RNA–Protein interactions for RNA: YER144C

UBP5, Transcript of Putative ubiquitin-specific protease, yeastyeast

Gene UBP5, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP5YER144C YPR022CQ12139 1133 aa3.05□□□□□ -1.92
UBP5YER144C HMS1Q12398 434 aa3.05□□□□□ -1.92
UBP5YER144C RPL7AP05737 244 aaKnown RBP3.04□□□□□ -1.92
UBP5YER144C GPH1P06738 902 aaKnown RBP3.04□□□□□ -1.92
UBP5YER144C YMR085WP0CF18 432 aa3.04□□□□□ -1.92
UBP5YER144C YAR066WP0CX18 203 aa3.04□□□□□ -1.92
UBP5YER144C YHR214WP0CX19 203 aa3.04□□□□□ -1.92
UBP5YER144C GCN3P14741 305 aa3.04□□□□□ -1.92
UBP5YER144C YSR3P23501 404 aa3.04□□□□□ -1.92
UBP5YER144C EMP70P32802 667 aa3.04□□□□□ -1.92
UBP5YER144C RPS1AP33442 255 aaKnown RBP3.04□□□□□ -1.92
UBP5YER144C SKT5P34226 696 aa3.04□□□□□ -1.92
UBP5YER144C SPT10P35208 640 aa3.04□□□□□ -1.92
UBP5YER144C TPO5P36029 618 aa3.04□□□□□ -1.92
UBP5YER144C BMT2P38278 337 aa3.04□□□□□ -1.92
UBP5YER144C YHR122WP38829 231 aa3.04□□□□□ -1.92
UBP5YER144C THO1P40040 218 aaKnown RBP3.04□□□□□ -1.92
UBP5YER144C LAS21P40367 830 aa3.04□□□□□ -1.92
UBP5YER144C GAT1P43574 510 aa3.04□□□□□ -1.92
UBP5YER144C COQ5P49017 307 aa3.04□□□□□ -1.92
UBP5YER144C NAS6P50086 228 aa3.04□□□□□ -1.92
UBP5YER144C IBD2P53892 351 aa3.04□□□□□ -1.92
UBP5YER144C VAC7P53950 1165 aa3.04□□□□□ -1.92
UBP5YER144C RNY1Q02933 434 aaKnown RBP3.04□□□□□ -1.92
UBP5YER144C YPL113CQ02961 396 aa3.04□□□□□ -1.92
UBP5YER144C MRPS17Q03246 237 aaPredicted RBP3.04□□□□□ -1.92
UBP5YER144C GOT1Q03554 138 aa3.04□□□□□ -1.92
UBP5YER144C MRPL1Q04599 285 aa3.04□□□□□ -1.92
UBP5YER144C IPK1Q06667 281 aa3.04□□□□□ -1.92
UBP5YER144C VPS68Q12016 184 aa3.04□□□□□ -1.92
UBP5YER144C RPL7BQ12213 244 aaKnown RBP3.04□□□□□ -1.92
UBP5YER144C RKM5Q12367 367 aa3.04□□□□□ -1.92
UBP5YER144C YPL247CQ12523 523 aa3.04□□□□□ -1.92
UBP5YER144C TDH1P00360 332 aaKnown RBP3.04□□□□□ -1.92
UBP5YER144C SPS4P09937 338 aa3.04□□□□□ -1.92
UBP5YER144C RAP1P11938 827 aa3.04□□□□□ -1.92
UBP5YER144C MGR1P25573 417 aa3.04□□□□□ -1.92
UBP5YER144C RAD14P28519 371 aa3.04□□□□□ -1.92
UBP5YER144C SOR1P35497 357 aaKnown RBP3.04□□□□□ -1.92
UBP5YER144C ASK1P35734 292 aa3.04□□□□□ -1.92
UBP5YER144C GRE3P38715 327 aaKnown RBP RIP-Chip data3.04□□□□□ -1.92not detected
UBP5YER144C EFM1P38732 585 aa3.04□□□□□ -1.92
UBP5YER144C RRP4P38792 359 aaKnown RBP3.04□□□□□ -1.92
UBP5YER144C SBE22P38814 852 aa3.04□□□□□ -1.92
UBP5YER144C LNP1P38878 278 aa3.04□□□□□ -1.92
UBP5YER144C MNL1P38888 796 aa3.04□□□□□ -1.92
UBP5YER144C BAT1P38891 393 aaKnown RBP3.04□□□□□ -1.92
UBP5YER144C DDI1P40087 428 aa3.04□□□□□ -1.92
UBP5YER144C YIL060WP40519 144 aa3.04□□□□□ -1.92
UBP5YER144C SAS2P40963 338 aa3.04□□□□□ -1.92
UBP5YER144C RPA34P47006 233 aaPredicted RBP3.04□□□□□ -1.92
UBP5YER144C BIR1P47134 954 aa3.04□□□□□ -1.92
UBP5YER144C YJR141WP47172 347 aaPredicted RBP3.04□□□□□ -1.92
UBP5YER144C YJR154WP47181 346 aa3.04□□□□□ -1.92
UBP5YER144C AIF1P52923 378 aa3.04□□□□□ -1.92
UBP5YER144C ROG1P53118 685 aa3.04□□□□□ -1.92
UBP5YER144C GTR2P53290 341 aa3.04□□□□□ -1.92
UBP5YER144C DBP6P53734 629 aaKnown RBP3.04□□□□□ -1.92
UBP5YER144C MNT4P53745 580 aa3.04□□□□□ -1.92
UBP5YER144C MPS1P54199 764 aa3.04□□□□□ -1.92
UBP5YER144C LSM3P57743 89 aaKnown RBP3.04□□□□□ -1.92
UBP5YER144C GLO2Q05584 274 aa3.04□□□□□ -1.92
UBP5YER144C ARO10Q06408 635 aa3.04□□□□□ -1.92
UBP5YER144C YLR413WQ06689 675 aa3.04□□□□□ -1.92
UBP5YER144C SOR2Q07786 357 aa3.04□□□□□ -1.92
UBP5YER144C SRO7Q12038 1033 aa3.04□□□□□ -1.92
UBP5YER144C APC9Q12107 265 aa3.04□□□□□ -1.92
UBP5YER144C MSH5Q12175 901 aa3.04□□□□□ -1.92
UBP5YER144C RRP42Q12277 265 aaPredicted RBP3.04□□□□□ -1.92
UBP5YER144C RNH203Q12338 110 aa3.04□□□□□ -1.92
UBP5YER144C MRPL23Q12487 163 aaPredicted RBP3.04□□□□□ -1.92
UBP5YER144C MDM35O60200 86 aa3.03□□□□□ -1.92
UBP5YER144C SPT3P06844 337 aa3.03□□□□□ -1.92
UBP5YER144C NFT1P0CE68 1218 aa3.03□□□□□ -1.92
UBP5YER144C RHB1P25378 209 aa3.03□□□□□ -1.92
UBP5YER144C HMX1P32339 317 aa3.03□□□□□ -1.92
UBP5YER144C YKL070WP36087 169 aa3.03□□□□□ -1.92
UBP5YER144C CAF4P36130 643 aa3.03□□□□□ -1.92
UBP5YER144C ARA1P38115 344 aa3.03□□□□□ -1.92
UBP5YER144C BNA4P38169 460 aa3.03□□□□□ -1.92
UBP5YER144C NPT1P39683 429 aaKnown RBP3.03□□□□□ -1.92
UBP5YER144C FRT2P39734 528 aa3.03□□□□□ -1.92
UBP5YER144C RMD9P53140 646 aaKnown RBP3.03□□□□□ -1.92
UBP5YER144C NOP19P53317 196 aaPredicted RBP3.03□□□□□ -1.92
UBP5YER144C CPR8P53728 308 aa3.03□□□□□ -1.92
UBP5YER144C SAM50P53969 484 aa3.03□□□□□ -1.92
UBP5YER144C MMT1Q03218 510 aa3.03□□□□□ -1.92
UBP5YER144C GAS3Q03655 524 aa3.03□□□□□ -1.92
UBP5YER144C VHS1Q03785 461 aa3.03□□□□□ -1.92
UBP5YER144C TRM12Q04235 462 aa3.03□□□□□ -1.92
UBP5YER144C EMI1Q04406 187 aa3.03□□□□□ -1.92
UBP5YER144C ATG10Q07879 167 aa3.03□□□□□ -1.92
UBP5YER144C YOL073CQ08232 322 aa3.03□□□□□ -1.92
UBP5YER144C VIK1Q12045 647 aa3.03□□□□□ -1.92
UBP5YER144C CCH1P50077 2039 aa3.03□□□□□ -1.92
UBP5YER144C UBR1P19812 1950 aa3.03□□□□□ -1.92
UBP5YER144C GAL3P13045 520 aa3.03□□□□□ -1.92
UBP5YER144C SCL1P21243 252 aaKnown RBP3.03□□□□□ -1.92
UBP5YER144C DBR1P24309 405 aaKnown RBP3.03□□□□□ -1.92
UBP5YER144C YCR101CP25607 182 aa3.03□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 29 ms