RNA–Protein interactions for RNA: YMR048W

CSM3, Transcript of Replication fork associated factor, yeastyeast

Gene CSM3, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSM3YMR048W NUP84P52891 726 aa3.11□□□□□ -1.91
CSM3YMR048W UTP6Q02354 440 aaKnown RBP3.11□□□□□ -1.91
CSM3YMR048W CDD1Q06549 142 aa3.11□□□□□ -1.91
CSM3YMR048W IPK1Q06667 281 aa3.11□□□□□ -1.91
CSM3YMR048W YLR012CQ07927 99 aa3.11□□□□□ -1.91
CSM3YMR048W LDS2Q08218 356 aa3.11□□□□□ -1.91
CSM3YMR048W IZH2Q12442 317 aa3.11□□□□□ -1.91
CSM3YMR048W TFB5Q3E7C1 72 aaPredicted RBP3.11□□□□□ -1.91
CSM3YMR048W BI3Q9ZZW7 517 aa3.11□□□□□ -1.91
CSM3YMR048W FAB1P34756 2278 aa3.1□□□□□ -1.91
CSM3YMR048W PAB1P04147 577 aaKnown RBP RIP-Chip data3.1□□□□□ -1.91not detected
CSM3YMR048W SSC1P0CS90 654 aaKnown RBP3.1□□□□□ -1.91
CSM3YMR048W MSI1P13712 422 aa3.1□□□□□ -1.91
CSM3YMR048W MRPL40P36534 297 aa3.1□□□□□ -1.91
CSM3YMR048W GEP4P38812 185 aa3.1□□□□□ -1.91
CSM3YMR048W FHL1P39521 936 aa3.1□□□□□ -1.91
CSM3YMR048W PMT5P52867 743 aa3.1□□□□□ -1.91
CSM3YMR048W YNL040WP53960 456 aaPredicted RBP3.1□□□□□ -1.91
CSM3YMR048W YPL107WQ02873 248 aa3.1□□□□□ -1.91
CSM3YMR048W YMR010WQ03687 405 aa3.1□□□□□ -1.91
CSM3YMR048W ENT5Q03769 411 aaKnown RBP3.1□□□□□ -1.91
CSM3YMR048W YFH1Q07540 174 aa3.1□□□□□ -1.91
CSM3YMR048W DDC1Q08949 612 aa3.1□□□□□ -1.91
CSM3YMR048W SMF3Q12078 473 aaPredicted RBP3.1□□□□□ -1.91
CSM3YMR048W YDR018CQ12185 396 aa3.1□□□□□ -1.91
CSM3YMR048W RUD3Q12234 484 aaKnown RBP3.1□□□□□ -1.91
CSM3YMR048W JID1Q12350 301 aa3.1□□□□□ -1.91
CSM3YMR048W YCR024C-BQ3E7Z8 88 aa3.1□□□□□ -1.91
CSM3YMR048W GPA2P10823 449 aa3.09□□□□□ -1.91
CSM3YMR048W PHO84P25297 587 aaKnown RBP3.09□□□□□ -1.91
CSM3YMR048W MEI4P29467 408 aa3.09□□□□□ -1.91
CSM3YMR048W SPT10P35208 640 aa3.09□□□□□ -1.91
CSM3YMR048W DAD2P36162 133 aa3.09□□□□□ -1.91
CSM3YMR048W APE4P38821 490 aa3.09□□□□□ -1.91
CSM3YMR048W AVT2P39981 480 aa3.09□□□□□ -1.91
CSM3YMR048W YNL208WP40159 199 aaKnown RBP3.09□□□□□ -1.91
CSM3YMR048W UFE1P41834 346 aa3.09□□□□□ -1.91
CSM3YMR048W CDC14Q00684 551 aa3.09□□□□□ -1.91
CSM3YMR048W TDA1Q03533 586 aa3.09□□□□□ -1.91
CSM3YMR048W STE23Q06010 1027 aa3.09□□□□□ -1.91
CSM3YMR048W LDB18Q07887 179 aa3.09□□□□□ -1.91
CSM3YMR048W EMP46Q12396 444 aa3.09□□□□□ -1.91
CSM3YMR048W IZH4Q99393 312 aa3.09□□□□□ -1.91
CSM3YMR048W PEX34P25584 144 aa3.08□□□□□ -1.92
CSM3YMR048W LAS1P36146 502 aaPredicted RBP3.08□□□□□ -1.92
CSM3YMR048W GPX2P38143 162 aa3.08□□□□□ -1.92
CSM3YMR048W YSW1P38280 609 aa3.08□□□□□ -1.92
CSM3YMR048W YHK8P38776 514 aa3.08□□□□□ -1.92
CSM3YMR048W SCC4P40090 624 aa3.08□□□□□ -1.92
CSM3YMR048W SNL1P40548 159 aa3.08□□□□□ -1.92
CSM3YMR048W PRP24P49960 444 aaKnown RBP3.08□□□□□ -1.92
CSM3YMR048W TOS2P50078 622 aa3.08□□□□□ -1.92
CSM3YMR048W MST27P53176 234 aa3.08□□□□□ -1.92
CSM3YMR048W RCF2P53721 224 aa3.08□□□□□ -1.92
CSM3YMR048W KTR6P54070 446 aa3.08□□□□□ -1.92
CSM3YMR048W INP2Q03824 705 aa3.08□□□□□ -1.92
CSM3YMR048W LIP2Q06005 328 aa3.08□□□□□ -1.92
CSM3YMR048W PEX27Q08580 376 aa3.08□□□□□ -1.92
CSM3YMR048W PGC1Q08959 321 aa3.08□□□□□ -1.92
CSM3YMR048W MOT1P32333 1867 aa3.07□□□□□ -1.92
CSM3YMR048W RPB5P20434 215 aa3.07□□□□□ -1.92
CSM3YMR048W TIR2P33890 251 aa3.07□□□□□ -1.92
CSM3YMR048W RTC2P38279 296 aa3.07□□□□□ -1.92
CSM3YMR048W YHR177WP38867 453 aa3.07□□□□□ -1.92
CSM3YMR048W YEL028WP39989 153 aa3.07□□□□□ -1.92
CSM3YMR048W EDC3P39998 551 aaKnown RBP3.07□□□□□ -1.92
CSM3YMR048W MEP1P40260 492 aa3.07□□□□□ -1.92
CSM3YMR048W EGT2P42835 1041 aa3.07□□□□□ -1.92
CSM3YMR048W YFR018CP43599 363 aa3.07□□□□□ -1.92
CSM3YMR048W FLC3P53121 802 aa3.07□□□□□ -1.92
CSM3YMR048W SLT2Q00772 484 aa3.07□□□□□ -1.92
CSM3YMR048W VHS1Q03785 461 aa3.07□□□□□ -1.92
CSM3YMR048W SPG3Q04398 127 aaPredicted RBP3.07□□□□□ -1.92
CSM3YMR048W YPR091CQ06833 770 aa3.07□□□□□ -1.92
CSM3YMR048W NFI1Q12216 726 aa3.07□□□□□ -1.92
CSM3YMR048W PCL9Q12477 304 aa3.07□□□□□ -1.92
CSM3YMR048W RNA1P11745 407 aaKnown RBP3.06□□□□□ -1.92
CSM3YMR048W SCH9P11792 824 aaKnown RBP3.06□□□□□ -1.92
CSM3YMR048W RSR1P13856 272 aa3.06□□□□□ -1.92
CSM3YMR048W POL30P15873 258 aaKnown RBP3.06□□□□□ -1.92
CSM3YMR048W MET16P18408 261 aaPredicted RBP3.06□□□□□ -1.92
CSM3YMR048W AAT2P23542 418 aaKnown RBP3.06□□□□□ -1.92
CSM3YMR048W URA10P30402 227 aa3.06□□□□□ -1.92
CSM3YMR048W SMI1P32566 505 aa3.06□□□□□ -1.92
CSM3YMR048W SMF2P38778 549 aa3.06□□□□□ -1.92
CSM3YMR048W MIG3P39943 394 aa3.06□□□□□ -1.92
CSM3YMR048W OXA1P39952 402 aa3.06□□□□□ -1.92
CSM3YMR048W OSW5P40219 148 aa3.06□□□□□ -1.92
CSM3YMR048W DFG10P40526 253 aa3.06□□□□□ -1.92
CSM3YMR048W BUD13P46947 266 aaPredicted RBP3.06□□□□□ -1.92
CSM3YMR048W MPS2P53159 387 aa3.06□□□□□ -1.92
CSM3YMR048W CLD1P53264 445 aa3.06□□□□□ -1.92
CSM3YMR048W CRH1P53301 507 aa3.06□□□□□ -1.92
CSM3YMR048W NHP10Q03435 203 aa3.06□□□□□ -1.92
CSM3YMR048W YPQ1Q12010 308 aa3.06□□□□□ -1.92
CSM3YMR048W FCY22Q12119 530 aa3.06□□□□□ -1.92
CSM3YMR048W SKS1Q12505 502 aa3.06□□□□□ -1.92
CSM3YMR048W YOR338WQ99326 363 aa3.06□□□□□ -1.92
CSM3YMR048W MDM35O60200 86 aa3.05□□□□□ -1.92
CSM3YMR048W RAD1P06777 1100 aa3.05□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms