RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W SPS100P13130 326 aa2.59□□□□□ -1.99
SEC4YFL005W TAE1P38340 232 aa2.59□□□□□ -1.99
SEC4YFL005W RRT13P40042 185 aa2.59□□□□□ -1.99
SEC4YFL005W GPI8P49018 411 aa2.59□□□□□ -1.99
SEC4YFL005W PNC1P53184 216 aaKnown RBP2.59□□□□□ -1.99
SEC4YFL005W BIO4P53630 237 aa2.59□□□□□ -1.99
SEC4YFL005W SNX41Q04053 625 aa2.59□□□□□ -1.99
SEC4YFL005W API2Q04413 109 aa2.59□□□□□ -1.99
SEC4YFL005W ECM18Q04623 453 aa2.59□□□□□ -1.99
SEC4YFL005W PBP4Q07362 185 aaKnown RBP2.59□□□□□ -1.99
SEC4YFL005W YPQ1Q12010 308 aa2.59□□□□□ -1.99
SEC4YFL005W YOL085CQ99345 113 aa2.59□□□□□ -1.99
SEC4YFL005W GAL7P08431 366 aa2.58□□□□□ -2
SEC4YFL005W ERD1P16151 362 aa2.58□□□□□ -2
SEC4YFL005W YKL187CP34231 750 aa2.58□□□□□ -2
SEC4YFL005W YMR262WP38430 313 aa2.58□□□□□ -2
SEC4YFL005W VPS45P38932 577 aa2.58□□□□□ -2
SEC4YFL005W SOP4P39543 234 aaPredicted RBP2.58□□□□□ -2
SEC4YFL005W YFL012WP43580 148 aa2.58□□□□□ -2
SEC4YFL005W HIT1P46973 164 aa2.58□□□□□ -2
SEC4YFL005W SDS23P53172 527 aa2.58□□□□□ -2
SEC4YFL005W ECM11Q04110 302 aa2.58□□□□□ -2
SEC4YFL005W YMR111CQ04461 462 aaPredicted RBP2.58□□□□□ -2
SEC4YFL005W ERV41Q04651 352 aa2.58□□□□□ -2
SEC4YFL005W BCP1Q06338 283 aa2.58□□□□□ -2
SEC4YFL005W PIN3Q06449 215 aa2.58□□□□□ -2
SEC4YFL005W YLR413WQ06689 675 aa2.58□□□□□ -2
SEC4YFL005W YPL245WQ12179 454 aaKnown RBP2.58□□□□□ -2
SEC4YFL005W YDR018CQ12185 396 aa2.58□□□□□ -2
SEC4YFL005W UTP23Q12339 254 aaKnown RBP2.58□□□□□ -2
SEC4YFL005W RAX2Q12465 1220 aa2.58□□□□□ -2
SEC4YFL005W IZH4Q99393 312 aa2.58□□□□□ -2
SEC4YFL005W CCH1P50077 2039 aa2.58□□□□□ -2
SEC4YFL005W RAD7P06779 565 aa2.57□□□□□ -2
SEC4YFL005W RPS19AP07280 144 aaKnown RBP2.57□□□□□ -2
SEC4YFL005W RPS19BP07281 144 aaPredicted RBP2.57□□□□□ -2
SEC4YFL005W PUT4P15380 627 aa2.57□□□□□ -2
SEC4YFL005W MCH2P36032 473 aa2.57□□□□□ -2
SEC4YFL005W SWD2P36104 329 aaPredicted RBP2.57□□□□□ -2
SEC4YFL005W DSE1P40077 573 aa2.57□□□□□ -2
SEC4YFL005W YGR266WP53326 701 aa2.57□□□□□ -2
SEC4YFL005W TIR4Q12218 487 aaPredicted RBP2.57□□□□□ -2
SEC4YFL005W YBL111CQ3E7Y5 667 aa2.57□□□□□ -2
SEC4YFL005W YAL067W-AQ8TGK6 75 aa2.57□□□□□ -2
SEC4YFL005W RPC40P07703 335 aaKnown RBP2.56□□□□□ -2
SEC4YFL005W CYM1P32898 989 aa2.56□□□□□ -2
SEC4YFL005W CTM1P38818 585 aa2.56□□□□□ -2
SEC4YFL005W PET8P38921 284 aa2.56□□□□□ -2
SEC4YFL005W GCD14P46959 383 aaPredicted RBP2.56□□□□□ -2
SEC4YFL005W FLC3P53121 802 aa2.56□□□□□ -2
SEC4YFL005W YGR067CP53243 804 aa2.56□□□□□ -2
SEC4YFL005W YNL260CP53846 198 aa2.56□□□□□ -2
SEC4YFL005W INP2Q03824 705 aa2.56□□□□□ -2
SEC4YFL005W MIM1Q08176 113 aa2.56□□□□□ -2
SEC4YFL005W YOL029CQ08187 201 aa2.56□□□□□ -2
SEC4YFL005W APC9Q12107 265 aa2.56□□□□□ -2
SEC4YFL005W MRPL23Q12487 163 aaPredicted RBP2.56□□□□□ -2
SEC4YFL005W BI3Q9ZZW7 517 aa2.56□□□□□ -2
SEC4YFL005W RPL31AP0C2H8 113 aaKnown RBP2.55□□□□□ -2
SEC4YFL005W MRPL20P22354 195 aaPredicted RBP2.55□□□□□ -2
SEC4YFL005W GPI12P23797 304 aa2.55□□□□□ -2
SEC4YFL005W MEK1P24719 497 aaPredicted RBP2.55□□□□□ -2
SEC4YFL005W RPL16BP26785 198 aaKnown RBP2.55□□□□□ -2
SEC4YFL005W INO2P26798 304 aa2.55□□□□□ -2
SEC4YFL005W ZIP1P31111 875 aa2.55□□□□□ -2
SEC4YFL005W DBP7P36120 742 aaKnown RBP2.55□□□□□ -2
SEC4YFL005W RFT1P38206 574 aaPredicted RBP2.55□□□□□ -2
SEC4YFL005W MIC19P43594 170 aa2.55□□□□□ -2
SEC4YFL005W GTO1P48239 356 aa2.55□□□□□ -2
SEC4YFL005W COQ5P49017 307 aa2.55□□□□□ -2
SEC4YFL005W KEL2P50090 882 aa2.55□□□□□ -2
SEC4YFL005W SWC4P53201 476 aa2.55□□□□□ -2
SEC4YFL005W FMP48P53233 369 aa2.55□□□□□ -2
SEC4YFL005W YNR066CP53752 436 aa2.55□□□□□ -2
SEC4YFL005W YPL077CQ02831 240 aa2.55□□□□□ -2
SEC4YFL005W INP1Q03694 420 aa2.55□□□□□ -2
SEC4YFL005W UTP15Q04305 513 aaKnown RBP2.55□□□□□ -2
SEC4YFL005W YLR446WQ06204 433 aa2.55□□□□□ -2
SEC4YFL005W TDH3P00359 332 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
SEC4YFL005W OM45P16547 393 aa2.54□□□□□ -2
SEC4YFL005W HPR1P17629 752 aaKnown RBP2.54□□□□□ -2
SEC4YFL005W IFM1P25038 676 aa2.54□□□□□ -2
SEC4YFL005W CSM1P25651 190 aa2.54□□□□□ -2
SEC4YFL005W YKL070WP36087 169 aa2.54□□□□□ -2
SEC4YFL005W HIS2P38635 335 aa2.54□□□□□ -2
SEC4YFL005W PEX18P38855 283 aa2.54□□□□□ -2
SEC4YFL005W YER184CP39961 794 aa2.54□□□□□ -2
SEC4YFL005W RRG9P40156 214 aa2.54□□□□□ -2
SEC4YFL005W UFE1P41834 346 aa2.54□□□□□ -2
SEC4YFL005W MPP10P47083 593 aaKnown RBP2.54□□□□□ -2
SEC4YFL005W UBC13P52490 153 aa2.54□□□□□ -2
SEC4YFL005W YGL185CP53100 379 aa2.54□□□□□ -2
SEC4YFL005W LAG2Q92325 660 aa2.54□□□□□ -2
SEC4YFL005W AUS1Q08409 1394 aa2.53□□□□□ -2
SEC4YFL005W ATP6P00854 259 aa2.53□□□□□ -2
SEC4YFL005W PPQ1P32945 549 aa2.53□□□□□ -2
SEC4YFL005W YKL063CP35725 167 aa2.53□□□□□ -2
SEC4YFL005W YPC1P38298 316 aa2.53□□□□□ -2
SEC4YFL005W RTT105P40063 208 aa2.53□□□□□ -2
SEC4YFL005W MEP1P40260 492 aa2.53□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 24 ms