RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W ECM8P38246 354 aa1.84□□□□□ -2.11
SNC1YAL030W HIS2P38635 335 aa1.84□□□□□ -2.11
SNC1YAL030W SCC4P40090 624 aa1.84□□□□□ -2.11
SNC1YAL030W EGT2P42835 1041 aa1.84□□□□□ -2.11
SNC1YAL030W AGP3P43548 558 aa1.84□□□□□ -2.11
SNC1YAL030W MOB2P43563 287 aa1.84□□□□□ -2.11
SNC1YAL030W ATG18P43601 500 aa1.84□□□□□ -2.11
SNC1YAL030W YFR057WP43625 151 aa1.84□□□□□ -2.11
SNC1YAL030W YAR1P46683 200 aa1.84□□□□□ -2.11
SNC1YAL030W LIA1P47120 325 aaKnown RBP1.84□□□□□ -2.11
SNC1YAL030W BNS1P50084 137 aa1.84□□□□□ -2.11
SNC1YAL030W SEH1P53011 349 aaKnown RBP1.84□□□□□ -2.11
SNC1YAL030W YGL242CP53066 181 aa1.84□□□□□ -2.11
SNC1YAL030W YGR266WP53326 701 aa1.84□□□□□ -2.11
SNC1YAL030W HCH1P53834 153 aa1.84□□□□□ -2.11
SNC1YAL030W VAC7P53950 1165 aa1.84□□□□□ -2.11
SNC1YAL030W SUR7P54003 302 aa1.84□□□□□ -2.11
SNC1YAL030W SKI8Q02793 397 aaPredicted RBP1.84□□□□□ -2.11
SNC1YAL030W YPL080CQ02826 108 aa1.84□□□□□ -2.11
SNC1YAL030W YPL077CQ02831 240 aa1.84□□□□□ -2.11
SNC1YAL030W RNH1Q04740 348 aa1.84□□□□□ -2.11
SNC1YAL030W FAR10Q06001 478 aa1.84□□□□□ -2.11
SNC1YAL030W DTD1Q07648 150 aaKnown RBP1.84□□□□□ -2.11
SNC1YAL030W YLL007CQ07799 665 aa1.84□□□□□ -2.11
SNC1YAL030W TLG2Q08144 397 aa1.84□□□□□ -2.11
SNC1YAL030W RDL2Q08742 149 aaKnown RBP1.84□□□□□ -2.11
SNC1YAL030W YOR387CQ08910 206 aa1.84□□□□□ -2.11
SNC1YAL030W RUD3Q12234 484 aaKnown RBP1.84□□□□□ -2.11
SNC1YAL030W MED4Q12343 284 aa1.84□□□□□ -2.11
SNC1YAL030W NAG1Q8TGN9 163 aa1.84□□□□□ -2.11
SNC1YAL030W SSK22P25390 1331 aaPredicted RBP1.84□□□□□ -2.12
SNC1YAL030W STE7P06784 515 aa1.83□□□□□ -2.12
SNC1YAL030W PHO2P07269 559 aa1.83□□□□□ -2.12
SNC1YAL030W AAT2P23542 418 aaKnown RBP1.83□□□□□ -2.12
SNC1YAL030W CSM1P25651 190 aa1.83□□□□□ -2.12
SNC1YAL030W NAM9P27929 486 aa1.83□□□□□ -2.12
SNC1YAL030W ZRT1P32804 376 aa1.83□□□□□ -2.12
SNC1YAL030W SKG6P32900 734 aaPredicted RBP1.83□□□□□ -2.12
SNC1YAL030W RPT5P33297 434 aaKnown RBP1.83□□□□□ -2.12
SNC1YAL030W CSE2P33308 149 aa1.83□□□□□ -2.12
SNC1YAL030W MCH2P36032 473 aa1.83□□□□□ -2.12
SNC1YAL030W SWD2P36104 329 aaPredicted RBP1.83□□□□□ -2.12
SNC1YAL030W RPC37P36121 282 aa1.83□□□□□ -2.12
SNC1YAL030W TAE1P38340 232 aa1.83□□□□□ -2.12
SNC1YAL030W SMF2P38778 549 aa1.83□□□□□ -2.12
SNC1YAL030W KRE9P39005 276 aa1.83□□□□□ -2.12
SNC1YAL030W YNL208WP40159 199 aaKnown RBP1.83□□□□□ -2.12
SNC1YAL030W YPI1P43587 155 aa1.83□□□□□ -2.12
SNC1YAL030W BIR1P47134 954 aa1.83□□□□□ -2.12
SNC1YAL030W YGL260WP53056 76 aa1.83□□□□□ -2.12
SNC1YAL030W SED5Q01590 340 aa1.83□□□□□ -2.12
SNC1YAL030W SPP2Q02521 185 aa1.83□□□□□ -2.12
SNC1YAL030W SRL4Q03085 281 aa1.83□□□□□ -2.12
SNC1YAL030W FSH2Q05015 223 aa1.83□□□□□ -2.12
SNC1YAL030W YHC1Q05900 231 aaKnown RBP1.83□□□□□ -2.12
SNC1YAL030W BOP2Q06150 570 aa1.83□□□□□ -2.12
SNC1YAL030W YLR173WQ06247 608 aa1.83□□□□□ -2.12
SNC1YAL030W MRX9Q07349 420 aaKnown RBP1.83□□□□□ -2.12
SNC1YAL030W YPQ1Q12010 308 aa1.83□□□□□ -2.12
SNC1YAL030W MCT1Q12283 360 aa1.83□□□□□ -2.12
SNC1YAL030W IZH2Q12442 317 aa1.83□□□□□ -2.12
SNC1YAL030W SAL1D6W196 494 aa1.82□□□□□ -2.12
SNC1YAL030W COX2P00410 251 aa1.82□□□□□ -2.12
SNC1YAL030W MSF1P08425 469 aa1.82□□□□□ -2.12
SNC1YAL030W UNG1P12887 359 aa1.82□□□□□ -2.12
SNC1YAL030W IFM1P25038 676 aa1.82□□□□□ -2.12
SNC1YAL030W RVS161P25343 265 aaKnown RBP1.82□□□□□ -2.12
SNC1YAL030W RPL16BP26785 198 aaKnown RBP1.82□□□□□ -2.12
SNC1YAL030W ZIP1P31111 875 aa1.82□□□□□ -2.12
SNC1YAL030W DEP1P31385 405 aa1.82□□□□□ -2.12
SNC1YAL030W COS9P36034 407 aa1.82□□□□□ -2.12
SNC1YAL030W SHE1P38200 338 aa1.82□□□□□ -2.12
SNC1YAL030W BMT2P38278 337 aa1.82□□□□□ -2.12
SNC1YAL030W HSM3P38348 480 aa1.82□□□□□ -2.12
SNC1YAL030W TDA11P38854 504 aa1.82□□□□□ -2.12
SNC1YAL030W CHL4P38907 458 aa1.82□□□□□ -2.12
SNC1YAL030W SOP4P39543 234 aaPredicted RBP1.82□□□□□ -2.12
SNC1YAL030W NPT1P39683 429 aaKnown RBP1.82□□□□□ -2.12
SNC1YAL030W AIM10P39965 576 aaKnown RBP1.82□□□□□ -2.12
SNC1YAL030W SLM1P40485 686 aa1.82□□□□□ -2.12
SNC1YAL030W AGX1P43567 385 aa1.82□□□□□ -2.12
SNC1YAL030W AIM23P47015 356 aa1.82□□□□□ -2.12
SNC1YAL030W UBC13P52490 153 aa1.82□□□□□ -2.12
SNC1YAL030W SWC4P53201 476 aa1.82□□□□□ -2.12
SNC1YAL030W VHT1P53241 593 aa1.82□□□□□ -2.12
SNC1YAL030W LSB1P53281 241 aa1.82□□□□□ -2.12
SNC1YAL030W CRH1P53301 507 aa1.82□□□□□ -2.12
SNC1YAL030W PRP38Q00723 242 aaPredicted RBP1.82□□□□□ -2.12
SNC1YAL030W SNX41Q04053 625 aa1.82□□□□□ -2.12
SNC1YAL030W COX20Q04935 205 aa1.82□□□□□ -2.12
SNC1YAL030W GPN3Q06543 272 aa1.82□□□□□ -2.12
SNC1YAL030W PBP4Q07362 185 aaKnown RBP1.82□□□□□ -2.12
SNC1YAL030W RSA1Q08932 381 aa1.82□□□□□ -2.12
SNC1YAL030W TAF10Q12030 206 aa1.82□□□□□ -2.12
SNC1YAL030W ATP16Q12165 160 aa1.82□□□□□ -2.12
SNC1YAL030W UTP23Q12339 254 aaKnown RBP1.82□□□□□ -2.12
SNC1YAL030W RPL31AP0C2H8 113 aaKnown RBP1.81□□□□□ -2.12
SNC1YAL030W ISY1P21374 235 aaPredicted RBP1.81□□□□□ -2.12
SNC1YAL030W YSR3P23501 404 aa1.81□□□□□ -2.12
SNC1YAL030W RRT12P25381 491 aa1.81□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 76.2 ms