RNA–Protein interactions for RNA: YBL024W

NCL1, Transcript of S-adenosyl-L-methionine-dependent tRNA: m5C-methyltransferase, yeast

Gene NCL1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCL1	YBL024W	HCH1	P53834	153 aa		1.87	□□□□□ -2.11
NCL1	YBL024W	SCS7	Q03529	384 aa		1.87	□□□□□ -2.11
NCL1	YBL024W	YMR027W	Q04371	470 aa		1.87	□□□□□ -2.11
NCL1	YBL024W	GAS2	Q06135	555 aa		1.87	□□□□□ -2.11
NCL1	YBL024W	SLF1	Q12034	447 aa	Known RBP	1.87	□□□□□ -2.11
NCL1	YBL024W	LDB17	Q12342	491 aa		1.87	□□□□□ -2.11
NCL1	YBL024W	HMS1	Q12398	434 aa		1.87	□□□□□ -2.11
NCL1	YBL024W	FMP16	Q12497	93 aa		1.87	□□□□□ -2.11
NCL1	YBL024W	RAD7	P06779	565 aa		1.86	□□□□□ -2.11
NCL1	YBL024W	SSA3	P09435	649 aa	Known RBP	1.86	□□□□□ -2.11
NCL1	YBL024W	REV1	P12689	985 aa		1.86	□□□□□ -2.11
NCL1	YBL024W	UNG1	P12887	359 aa		1.86	□□□□□ -2.11
NCL1	YBL024W	SPS100	P13130	326 aa		1.86	□□□□□ -2.11
NCL1	YBL024W	CSM1	P25651	190 aa		1.86	□□□□□ -2.11
NCL1	YBL024W	CDC50	P25656	391 aa		1.86	□□□□□ -2.11
NCL1	YBL024W	MEI5	P32489	222 aa		1.86	□□□□□ -2.11
NCL1	YBL024W	NUP2	P32499	720 aa		1.86	□□□□□ -2.11
NCL1	YBL024W	ZRT1	P32804	376 aa		1.86	□□□□□ -2.11
NCL1	YBL024W	PEX18	P38855	283 aa		1.86	□□□□□ -2.11
NCL1	YBL024W	FHL1	P39521	936 aa		1.86	□□□□□ -2.11
NCL1	YBL024W	GAB1	P41733	394 aa		1.86	□□□□□ -2.11
NCL1	YBL024W	SEH1	P53011	349 aa	Known RBP	1.86	□□□□□ -2.11
NCL1	YBL024W	CDH1	P53197	566 aa		1.86	□□□□□ -2.11
NCL1	YBL024W	CWC22	P53333	577 aa	Known RBP	1.86	□□□□□ -2.11
NCL1	YBL024W	YNL260C	P53846	198 aa		1.86	□□□□□ -2.11
NCL1	YBL024W	YNL050C	P53952	270 aa		1.86	□□□□□ -2.11
NCL1	YBL024W	IRC4	Q03036	179 aa		1.86	□□□□□ -2.11
NCL1	YBL024W	ENT5	Q03769	411 aa	Known RBP	1.86	□□□□□ -2.11
NCL1	YBL024W	LIP2	Q06005	328 aa		1.86	□□□□□ -2.11
NCL1	YBL024W	KAP95	Q06142	861 aa	Known RBP	1.86	□□□□□ -2.11
NCL1	YBL024W	YLR177W	Q06251	628 aa		1.86	□□□□□ -2.11
NCL1	YBL024W	YPQ1	Q12010	308 aa		1.86	□□□□□ -2.11
NCL1	YBL024W	SIA1	Q12212	622 aa		1.86	□□□□□ -2.11
NCL1	YBL024W	TDH1	P00360	332 aa	Known RBP	1.86	□□□□□ -2.11
NCL1	YBL024W	PRB1	P09232	635 aa		1.86	□□□□□ -2.11
NCL1	YBL024W	CMK2	P22517	447 aa		1.86	□□□□□ -2.11
NCL1	YBL024W	LDS1	P31379	325 aa		1.86	□□□□□ -2.11
NCL1	YBL024W	MRPL37	P36532	105 aa		1.86	□□□□□ -2.11
NCL1	YBL024W	OM14	P38325	134 aa		1.86	□□□□□ -2.11
NCL1	YBL024W	YJR054W	P47114	497 aa		1.86	□□□□□ -2.11
NCL1	YBL024W	BIO3	P50277	480 aa		1.86	□□□□□ -2.11
NCL1	YBL024W	SLT2	Q00772	484 aa		1.86	□□□□□ -2.11
NCL1	YBL024W	YLR012C	Q07927	99 aa		1.86	□□□□□ -2.11
NCL1	YBL024W	RDL2	Q08742	149 aa	Known RBP	1.86	□□□□□ -2.11
NCL1	YBL024W	WTM1	Q12363	437 aa	Known RBP	1.86	□□□□□ -2.11
NCL1	YBL024W	RPT5	P33297	434 aa	Known RBP	1.85	□□□□□ -2.11
NCL1	YBL024W	YMR262W	P38430	313 aa		1.85	□□□□□ -2.11
NCL1	YBL024W	WSC4	P38739	605 aa		1.85	□□□□□ -2.11
NCL1	YBL024W	YHR035W	P38769	630 aa		1.85	□□□□□ -2.11
NCL1	YBL024W	CHL4	P38907	458 aa		1.85	□□□□□ -2.11
NCL1	YBL024W	SCC4	P40090	624 aa		1.85	□□□□□ -2.11
NCL1	YBL024W	PMT4	P46971	762 aa		1.85	□□□□□ -2.11
NCL1	YBL024W	FMP33	P46998	180 aa		1.85	□□□□□ -2.11
NCL1	YBL024W	COX16	P47081	118 aa		1.85	□□□□□ -2.11
NCL1	YBL024W	BCP1	Q06338	283 aa		1.85	□□□□□ -2.11
NCL1	YBL024W	YLL007C	Q07799	665 aa		1.85	□□□□□ -2.11
NCL1	YBL024W	RRT8	Q08219	342 aa		1.85	□□□□□ -2.11
NCL1	YBL024W	APC9	Q12107	265 aa		1.85	□□□□□ -2.11
NCL1	YBL024W	PRP46	Q12417	451 aa	Predicted RBP	1.85	□□□□□ -2.11
NCL1	YBL024W	FRS2	P15625	503 aa	Known RBP	1.84	□□□□□ -2.11
NCL1	YBL024W	ZRC1	P20107	442 aa		1.84	□□□□□ -2.11
NCL1	YBL024W	SPR1	P32603	445 aa		1.84	□□□□□ -2.11
NCL1	YBL024W	YEL045C	P32616	141 aa		1.84	□□□□□ -2.11
NCL1	YBL024W	HIS2	P38635	335 aa		1.84	□□□□□ -2.11
NCL1	YBL024W	CTM1	P38818	585 aa		1.84	□□□□□ -2.11
NCL1	YBL024W	PGU1	P47180	361 aa		1.84	□□□□□ -2.11
NCL1	YBL024W	YGR015C	P53208	328 aa		1.84	□□□□□ -2.11
NCL1	YBL024W	TPC1	P53257	314 aa		1.84	□□□□□ -2.11
NCL1	YBL024W	YGR266W	P53326	701 aa		1.84	□□□□□ -2.11
NCL1	YBL024W	CSI1	Q04368	295 aa		1.84	□□□□□ -2.11
NCL1	YBL024W	FAR10	Q06001	478 aa		1.84	□□□□□ -2.11
NCL1	YBL024W	TMC1	Q08422	150 aa	Predicted RBP	1.84	□□□□□ -2.11
NCL1	YBL024W	RPL31A	P0C2H8	113 aa	Known RBP	1.84	□□□□□ -2.12
NCL1	YBL024W	CTA1	P15202	515 aa		1.84	□□□□□ -2.12
NCL1	YBL024W	ICL1	P28240	557 aa	Predicted RBP	1.84	□□□□□ -2.12
NCL1	YBL024W	URA10	P30402	227 aa		1.84	□□□□□ -2.12
NCL1	YBL024W	DEP1	P31385	405 aa		1.84	□□□□□ -2.12
NCL1	YBL024W	PDC2	P32896	925 aa		1.84	□□□□□ -2.12
NCL1	YBL024W	YUH1	P35127	236 aa		1.84	□□□□□ -2.12
NCL1	YBL024W	TPO5	P36029	618 aa		1.84	□□□□□ -2.12
NCL1	YBL024W	COS9	P36034	407 aa		1.84	□□□□□ -2.12
NCL1	YBL024W	SWD2	P36104	329 aa	Predicted RBP	1.84	□□□□□ -2.12
NCL1	YBL024W	YBR241C	P38142	488 aa		1.84	□□□□□ -2.12
NCL1	YBL024W	SHE1	P38200	338 aa		1.84	□□□□□ -2.12
NCL1	YBL024W	EMC2	P47133	292 aa	Known RBP	1.84	□□□□□ -2.12
NCL1	YBL024W	SED5	Q01590	340 aa		1.84	□□□□□ -2.12
NCL1	YBL024W	SNX41	Q04053	625 aa		1.84	□□□□□ -2.12
NCL1	YBL024W	ATP6	P00854	259 aa		1.83	□□□□□ -2.12
NCL1	YBL024W	STE7	P06784	515 aa		1.83	□□□□□ -2.12
NCL1	YBL024W	KTI12	P34253	313 aa	Known RBP	1.83	□□□□□ -2.12
NCL1	YBL024W	SOL2	P37262	315 aa		1.83	□□□□□ -2.12
NCL1	YBL024W	YPC1	P38298	316 aa		1.83	□□□□□ -2.12
NCL1	YBL024W	RCK1	P38622	512 aa		1.83	□□□□□ -2.12
NCL1	YBL024W	PET8	P38921	284 aa		1.83	□□□□□ -2.12
NCL1	YBL024W	AGP3	P43548	558 aa		1.83	□□□□□ -2.12
NCL1	YBL024W	IGD1	P43598	195 aa		1.83	□□□□□ -2.12
NCL1	YBL024W	SHE10	P53075	577 aa		1.83	□□□□□ -2.12
NCL1	YBL024W	MPP6	P53725	186 aa	Predicted RBP	1.83	□□□□□ -2.12
NCL1	YBL024W	RMI1	Q02685	241 aa		1.83	□□□□□ -2.12
NCL1	YBL024W	YDR115W	Q04598	105 aa		1.83	□□□□□ -2.12

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms