RNA–Protein interactions for RNA: YHR003C

TCD1, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeastyeast

Gene TCD1, Length 1,290 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCD1YHR003C FAU1P40099 211 aa2.58□□□□□ -2
TCD1YHR003C YRB1P41920 201 aaKnown RBP2.58□□□□□ -2
TCD1YHR003C AGP3P43548 558 aa2.58□□□□□ -2
TCD1YHR003C RPC17P47076 161 aa2.58□□□□□ -2
TCD1YHR003C NAS6P50086 228 aa2.58□□□□□ -2
TCD1YHR003C LIF1P53150 421 aa2.58□□□□□ -2
TCD1YHR003C YGR168CP53293 376 aa2.58□□□□□ -2
TCD1YHR003C OKP1P53298 406 aa2.58□□□□□ -2
TCD1YHR003C GPI15P53961 229 aa2.58□□□□□ -2
TCD1YHR003C DIA1P54005 336 aa2.58□□□□□ -2
TCD1YHR003C RHO4Q00246 291 aa2.58□□□□□ -2
TCD1YHR003C YPL014WQ02606 381 aa2.58□□□□□ -2
TCD1YHR003C NUP116Q02630 1113 aa2.58□□□□□ -2
TCD1YHR003C SMP3Q04174 516 aa2.58□□□□□ -2
TCD1YHR003C NAT4Q04751 285 aa2.58□□□□□ -2
TCD1YHR003C ADH6Q04894 360 aaKnown RBP2.58□□□□□ -2
TCD1YHR003C YDR222WQ04925 415 aa2.58□□□□□ -2
TCD1YHR003C ERP1Q05359 219 aaKnown RBP2.58□□□□□ -2
TCD1YHR003C GLO2Q05584 274 aa2.58□□□□□ -2
TCD1YHR003C DIC1Q06143 298 aa2.58□□□□□ -2
TCD1YHR003C CMS1Q07897 291 aaKnown RBP2.58□□□□□ -2
TCD1YHR003C IMA2Q08295 589 aa2.58□□□□□ -2
TCD1YHR003C ABP140Q08641 628 aaKnown RBP2.58□□□□□ -2
TCD1YHR003C SAM4Q08985 325 aaKnown RBP2.58□□□□□ -2
TCD1YHR003C MSH5Q12175 901 aa2.58□□□□□ -2
TCD1YHR003C ORT1Q12375 292 aa2.58□□□□□ -2
TCD1YHR003C YOR338WQ99326 363 aa2.58□□□□□ -2
TCD1YHR003C PMD1P32634 1753 aa2.57□□□□□ -2
TCD1YHR003C THP2O13539 261 aaKnown RBP2.57□□□□□ -2
TCD1YHR003C ATP6P00854 259 aa2.57□□□□□ -2
TCD1YHR003C MES1P00958 751 aaKnown RBP2.57□□□□□ -2
TCD1YHR003C HEM2P05373 342 aa2.57□□□□□ -2
TCD1YHR003C RPL40AP0CH08 128 aaKnown RBP2.57□□□□□ -2
TCD1YHR003C RPL40BP0CH09 128 aaKnown RBP2.57□□□□□ -2
TCD1YHR003C TCP1P12612 559 aaKnown RBP2.57□□□□□ -2
TCD1YHR003C MTF1P14908 341 aaKnown RBP2.57□□□□□ -2
TCD1YHR003C UTR1P21373 530 aa2.57□□□□□ -2
TCD1YHR003C MRPL8P22353 238 aa2.57□□□□□ -2
TCD1YHR003C RBK1P25332 333 aa2.57□□□□□ -2
TCD1YHR003C BUB3P26449 341 aa2.57□□□□□ -2
TCD1YHR003C ADE1P27616 306 aa2.57□□□□□ -2
TCD1YHR003C VMA6P32366 345 aaKnown RBP2.57□□□□□ -2
TCD1YHR003C APE2P32454 952 aaKnown RBP2.57□□□□□ -2
TCD1YHR003C NUP2P32499 720 aa2.57□□□□□ -2
TCD1YHR003C RIB1P38066 345 aa2.57□□□□□ -2
TCD1YHR003C SMF2P38778 549 aa2.57□□□□□ -2
TCD1YHR003C RPH1P39956 796 aa2.57□□□□□ -2
TCD1YHR003C DSE1P40077 573 aa2.57□□□□□ -2
TCD1YHR003C MMF1P40185 145 aaKnown RBP2.57□□□□□ -2
TCD1YHR003C CSM2P40465 213 aa2.57□□□□□ -2
TCD1YHR003C DSN1P40568 576 aa2.57□□□□□ -2
TCD1YHR003C RTT101P47050 842 aa2.57□□□□□ -2
TCD1YHR003C ABM1P47146 123 aa2.57□□□□□ -2
TCD1YHR003C RTC4P53850 401 aa2.57□□□□□ -2
TCD1YHR003C REX4Q08237 289 aa2.57□□□□□ -2
TCD1YHR003C SEY1Q99287 776 aa2.57□□□□□ -2
TCD1YHR003C GSC2P40989 1895 aa2.56□□□□□ -2
TCD1YHR003C RAD1P06777 1100 aa2.56□□□□□ -2
TCD1YHR003C RAD7P06779 565 aa2.56□□□□□ -2
TCD1YHR003C RHO1P06780 209 aaKnown RBP2.56□□□□□ -2
TCD1YHR003C ATP1P07251 545 aaKnown RBP2.56□□□□□ -2
TCD1YHR003C MATALPHA2P0CY08 210 aa2.56□□□□□ -2
TCD1YHR003C HMLALPHA2P0CY09 210 aa2.56□□□□□ -2
TCD1YHR003C HPR1P17629 752 aaKnown RBP2.56□□□□□ -2
TCD1YHR003C ARF2P19146 181 aaKnown RBP2.56□□□□□ -2
TCD1YHR003C FAR1P21268 830 aa2.56□□□□□ -2
TCD1YHR003C VPS1P21576 704 aaKnown RBP2.56□□□□□ -2
TCD1YHR003C YCR007CP25354 239 aa2.56□□□□□ -2
TCD1YHR003C NDC1P32500 655 aa2.56□□□□□ -2
TCD1YHR003C GDH2P33327 1092 aaKnown RBP2.56□□□□□ -2
TCD1YHR003C YOX1P34161 385 aa2.56□□□□□ -2
TCD1YHR003C SIP2P34164 415 aaKnown RBP2.56□□□□□ -2
TCD1YHR003C MYO3P36006 1272 aa2.56□□□□□ -2
TCD1YHR003C YBP1P38315 674 aa2.56□□□□□ -2
TCD1YHR003C RTC3P38804 111 aaPredicted RBP2.56□□□□□ -2
TCD1YHR003C SUR2P38992 349 aa2.56□□□□□ -2
TCD1YHR003C LYS1P38998 373 aaRIP-Chip data2.56□□□□□ -2not detected
TCD1YHR003C NPT1P39683 429 aaKnown RBP2.56□□□□□ -2
TCD1YHR003C SLM1P40485 686 aa2.56□□□□□ -2
TCD1YHR003C YJL213WP40896 331 aa2.56□□□□□ -2
TCD1YHR003C TOS2P50078 622 aa2.56□□□□□ -2
TCD1YHR003C COS10P52924 374 aa2.56□□□□□ -2
TCD1YHR003C SEH1P53011 349 aaKnown RBP2.56□□□□□ -2
TCD1YHR003C GPI1P53306 609 aa2.56□□□□□ -2
TCD1YHR003C RRN9P53437 365 aa2.56□□□□□ -2
TCD1YHR003C SED5Q01590 340 aa2.56□□□□□ -2
TCD1YHR003C TRM44Q02648 567 aaKnown RBP2.56□□□□□ -2
TCD1YHR003C IVY1Q04934 453 aa2.56□□□□□ -2
TCD1YHR003C CDC123Q05791 360 aa2.56□□□□□ -2
TCD1YHR003C VIK1Q12045 647 aa2.56□□□□□ -2
TCD1YHR003C YLR108CQ12259 485 aa2.56□□□□□ -2
TCD1YHR003C SET6Q12529 373 aa2.56□□□□□ -2
TCD1YHR003C HIS1P00498 297 aaKnown RBP2.55□□□□□ -2
TCD1YHR003C YAK1P14680 807 aa2.55□□□□□ -2
TCD1YHR003C CBS2P14905 389 aa2.55□□□□□ -2
TCD1YHR003C STE18P18852 110 aa2.55□□□□□ -2
TCD1YHR003C ERG9P29704 444 aa2.55□□□□□ -2
TCD1YHR003C PRP18P33411 251 aaPredicted RBP2.55□□□□□ -2
TCD1YHR003C SKT5P34226 696 aa2.55□□□□□ -2
TCD1YHR003C KDX1P36005 433 aa2.55□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms