RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C TY4B-JP47024 1803 aa1.12□□□□□ -2.23
SWI4YER111C SUP35P05453 685 aaKnown RBP1.11□□□□□ -2.23
SWI4YER111C RPL23AP0CX41 137 aaKnown RBP1.11□□□□□ -2.23
SWI4YER111C RPL23BP0CX42 137 aaKnown RBP1.11□□□□□ -2.23
SWI4YER111C PET123P17558 318 aa1.11□□□□□ -2.23
SWI4YER111C FAR1P21268 830 aa1.11□□□□□ -2.23
SWI4YER111C INO2P26798 304 aa1.11□□□□□ -2.23
SWI4YER111C SPO23P33757 523 aa1.11□□□□□ -2.23
SWI4YER111C COS9P36034 407 aa1.11□□□□□ -2.23
SWI4YER111C SPT8P38915 602 aa1.11□□□□□ -2.23
SWI4YER111C BNA6P43619 295 aa1.11□□□□□ -2.23
SWI4YER111C YJR085CP47131 105 aaKnown RBP1.11□□□□□ -2.23
SWI4YER111C COS10P52924 374 aa1.11□□□□□ -2.23
SWI4YER111C SHE10P53075 577 aa1.11□□□□□ -2.23
SWI4YER111C CLD1P53264 445 aa1.11□□□□□ -2.23
SWI4YER111C MTM1P53320 366 aa1.11□□□□□ -2.23
SWI4YER111C SED5Q01590 340 aa1.11□□□□□ -2.23
SWI4YER111C SPP2Q02521 185 aa1.11□□□□□ -2.23
SWI4YER111C YMR317WQ04893 1140 aa1.11□□□□□ -2.23
SWI4YER111C RIF2Q06208 395 aa1.11□□□□□ -2.23
SWI4YER111C GPN3Q06543 272 aa1.11□□□□□ -2.23
SWI4YER111C ASR1Q06834 288 aa1.11□□□□□ -2.23
SWI4YER111C SGT2Q12118 346 aaKnown RBP1.11□□□□□ -2.23
SWI4YER111C UTP23Q12339 254 aaKnown RBP1.11□□□□□ -2.23
SWI4YER111C IZH2Q12442 317 aa1.11□□□□□ -2.23
SWI4YER111C MHP1P43638 1398 aa1.11□□□□□ -2.23
SWI4YER111C ILV1P00927 576 aaKnown RBP1.11□□□□□ -2.23
SWI4YER111C HEM4P06174 275 aa1.11□□□□□ -2.23
SWI4YER111C IME2P32581 645 aa1.11□□□□□ -2.23
SWI4YER111C YBR241CP38142 488 aa1.11□□□□□ -2.23
SWI4YER111C HSM3P38348 480 aa1.11□□□□□ -2.23
SWI4YER111C HIS2P38635 335 aa1.11□□□□□ -2.23
SWI4YER111C TCD1P38756 429 aa1.11□□□□□ -2.23
SWI4YER111C PFS1P38872 237 aa1.11□□□□□ -2.23
SWI4YER111C YNL134CP53912 376 aaKnown RBP1.11□□□□□ -2.23
SWI4YER111C TY3A-GQ12173 290 aa1.11□□□□□ -2.23
SWI4YER111C PRP46Q12417 451 aaPredicted RBP1.11□□□□□ -2.23
SWI4YER111C TY3A-IQ99219 290 aa1.11□□□□□ -2.23
SWI4YER111C FAS2P19097 1887 aaKnown RBP1.11□□□□□ -2.23
SWI4YER111C RPS8AP0CX39 200 aaKnown RBP1.11□□□□□ -2.23
SWI4YER111C RPS8BP0CX40 200 aaKnown RBP1.11□□□□□ -2.23
SWI4YER111C RSR1P13856 272 aa1.11□□□□□ -2.23
SWI4YER111C URA10P30402 227 aa1.11□□□□□ -2.23
SWI4YER111C COY1P34237 679 aa1.11□□□□□ -2.23
SWI4YER111C KTI12P34253 313 aaKnown RBP1.11□□□□□ -2.23
SWI4YER111C FMP46P36141 133 aaKnown RBP1.11□□□□□ -2.23
SWI4YER111C PEX32P38292 413 aa1.11□□□□□ -2.23
SWI4YER111C OXA1P39952 402 aa1.11□□□□□ -2.23
SWI4YER111C IDP2P41939 412 aa1.11□□□□□ -2.23
SWI4YER111C EGT2P42835 1041 aa1.11□□□□□ -2.23
SWI4YER111C YGR210CP42942 411 aa1.11□□□□□ -2.23
SWI4YER111C LSG1P53145 640 aaKnown RBP1.11□□□□□ -2.23
SWI4YER111C MST27P53176 234 aa1.11□□□□□ -2.23
SWI4YER111C CPD1P53314 239 aa1.11□□□□□ -2.23
SWI4YER111C COS1P53822 381 aa1.11□□□□□ -2.23
SWI4YER111C TRM82Q03774 444 aa1.11□□□□□ -2.23
SWI4YER111C SNX41Q04053 625 aa1.11□□□□□ -2.23
SWI4YER111C RTT103Q05543 409 aa1.11□□□□□ -2.23
SWI4YER111C BER1Q06688 274 aaKnown RBP1.11□□□□□ -2.23
SWI4YER111C BSC6Q08280 497 aa1.11□□□□□ -2.23
SWI4YER111C UTP10P42945 1769 aaKnown RBP1.1□□□□□ -2.23
SWI4YER111C DCC1P25559 380 aa1.1□□□□□ -2.23
SWI4YER111C ERG9P29704 444 aa1.1□□□□□ -2.23
SWI4YER111C YCH1P42937 148 aa1.1□□□□□ -2.23
SWI4YER111C YFL040WP43562 540 aa1.1□□□□□ -2.23
SWI4YER111C CIN2P46670 268 aa1.1□□□□□ -2.23
SWI4YER111C NUP84P52891 726 aa1.1□□□□□ -2.23
SWI4YER111C SHY1P53266 389 aa1.1□□□□□ -2.23
SWI4YER111C MKC7P53379 596 aa1.1□□□□□ -2.23
SWI4YER111C YDR115WQ04598 105 aa1.1□□□□□ -2.23
SWI4YER111C GMC2Q06201 188 aa1.1□□□□□ -2.23
SWI4YER111C IRC25Q07951 179 aa1.1□□□□□ -2.23
SWI4YER111C RBD2Q12270 262 aa1.1□□□□□ -2.23
SWI4YER111C MED4Q12343 284 aa1.1□□□□□ -2.23
SWI4YER111C RPL16BP26785 198 aaKnown RBP1.1□□□□□ -2.23
SWI4YER111C IES6P32617 166 aa1.1□□□□□ -2.23
SWI4YER111C YKL063CP35725 167 aa1.1□□□□□ -2.23
SWI4YER111C YKR015CP36111 568 aa1.1□□□□□ -2.23
SWI4YER111C KRE9P39005 276 aa1.1□□□□□ -2.23
SWI4YER111C AGP3P43548 558 aa1.1□□□□□ -2.23
SWI4YER111C MOB2P43563 287 aa1.1□□□□□ -2.23
SWI4YER111C SLT2Q00772 484 aa1.1□□□□□ -2.23
SWI4YER111C ELP3Q02908 557 aaKnown RBP1.1□□□□□ -2.23
SWI4YER111C YLR173WQ06247 608 aa1.1□□□□□ -2.23
SWI4YER111C CTS2Q06350 511 aa1.1□□□□□ -2.23
SWI4YER111C CMS1Q07897 291 aaKnown RBP1.1□□□□□ -2.23
SWI4YER111C FRE8Q12209 686 aa1.1□□□□□ -2.23
SWI4YER111C RPL21BQ12672 160 aaKnown RBP1.1□□□□□ -2.23
SWI4YER111C REP1P03871 373 aa1.09□□□□□ -2.23
SWI4YER111C MSS116P15424 664 aaKnown RBP1.09□□□□□ -2.23
SWI4YER111C RNA14P25298 677 aaKnown RBP1.09□□□□□ -2.23
SWI4YER111C SRB4P32569 687 aa1.09□□□□□ -2.23
SWI4YER111C SOL2P37262 315 aa1.09□□□□□ -2.23
SWI4YER111C YHR035WP38769 630 aa1.09□□□□□ -2.23
SWI4YER111C SCC4P40090 624 aa1.09□□□□□ -2.23
SWI4YER111C INA22P40576 216 aa1.09□□□□□ -2.23
SWI4YER111C STB1P42845 420 aa1.09□□□□□ -2.23
SWI4YER111C AIM23P47015 356 aa1.09□□□□□ -2.23
SWI4YER111C CDH1P53197 566 aa1.09□□□□□ -2.23
SWI4YER111C SWC4P53201 476 aa1.09□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms