RNA–Protein interactions for RNA: YGR058W

PEF1, Transcript of Penta-EF-hand protein, yeastyeast

Gene PEF1, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEF1YGR058W SSC1P0CS90 654 aaKnown RBP2.87□□□□□ -1.95
PEF1YGR058W MSI1P13712 422 aa2.87□□□□□ -1.95
PEF1YGR058W AAT2P23542 418 aaKnown RBP2.87□□□□□ -1.95
PEF1YGR058W ERG3P32353 365 aa2.87□□□□□ -1.95
PEF1YGR058W URA8P38627 578 aaPredicted RBP2.87□□□□□ -1.95
PEF1YGR058W RRP4P38792 359 aaKnown RBP2.87□□□□□ -1.95
PEF1YGR058W LIN1P38852 340 aaPredicted RBP2.87□□□□□ -1.95
PEF1YGR058W SEO1P39709 593 aa2.87□□□□□ -1.95
PEF1YGR058W BTT1P40314 149 aaPredicted RBP2.87□□□□□ -1.95
PEF1YGR058W LIA1P47120 325 aaKnown RBP2.87□□□□□ -1.95
PEF1YGR058W BIR1P47134 954 aa2.87□□□□□ -1.95
PEF1YGR058W TAF6P53040 516 aa2.87□□□□□ -1.95
PEF1YGR058W BIO4P53630 237 aa2.87□□□□□ -1.95
PEF1YGR058W ARX1Q03862 593 aaKnown RBP2.87□□□□□ -1.95
PEF1YGR058W YLR012CQ07927 99 aa2.87□□□□□ -1.95
PEF1YGR058W RAX1Q08760 435 aa2.87□□□□□ -1.95
PEF1YGR058W YPQ1Q12010 308 aa2.87□□□□□ -1.95
PEF1YGR058W YLR053CQ12026 108 aa2.87□□□□□ -1.95
PEF1YGR058W OCA6Q12454 224 aa2.87□□□□□ -1.95
PEF1YGR058W AFI1Q99222 893 aa2.87□□□□□ -1.95
PEF1YGR058W CCH1P50077 2039 aa2.86□□□□□ -1.95
PEF1YGR058W GCY1P14065 312 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
PEF1YGR058W RED1P14291 827 aa2.86□□□□□ -1.95
PEF1YGR058W CLB1P24868 471 aa2.86□□□□□ -1.95
PEF1YGR058W CLB3P24870 427 aa2.86□□□□□ -1.95
PEF1YGR058W YCL068CP25593 260 aa2.86□□□□□ -1.95
PEF1YGR058W PHA2P32452 334 aa2.86□□□□□ -1.95
PEF1YGR058W CYM1P32898 989 aa2.86□□□□□ -1.95
PEF1YGR058W PEX5P35056 612 aa2.86□□□□□ -1.95
PEF1YGR058W HEK2P38199 381 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95 RIP-Chip
PEF1YGR058W NTC20P38302 140 aaPredicted RBP2.86□□□□□ -1.95
PEF1YGR058W ATG12P38316 186 aa2.86□□□□□ -1.95
PEF1YGR058W HSM3P38348 480 aa2.86□□□□□ -1.95
PEF1YGR058W YHI9P38765 294 aa2.86□□□□□ -1.95
PEF1YGR058W OXA1P39952 402 aa2.86□□□□□ -1.95
PEF1YGR058W PEP8P40335 379 aa2.86□□□□□ -1.95
PEF1YGR058W UFE1P41834 346 aa2.86□□□□□ -1.95
PEF1YGR058W ASN2P49090 572 aaKnown RBP2.86□□□□□ -1.95
PEF1YGR058W MRM2P53123 320 aa2.86□□□□□ -1.95
PEF1YGR058W RCF2P53721 224 aa2.86□□□□□ -1.95
PEF1YGR058W TRM112P53738 135 aaPredicted RBP2.86□□□□□ -1.95
PEF1YGR058W SUB1P54000 292 aaKnown RBP2.86□□□□□ -1.95
PEF1YGR058W VHS1Q03785 461 aa2.86□□□□□ -1.95
PEF1YGR058W TAF11Q04226 346 aa2.86□□□□□ -1.95
PEF1YGR058W CDC123Q05791 360 aa2.86□□□□□ -1.95
PEF1YGR058W NDE2Q07500 545 aa2.86□□□□□ -1.95
PEF1YGR058W CMS1Q07897 291 aaKnown RBP2.86□□□□□ -1.95
PEF1YGR058W PGC1Q08959 321 aa2.86□□□□□ -1.95
PEF1YGR058W TPT1Q12272 230 aaKnown RBP2.86□□□□□ -1.95
PEF1YGR058W LDB17Q12342 491 aa2.86□□□□□ -1.95
PEF1YGR058W SEC14P24280 304 aaKnown RBP2.85□□□□□ -1.95
PEF1YGR058W RIM1P32445 135 aaKnown RBP2.85□□□□□ -1.95
PEF1YGR058W YME2P32843 850 aa2.85□□□□□ -1.95
PEF1YGR058W SGE1P33335 543 aa2.85□□□□□ -1.95
PEF1YGR058W COY1P34237 679 aa2.85□□□□□ -1.95
PEF1YGR058W COX14P39103 70 aa2.85□□□□□ -1.95
PEF1YGR058W NDE1P40215 560 aa2.85□□□□□ -1.95
PEF1YGR058W SEC28P40509 296 aaKnown RBP2.85□□□□□ -1.95
PEF1YGR058W YFR057WP43625 151 aa2.85□□□□□ -1.95
PEF1YGR058W BUD13P46947 266 aaPredicted RBP2.85□□□□□ -1.95
PEF1YGR058W TRF5P48561 642 aaKnown RBP2.85□□□□□ -1.95
PEF1YGR058W PRP24P49960 444 aaKnown RBP2.85□□□□□ -1.95
PEF1YGR058W BNS1P50084 137 aa2.85□□□□□ -1.95
PEF1YGR058W CDC14Q00684 551 aa2.85□□□□□ -1.95
PEF1YGR058W YMR209CQ03648 457 aa2.85□□□□□ -1.95
PEF1YGR058W RTN1Q04947 295 aaKnown RBP2.85□□□□□ -1.95
PEF1YGR058W LDB18Q07887 179 aa2.85□□□□□ -1.95
PEF1YGR058W NOT5Q12514 560 aaPredicted RBP2.85□□□□□ -1.95
PEF1YGR058W YMR030W-AQ3E760 96 aa2.85□□□□□ -1.95
PEF1YGR058W RGS2Q99188 309 aa2.85□□□□□ -1.95
PEF1YGR058W STE2D6VTK4 431 aa2.84□□□□□ -1.95
PEF1YGR058W RPB5P20434 215 aa2.84□□□□□ -1.95
PEF1YGR058W MRPL8P22353 238 aa2.84□□□□□ -1.95
PEF1YGR058W AEP1P32493 518 aa2.84□□□□□ -1.95
PEF1YGR058W IES6P32617 166 aa2.84□□□□□ -1.95
PEF1YGR058W RRN10P38204 145 aa2.84□□□□□ -1.95
PEF1YGR058W PHO89P38361 574 aa2.84□□□□□ -1.95
PEF1YGR058W YHR182WP38870 785 aa2.84□□□□□ -1.95
PEF1YGR058W YDR089WP38966 869 aa2.84□□□□□ -1.95
PEF1YGR058W SIM1P40472 476 aa2.84□□□□□ -1.95
PEF1YGR058W EGT2P42835 1041 aa2.84□□□□□ -1.95
PEF1YGR058W TIM13P53299 105 aa2.84□□□□□ -1.95
PEF1YGR058W MRPS16Q02608 121 aa2.84□□□□□ -1.95
PEF1YGR058W CCE1Q03702 353 aa2.84□□□□□ -1.95
PEF1YGR058W FMN1Q03778 218 aa2.84□□□□□ -1.95
PEF1YGR058W SPC24Q04477 213 aa2.84□□□□□ -1.95
PEF1YGR058W SNT309Q06091 175 aaPredicted RBP2.84□□□□□ -1.95
PEF1YGR058W YLR177WQ06251 628 aa2.84□□□□□ -1.95
PEF1YGR058W YPL225WQ08971 146 aaKnown RBP2.84□□□□□ -1.95
PEF1YGR058W YGK3Q12222 375 aaPredicted RBP2.84□□□□□ -1.95
PEF1YGR058W ATG34Q12292 412 aa2.84□□□□□ -1.95
PEF1YGR058W RAD3P06839 778 aa2.83□□□□□ -1.96
PEF1YGR058W RNA1P11745 407 aaKnown RBP2.83□□□□□ -1.96
PEF1YGR058W SCH9P11792 824 aaKnown RBP2.83□□□□□ -1.96
PEF1YGR058W ARF2P19146 181 aaKnown RBP2.83□□□□□ -1.96
PEF1YGR058W DCC1P25559 380 aa2.83□□□□□ -1.96
PEF1YGR058W PEX34P25584 144 aa2.83□□□□□ -1.96
PEF1YGR058W MRPL40P36534 297 aa2.83□□□□□ -1.96
PEF1YGR058W YHB1P39676 399 aaKnown RBP2.83□□□□□ -1.96
PEF1YGR058W HEM14P40012 539 aa2.83□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms