□□□ -1.05
BRR1YPR057W KIN28P06242 306 aa8.49□□□□□ -1.05
BRR1YPR057W PBS2P08018 668 aa8.49□□□□□ -1.05
BRR1YPR057W HMG1P12683 1054 aa8.49□□□□□ -1.05
BRR1YPR057W BUD23P25627 275 aaPredicted RBP8.49□□□□□ -1.05
BRR1YPR057W MDH3P32419 343 aaKnown RBP RIP-Chip data8.49□□□□□ -1.05not detected
BRR1YPR057W HSP150P32478 413 aa8.49□□□□□ -1.05
BRR1YPR057W HIS7P33734 552 aaKnown RBP8.49□□□□□ -1.05
BRR1YPR057W SRL3P36167 246 aa8.49□□□□□ -1.05
BRR1YPR057W CHK1P38147 527 aa8.49□□□□□ -1.05
BRR1YPR057W PAU24P38155 120 aa8.49□□□□□ -1.05
BRR1YPR057W FET3P38993 636 aa8.49□□□□□ -1.05
BRR1YPR057W PHO90P39535 881 aa8.49□□□□□ -1.05
BRR1YPR057W YJL193WP39542 402 aa8.49□□□□□ -1.05
BRR1YPR057W ATG18P43601 500 aa8.49□□□□□ -1.05
BRR1YPR057W ARO8P53090 500 aaKnown RBP8.49□□□□□ -1.05
BRR1YPR057W MSS11Q03825 758 aa8.49□□□□□ -1.05
BRR1YPR057W MRPL1Q04599 285 aa8.49□□□□□ -1.05
BRR1YPR057W DCR2Q05924 578 aa8.49□□□□□ -1.05
BRR1YPR057W SEI1Q06058 285 aa8.49□□□□□ -1.05
BRR1YPR057W BDS1Q08347 646 aa8.49□□□□□ -1.05
BRR1YPR057W RDR1Q08904 546 aa8.49□□□□□ -1.05
BRR1YPR057W RLM1Q12224 676 aa8.49□□□□□ -1.05
BRR1YPR057W RTN2Q12443 393 aa8.49□□□□□ -1.05
BRR1YPR057W YPR1Q12458 312 aa8.49□□□□□ -1.05
BRR1YPR057W YLR099W-AQ3E798 87 aa8.49□□□□□ -1.05
BRR1YPR057W YIL046W-AQ3E7Z4 54 aa8.49□□□□□ -1.05
BRR1YPR057W QCR7P00128 127 aa8.48□□□□□ -1.05
BRR1YPR057W CYT1P07143 309 aa8.48□□□□□ -1.05
BRR1YPR057W CAP2P13517 287 aa8.48□□□□□ -1.05
BRR1YPR057W DOA4P32571 926 aa8.48□□□□□ -1.05
BRR1YPR057W VPS17P32913 551 aa8.48□□□□□ -1.05
BRR1YPR057W CCZ1P38273 704 aa8.48□□□□□ -1.05
BRR1YPR057W YBR137WP38276 179 aa8.48□□□□□ -1.05
BRR1YPR057W VBA2P38358 474 aaKnown RBP8.48□□□□□ -1.05
BRR1YPR057W YHR180WP38868 163 aa8.48□□□□□ -1.05
BRR1YPR057W MLH1P38920 769 aa8.48□□□□□ -1.05
BRR1YPR057W RTT105P40063 208 aa8.48□□□□□ -1.05
BRR1YPR057W PAM16P42949 149 aa8.48□□□□□ -1.05
BRR1YPR057W IRC6P43615 237 aa8.48□□□□□ -1.05
BRR1YPR057W IRC18P47056 224 aa8.48□□□□□ -1.05
BRR1YPR057W VOA1P53262 265 aa8.48□□□□□ -1.05
BRR1YPR057W CUZ1P53899 274 aa8.48□□□□□ -1.05
BRR1YPR057W YAT1P80235 687 aa8.48□□□□□ -1.05
BRR1YPR057W BUR2Q05949 395 aa8.48□□□□□ -1.05
BRR1YPR057W UTP21Q06078 939 aaPredicted RBP8.48□□□□□ -1.05
BRR1YPR057W RGC1Q06108 1083 aaKnown RBP8.48□□□□□ -1.05
BRR1YPR057W HRT1Q08273 121 aa8.48□□□□□ -1.05
BRR1YPR057W BTS1Q12051 335 aa8.48□□□□□ -1.05
BRR1YPR057W PUT3P25502 979 aaPredicted RBP8.47□□□□□ -1.05
BRR1YPR057W PAD1P33751 242 aaKnown RBP RIP-Chip data8.47□□□□□ -1.05not detected
BRR1YPR057W SHE2P36068 246 aaKnown RBP RIP-Chip data8.47□□□□□ -1.05not detected
BRR1YPR057W UME6P39001 836 aa8.47□□□□□ -1.05
BRR1YPR057W CUP9P41817 306 aa8.47□□□□□ -1.05
BRR1YPR057W PMT6P42934 759 aa8.47□□□□□ -1.05
BRR1YPR057W PMT5P52867 743 aa8.47□□□□□ -1.05
BRR1YPR057W TRS23Q03784 219 aa8.47□□□□□ -1.05
BRR1YPR057W HLR1Q04429 423 aa8.47□□□□□ -1.05
BRR1YPR057W YMR252CQ04814 134 aa8.47□□□□□ -1.05
BRR1YPR057W YPR109WQ06104 294 aa8.47□□□□□ -1.05
BRR1YPR057W PDE2P06776 526 aa8.46□□□□□ -1.06
BRR1YPR057W COX9P07255 59 aa8.46□□□□□ -1.06
BRR1YPR057W MRP1P10662 321 aaKnown RBP8.46□□□□□ -1.06
BRR1YPR057W RPB8P20436 146 aa8.46□□□□□ -1.06
BRR1YPR057W GAS1P22146 559 aaKnown RBP8.46□□□□□ -1.06
BRR1YPR057W HOM6P31116 359 aaKnown RBP8.46□□□□□ -1.06
BRR1YPR057W TMA19P35691 167 aaKnown RBP8.46□□□□□ -1.06
BRR1YPR057W MSE1P48525 536 aa8.46□□□□□ -1.06
BRR1YPR057W PFA5Q03289 374 aa8.46□□□□□ -1.06
BRR1YPR057W RRP9Q06506 573 aaKnown RBP8.46□□□□□ -1.06
BRR1YPR057W MRPL35Q06678 367 aa8.46□□□□□ -1.06
BRR1YPR057W AIM6Q07716 390 aa8.46□□□□□ -1.06
BRR1YPR057W YPL199CQ08954 240 aa8.46□□□□□ -1.06
BRR1YPR057W PIN2Q12057 282 aa8.46□□□□□ -1.06
BRR1YPR057W YOR343CQ12484 108 aa8.46□□□□□ -1.06
BRR1YPR057W BOS1P25385 244 aa8.45□□□□□ -1.06
BRR1YPR057W RCN1P36054 211 aa8.45□□□□□ -1.06
BRR1YPR057W ANR2P36090 516 aaPredicted RBP8.45□□□□□ -1.06
BRR1YPR057W PTH1P38876 190 aaKnown RBP8.45□□□□□ -1.06
BRR1YPR057W FAA3P39002 694 aa8.45□□□□□ -1.06
BRR1YPR057W YER184CP39961 794 aa8.45□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms