RNA–Protein interactions for RNA: YDR218C

SPR28, Transcript of Sporulation-specific homolog of the CDC3/10/11/12 family of genes, yeast

Gene SPR28, Length 1,272 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPR28	YDR218C	GIM4	P40005	111 aa	Known RBP	4.17	□□□□□ -1.74
SPR28	YDR218C	YIL060W	P40519	144 aa		4.17	□□□□□ -1.74
SPR28	YDR218C	LSM1	P47017	172 aa	Known RBP	4.17	□□□□□ -1.74
SPR28	YDR218C	LST7	P53237	242 aa		4.17	□□□□□ -1.74
SPR28	YDR218C	EAF7	P53911	425 aa	Known RBP	4.17	□□□□□ -1.74
SPR28	YDR218C	SPR6	Q01684	191 aa		4.17	□□□□□ -1.74
SPR28	YDR218C	BET5	Q03630	159 aa		4.17	□□□□□ -1.74
SPR28	YDR218C	GLO2	Q05584	274 aa		4.17	□□□□□ -1.74
SPR28	YDR218C	SEC10	Q06245	871 aa		4.17	□□□□□ -1.74
SPR28	YDR218C	SKI7	Q08491	747 aa	Predicted RBP	4.17	□□□□□ -1.74
SPR28	YDR218C	CSM4	Q08955	156 aa		4.17	□□□□□ -1.74
SPR28	YDR218C	YDL109C	Q12103	647 aa		4.17	□□□□□ -1.74
SPR28	YDR218C	RPL7B	Q12213	244 aa	Known RBP	4.17	□□□□□ -1.74
SPR28	YDR218C	TUS1	Q06412	1307 aa		4.17	□□□□□ -1.74
SPR28	YDR218C	PGK1	P00560	416 aa	Known RBP	4.16	□□□□□ -1.74
SPR28	YDR218C	YAR066W	P0CX18	203 aa		4.16	□□□□□ -1.74
SPR28	YDR218C	YHR214W	P0CX19	203 aa		4.16	□□□□□ -1.74
SPR28	YDR218C	VPH2	P32341	215 aa		4.16	□□□□□ -1.74
SPR28	YDR218C	LOS1	P33418	1100 aa	Predicted RBP	4.16	□□□□□ -1.74
SPR28	YDR218C	MRX3	P38172	270 aa		4.16	□□□□□ -1.74
SPR28	YDR218C	IST2	P38250	946 aa		4.16	□□□□□ -1.74
SPR28	YDR218C	YHR035W	P38769	630 aa		4.16	□□□□□ -1.74
SPR28	YDR218C	VAB2	P40003	282 aa		4.16	□□□□□ -1.74
SPR28	YDR218C	SOK1	P40317	901 aa		4.16	□□□□□ -1.74
SPR28	YDR218C	TDA10	P42938	290 aa		4.16	□□□□□ -1.74
SPR28	YDR218C	RTT101	P47050	842 aa		4.16	□□□□□ -1.74
SPR28	YDR218C	YJR149W	P47177	404 aa		4.16	□□□□□ -1.74
SPR28	YDR218C	YIP1	P53039	248 aa		4.16	□□□□□ -1.74
SPR28	YDR218C	SOL4	P53315	255 aa		4.16	□□□□□ -1.74
SPR28	YDR218C	MTQ1	P53944	314 aa		4.16	□□□□□ -1.74
SPR28	YDR218C	RHO4	Q00246	291 aa		4.16	□□□□□ -1.74
SPR28	YDR218C	CTF19	Q02732	369 aa		4.16	□□□□□ -1.74
SPR28	YDR218C	CTR3	Q06686	241 aa		4.16	□□□□□ -1.74
SPR28	YDR218C	YDL218W	Q07629	317 aa		4.16	□□□□□ -1.74
SPR28	YDR218C	JLP1	Q12358	412 aa		4.16	□□□□□ -1.74
SPR28	YDR218C	QCR7	P00128	127 aa		4.15	□□□□□ -1.75
SPR28	YDR218C	SUC2	P00724	532 aa		4.15	□□□□□ -1.75
SPR28	YDR218C	RPL28	P02406	149 aa	Known RBP	4.15	□□□□□ -1.75
SPR28	YDR218C	HEM1	P09950	548 aa	Predicted RBP	4.15	□□□□□ -1.75
SPR28	YDR218C	AMD1	P15274	810 aa	Known RBP	4.15	□□□□□ -1.75
SPR28	YDR218C	RPO26	P20435	155 aa		4.15	□□□□□ -1.75
SPR28	YDR218C	LSB5	P25369	354 aa		4.15	□□□□□ -1.75
SPR28	YDR218C	ATO2	P32907	282 aa		4.15	□□□□□ -1.75
SPR28	YDR218C	YCR041W	P37265	110 aa		4.15	□□□□□ -1.75
SPR28	YDR218C	IKI1	P38874	309 aa		4.15	□□□□□ -1.75
SPR28	YDR218C	CCT4	P39078	528 aa	Known RBP	4.15	□□□□□ -1.75
SPR28	YDR218C	VRG4	P40107	337 aa		4.15	□□□□□ -1.75
SPR28	YDR218C	PRE6	P40303	254 aa	Known RBP	4.15	□□□□□ -1.75
SPR28	YDR218C	POG1	P40473	351 aa		4.15	□□□□□ -1.75
SPR28	YDR218C	XBP1	P40489	647 aa		4.15	□□□□□ -1.75
SPR28	YDR218C	CDC1	P40986	491 aa		4.15	□□□□□ -1.75
SPR28	YDR218C	GAB1	P41733	394 aa		4.15	□□□□□ -1.75
SPR28	YDR218C	KEG1	P43614	200 aa		4.15	□□□□□ -1.75
SPR28	YDR218C	YJL043W	P47053	257 aa		4.15	□□□□□ -1.75
SPR28	YDR218C	HOC1	P47124	396 aa		4.15	□□□□□ -1.75
SPR28	YDR218C	VEL1	P53058	206 aa		4.15	□□□□□ -1.75
SPR28	YDR218C	HCH1	P53834	153 aa		4.15	□□□□□ -1.75
SPR28	YDR218C	CAC2	Q04199	468 aa		4.15	□□□□□ -1.75
SPR28	YDR218C	ARP10	Q04549	284 aa		4.15	□□□□□ -1.75
SPR28	YDR218C	SWF1	Q04629	336 aa		4.15	□□□□□ -1.75
SPR28	YDR218C	PLB3	Q08108	686 aa		4.15	□□□□□ -1.75
SPR28	YDR218C	GRE1	Q08969	168 aa		4.15	□□□□□ -1.75
SPR28	YDR218C	TMS1	Q12116	473 aa		4.15	□□□□□ -1.75
SPR28	YDR218C	RIO1	Q12196	484 aa	Known RBP	4.15	□□□□□ -1.75
SPR28	YDR218C	RRP42	Q12277	265 aa	Predicted RBP	4.15	□□□□□ -1.75
SPR28	YDR218C	NCA2	Q12374	616 aa		4.15	□□□□□ -1.75
SPR28	YDR218C	MEX67	Q99257	599 aa	Known RBP	4.15	□□□□□ -1.75
SPR28	YDR218C	YCR007C	P25354	239 aa		4.14	□□□□□ -1.75
SPR28	YDR218C	BUB3	P26449	341 aa		4.14	□□□□□ -1.75
SPR28	YDR218C	SPO23	P33757	523 aa		4.14	□□□□□ -1.75
SPR28	YDR218C	TAF14	P35189	244 aa		4.14	□□□□□ -1.75
SPR28	YDR218C	SEO1	P39709	593 aa		4.14	□□□□□ -1.75
SPR28	YDR218C	YJR012C	P47087	207 aa		4.14	□□□□□ -1.75
SPR28	YDR218C	YJR030C	P47101	745 aa		4.14	□□□□□ -1.75
SPR28	YDR218C	SWC4	P53201	476 aa		4.14	□□□□□ -1.75
SPR28	YDR218C	FRE4	P53746	719 aa		4.14	□□□□□ -1.75
SPR28	YDR218C	ASI1	P54074	624 aa		4.14	□□□□□ -1.75
SPR28	YDR218C	RGT2	Q12300	763 aa		4.14	□□□□□ -1.75
SPR28	YDR218C	SNU23	Q12368	194 aa	Predicted RBP	4.14	□□□□□ -1.75
SPR28	YDR218C	SEC3	P33332	1336 aa	Known RBP	4.14	□□□□□ -1.75
SPR28	YDR218C	FAR1	P21268	830 aa		4.13	□□□□□ -1.75
SPR28	YDR218C	RFA3	P26755	122 aa	Known RBP	4.13	□□□□□ -1.75
SPR28	YDR218C	RPL16B	P26785	198 aa	Known RBP	4.13	□□□□□ -1.75
SPR28	YDR218C	MKK1	P32490	508 aa		4.13	□□□□□ -1.75
SPR28	YDR218C	MRPL6	P32904	214 aa		4.13	□□□□□ -1.75
SPR28	YDR218C	YOX1	P34161	385 aa		4.13	□□□□□ -1.75
SPR28	YDR218C	MCR1	P36060	302 aa	Known RBP	4.13	□□□□□ -1.75
SPR28	YDR218C	CAF4	P36130	643 aa		4.13	□□□□□ -1.75
SPR28	YDR218C	SLM1	P40485	686 aa		4.13	□□□□□ -1.75
SPR28	YDR218C	ASG7	P46993	209 aa		4.13	□□□□□ -1.75
SPR28	YDR218C	USE1	P53146	245 aa		4.13	□□□□□ -1.75
SPR28	YDR218C	YGL082W	P53155	381 aa		4.13	□□□□□ -1.75
SPR28	YDR218C	SKI8	Q02793	397 aa	Predicted RBP	4.13	□□□□□ -1.75
SPR28	YDR218C	CTL1	Q03220	320 aa	Known RBP	4.13	□□□□□ -1.75
SPR28	YDR218C	VBA1	Q04301	562 aa		4.13	□□□□□ -1.75
SPR28	YDR218C	ALE1	Q08548	619 aa		4.13	□□□□□ -1.75
SPR28	YDR218C	SRL2	Q12020	392 aa		4.13	□□□□□ -1.75
SPR28	YDR218C	TPT1	Q12272	230 aa	Known RBP	4.13	□□□□□ -1.75
SPR28	YDR218C	ORT1	Q12375	292 aa		4.13	□□□□□ -1.75
SPR28	YDR218C	POM152	P39685	1337 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms